CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25 Identity = 62/129 (48.06%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++E++K+ G +ILFIDE+HT++G+G +G+ +D NLLKP L RGEL I +TT DE+R E DKAL RRFQ VL++EP+ ED + IL GL+E++E HH A+ AA LS R Sbjct: 258 EERLKAVLNEVKKADGQIILFIDELHTIVGAGKT----EGS-MDAGNLLKPMLARGELHLIGATTLDEYRKYMETDKALERRFQKVLVTEPTVEDTISILRGLKERFEIHHGVTIHDNALVAAATLSNR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25 Identity = 64/130 (49.23%), Postives = 82/130 (63.08%), Query Frame = 3 Query: 3 EARVTTLISEI-QKSGDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ Q G I+FIDE+HT+ G+G K G +D N+LKP+L RGEL CI +TT DE+R EKD AL RRFQ VL+ EP E + IL GL+E+YE HH + T AI AA LS R Sbjct: 255 EERLKAVLKELAQDDGQNIVFIDELHTMAGAG------KAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHR 378
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_CORGL (Chaperone protein clpB OS=Corynebacterium glutamicum GN=clpB PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.621e-25 Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 3 EARVTTLISEIQ-KSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EI+ +G+V+ FIDE+HT++G+G G + +D N++KP L RGEL+ + +TT +E+R EKD AL RRFQ V + EP+ EDA+ IL GL+E+YE HH + A+ AA LS R Sbjct: 257 EERLKAVLDEIKGANGEVVTFIDELHTIVGAGASGE----SAMDAGNMIKPLLARGELRLVGATTLNEYRKYIEKDAALERRFQQVYVGEPTVEDAIGILRGLKERYEVHHGVRIQDSALVAAAELSNR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_COREF (Chaperone protein clpB OS=Corynebacterium efficiens GN=clpB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.729e-25 Identity = 58/129 (44.96%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 3 EARVTTLISEIQ-KSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EI+ +G+++ FIDE+HT++G+G G + +D N++KP L RGEL+ + +TT +E+R EKD AL RRFQ V + EPS ED V IL GL+E+YE HH + A+ AA LS R Sbjct: 257 EERLKAVLDEIKGANGEIVTFIDELHTIVGAGASGE----SAMDAGNMIKPLLARGELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVGILRGLKERYEVHHGVRIQDSALVAAAELSHR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_STAES (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25 Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+++S G +ILFIDE+H L+G+G +D N+LKP L RGEL CI +TT +E+R EKD AL RRFQ V +SEP ED + IL GL+E+YE +H + A+ AA LS R Sbjct: 255 EERLKAVLKEVKESEGRIILFIDEIHMLVGAGKTDGA-----MDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDR 378
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_STAEQ (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25 Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+++S G +ILFIDE+H L+G+G +D N+LKP L RGEL CI +TT +E+R EKD AL RRFQ V +SEP ED + IL GL+E+YE +H + A+ AA LS R Sbjct: 255 EERLKAVLKEVKESEGRIILFIDEIHMLVGAGKTDGA-----MDAGNMLKPMLARGELHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTISILRGLKERYEVYHGVRIQDRALVAAAELSDR 378
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_MYCGE (Chaperone protein clpB OS=Mycoplasma genitalium GN=clpB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25 Identity = 57/129 (44.19%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ T++ ++++S G +ILFIDE+H ++G +GR + +DI+N+LKP L RGE++ I +TT E+R EKD AL RRFQ +LI+EPS ++A+ I+ GL+ ++E HN A+ AAV +S R Sbjct: 110 EKRINTILKQVKESNGRIILFIDEIHQIVG---LGRNSSSGAMDIANILKPMLARGEIKVIGATTLKEYREYIEKDGALERRFQKILINEPSSQEALTIMRGLKTRWELFHNITIFDSALVAAVEMSTR 235
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BACCR (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25 Identity = 64/130 (49.23%), Postives = 85/130 (65.38%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSG-TVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++EI+KS G ++LFIDE+HT++G+G T G +D N+LKP L RGEL CI +TT DE+R EKD AL RRFQ VL EP+ ED + IL GL+E++E +H AI AA LS R Sbjct: 259 EERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG------AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDR 382
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BACC1 (Chaperone protein clpB OS=Bacillus cereus (strain ATCC 10987) GN=clpB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25 Identity = 64/130 (49.23%), Postives = 85/130 (65.38%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSG-TVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++EI+KS G ++LFIDE+HT++G+G T G +D N+LKP L RGEL CI +TT DE+R EKD AL RRFQ VL EP+ ED + IL GL+E++E +H AI AA LS R Sbjct: 259 EERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG------AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDR 382
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BACAN (Chaperone protein clpB OS=Bacillus anthracis GN=clpB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.176e-25 Identity = 64/130 (49.23%), Postives = 85/130 (65.38%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSG-TVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++EI+KS G ++LFIDE+HT++G+G T G +D N+LKP L RGEL CI +TT DE+R EKD AL RRFQ VL EP+ ED + IL GL+E++E +H AI AA LS R Sbjct: 259 EERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEG------AMDAGNMLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDR 382 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |