CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_VIBCH (Chaperone protein clpB OS=Vibrio cholerae GN=clpB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 66/130 (50.77%), Postives = 91/130 (70.00%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++++E+ K G++ILFIDE+HT++G+G KG G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ VL+ EP+ ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKSVLNELAKEEGNIILFIDELHTMVGAG------KGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RICFE (Chaperone protein clpB OS=Rickettsia felis GN=clpB PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EI++S G++ILFIDE+H L+G+G +D SNLLKP L RGEL CI +TT DE+R EKD ALARRFQPV +SEP+ D + IL G++EKYE HH + + AI AA LS R Sbjct: 257 EERLKAVLGEIKESSGEIILFIDELHLLVGTGKTDGA-----MDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTASDTISILRGIKEKYELHHAVRISDSAIVAAATLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RICBR (Chaperone protein clpB OS=Rickettsia bellii (strain RML369-C) GN=clpB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EI++S G++ILFIDE+H L+G+G +D SNLLKP L RGEL CI +TT DE+R EKD A ARRFQPV +SEP+ ED + IL G++EKYE HH + + AI AA LS R Sbjct: 257 EERLKAVLGEIKESSGEIILFIDELHLLVGTGKTDGA-----MDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAAFARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_PSEPK (Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 67/130 (51.54%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +L++E+ K G +ILFIDE+HT++G+G KG G +D N+LKP+L RGEL C+ +TT +E+R EKD AL RRFQ VL+ EPS+ED + IL GL+E+YE HH T AI AA LS R Sbjct: 256 EERLKSLLNELSKQEGQIILFIDELHTMVGAG------KGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379 HSP 2 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V ++IA V S W+GIPV ++ ER L+ +EE L +RVIGQ EAV A++ AV+RSR GL DP Sbjct: 531 VTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDP 594
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_PROMM (Chaperone protein clpB OS=Prochlorococcus marinus (strain MIT 9313) GN=clpB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28 Identity = 63/129 (48.84%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ S G ++LFIDE+HT++G+G G +D SNLLKP L RGEL+CI +TT DEHR EKD AL RRFQ VL+ +P+ +D + IL GL+E+YE HH + A+ AA LS+R Sbjct: 257 EERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGA-----MDASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVQDTISILRGLKERYEVHHGVRIADNALVAAAVLSSR 380 HSP 2 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V DDIA V + W+GIPV ++ E L+GLE +L +RVIGQ++AV A++ A++RSR GL DP Sbjct: 537 VTEDDIADVIAKWTGIPVAKLVQSEMEKLLGLEAELHQRVIGQEQAVQAVADAIQRSRAGLSDP 600
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BDEBA (Chaperone protein clpB OS=Bdellovibrio bacteriovorus GN=clpB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 69/130 (53.08%), Postives = 88/130 (67.69%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSG-TVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +I E+ S G +ILFIDE+HTL+G+G T G +D LLKP+L RGEL+CI +TT DE+R EKD AL RRFQ V++ EPS EDA+ IL GL+EKYE HH + T A+ +AV LS R Sbjct: 252 EDRLKAVIKEVTSSDGQIILFIDELHTLVGAGKTEG------AMDAGQLLKPALARGELRCIGATTLDEYRKYIEKDAALERRFQTVMVEEPSVEDAITILRGLKEKYEVHHGIRITDAALVSAVKLSHR 375
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB2_CHLTE (Probable chaperone protein clpB 2 OS=Chlorobium tepidum GN=clpB2 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.570e-28 Identity = 67/129 (51.94%), Postives = 90/129 (69.77%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ L+ E+Q S G+VILFIDE+H L+G+G+ +G+ +D +N+LKP+L RGEL+CI +TT DE+R EKD AL RRFQ V++ +PS ED V IL GL+EKYE HH + A+ AA LS R Sbjct: 259 EERLKALVKEVQASDGEVILFIDELHLLVGAGSA----EGS-MDAANILKPALARGELRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTVSILRGLKEKYEIHHGVRIKDAALVAAAELSNR 382
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_SHEON (Chaperone protein clpB OS=Shewanella oneidensis GN=clpB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 66/130 (50.77%), Postives = 90/130 (69.23%), Query Frame = 3 Query: 3 EARVTTLISEI-QKSGDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++E+ Q+ G VILFIDE+HT++G+G KG G +D N+LKP+L RG+L C+ +TT DE+R EKD AL RRFQ VL+ EPS ED + IL GL+E+YE HH+ + T AI AA +S R Sbjct: 256 EERLKAVLNELAQEEGQVILFIDELHTMVGAG------KGDGAMDAGNMLKPALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNPX (Chaperone protein clpB 1 OS=Synechococcus sp. (strain WH8102) GN=clpB1 PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 63/129 (48.84%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ S G ++LFIDE+HT++G+G G +D SNLLKP L RGEL+CI +TT DEHR EKD AL RRFQ VL+ +P+ D + IL GL+E+YE HH + A+ AA LS+R Sbjct: 257 EERLKAVLKEVTTSDGQIVLFIDEIHTVVGAGA-----SGGAMDASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTISILRGLKERYEVHHGVRIADSALVAAAMLSSR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 62/122 (50.82%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAA 368 E R+ +I EI+ + +VIL IDEVHTLIG+G +D +N+LKP+L RGE+QCI +TT +E+R EKD AL RRFQPV++ EPS E+ + IL GLR++YE HH + EA++AA Sbjct: 257 EERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGA-----IDAANILKPALARGEMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHKLVISDEALSAA 373 HSP 2 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 449 VVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 + S + E +VV +DIA + + W+GIPV ++T E L+ +EE L R+IGQDEAV A+S+A++R+RVGLK+P Sbjct: 455 IAHSKKGDEENTKEVSVVTEEDIAQIVAAWTGIPVNKMTRSESEKLLQMEETLHGRIIGQDEAVVAVSKAIRRARVGLKNP 535 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |