CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_SHIFL (Chaperone protein clpB OS=Shigella flexneri GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++++ K G+VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ V ++EPS ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKGVLNDLAKQEGNVILFIDELHTMVGAG------KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_SALTY (Chaperone protein clpB OS=Salmonella typhimurium GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++++ K G+VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ V ++EPS ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKGVLNDLAKQEGNVILFIDELHTMVGAG------KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_SALTI (Chaperone protein clpB OS=Salmonella typhi GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++++ K G+VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ V ++EPS ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKGVLNDLAKQEGNVILFIDELHTMVGAG------KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RALSO (Chaperone protein clpB OS=Ralstonia solanacearum GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 67/130 (51.54%), Postives = 85/130 (65.38%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++++I K G ILFIDE+HT++G+G K G +D N+LKP+L RGEL CI +TT DE+R EKD AL RRFQ VL+ EPS E + IL GL+EKYE HH + T AI AA LS R Sbjct: 255 EERLKAVLNDIAKEEGQTILFIDEIHTMVGAG------KAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_PROFR (Chaperone protein clpB (Fragment) OS=Propionibacterium freudenreichii subsp. shermanii GN=clpB PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 66/129 (51.16%), Postives = 89/129 (68.99%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++EI+ + G +I FIDE+HT++G+G ++G+ +D SN+LKP L RGEL+ I +TT DE+R EKD AL RRFQ V + EPS ED V IL GLRE+YEAHH + T A+ AA LS R Sbjct: 257 EERLKAVLNEIKSAEGQIITFIDELHTVVGAGA----SEGS-MDASNMLKPLLARGELRLIGATTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVAILRGLRERYEAHHKVRITDSALVAAAQLSHR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_ECOLI (Chaperone protein clpB OS=Escherichia coli (strain K12) GN=clpB PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++++ K G+VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ V ++EPS ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKGVLNDLAKQEGNVILFIDELHTMVGAG------KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_ECOL6 (Chaperone protein clpB OS=Escherichia coli O6 GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++++ K G+VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ V ++EPS ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKGVLNDLAKQEGNVILFIDELHTMVGAG------KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_ECO57 (Chaperone protein clpB OS=Escherichia coli O157:H7 GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++++ K G+VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ V ++EPS ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKGVLNDLAKQEGNVILFIDELHTMVGAG------KADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_DICNO (Chaperone protein clpB OS=Dichelobacter nodosus GN=clpB PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ EI K+ G +ILFIDE+HT++G+G ++G+ LD N+LKP+L RG+L CI +TT DE+R EKD AL RRFQ V++ EPS ED + IL L+E+YE HH T A+ AA LS R Sbjct: 260 EERLKAVLDEITKADGQIILFIDEIHTMVGAGK----SEGS-LDAGNMLKPALARGDLHCIGATTLDEYRQYMEKDAALERRFQKVIVDEPSVEDTIAILRNLQERYEVHHGINITDPALVAAAQLSHR 383
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_AQUAE (Chaperone protein clpB OS=Aquifex aeolicus GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27 Identity = 60/128 (46.88%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ L+ E+++ G+VILFIDE+HT++G+G +D +N++KP+L RGE++ I +TT DE+R EKD AL RRFQPV + EP++E + IL GLR + E H K + EAI AAV L+ R Sbjct: 390 EERLKALLDEVKEKGNVILFIDEIHTVVGAGAAEGA-----VDAANIMKPALARGEIRVIGATTVDEYRKYIEKDPALERRFQPVFVDEPTEEQTIEILKGLRPRLEQFHKVKISDEAIEAAVKLTKR 512 HSP 2 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 32/65 (49.23%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 497 VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 VV DD+A V S W+GIPV ++ +E L+ LE++L KRV+ Q+ AV A++ A++R+R GLKDP Sbjct: 651 VVTWDDVAEVVSEWTGIPVSRLKEEEMQKLLKLEDELHKRVVDQEHAVKAVAEAIRRARAGLKDP 715 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |