CX295713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295713 vs. ExPASy Swiss-Prot
Match: ABCA3_DICDI (ABC transporter A family member 3 OS=Dictyostelium discoideum GN=abcA3 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 37 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 294 G+P + LDE S G+DP+ RFMW VI+ L + +ILTTHSM E A+C R+ IM G++ C+GS QH+K +FG+ ++VK Sbjct: 1445 GNPSVCFLDEVSAGVDPVVARFMWNVITELKKDK---VIILTTHSMLECSAVCDRLTIMKSGKMMCLGSIQHIKDKFGSGYSIDVK 1527
BLAST of CX295713 vs. ExPASy Swiss-Prot
Match: ABCA5_DICDI (ABC transporter A family member 5 OS=Dictyostelium discoideum GN=abcA5 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16 Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 10 EASCRIGTRGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 294 + S I G+P +V++DE S+G DPI + +VIS L + +ILT+HSM+E QALC+R+ IM GQ +C+GS QH+K++FG +EVK Sbjct: 1466 KVSLSIAMLGNPSVVLIDEASSGCDPIIRYRQCQVISELGKNK---VIILTSHSMSEIQALCSRMTIMRDGQFKCLGSTQHIKSKFGAGYSVEVK 1557
BLAST of CX295713 vs. ExPASy Swiss-Prot
Match: ABCA4_DICDI (ABC transporter A family member 4 OS=Dictyostelium discoideum GN=abcA4 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.258e-16 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 10 EASCRIGTRGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 294 + S I G P I++LDE S G+D KRFMW V+ L + A+ILTTHS+ E QA+C ++ IM G+L+ +GS QH+K +FG+ +EVK Sbjct: 1437 KVSLSIACIGSPSILLLDEISCGVDACVKRFMWNVLMELKKNK---AIILTTHSIAECQAVCDKLTIMKDGKLQALGSNQHIKDKFGSGYSIEVK 1528
BLAST of CX295713 vs. ExPASy Swiss-Prot
Match: ABCA9_DICDI (ABC transporter A family member 9 OS=Dictyostelium discoideum GN=abcA9 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 16 SCRIGTRGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTE 303 S + GD I+ LDEPSTG+ +R +W I+ L + ++ILTTHSM EA L +RI I+ G+L+CIG+ HLK +FG+ + + E Sbjct: 673 SFAVAMTGDSSIIFLDEPSTGISSELRRDLWRTINDLKKNR---SIILTTHSMEEADVLSSRIAIISQGKLQCIGTQNHLKAKFGDGYSVRINVEE 765
BLAST of CX295713 vs. ExPASy Swiss-Prot
Match: CED7_CAEEL (ABC transporter ced-7 OS=Caenorhabditis elegans GN=ced-7 PE=1 SV=6) HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13 Identity = 39/102 (38.24%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 49 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQERV 354 ++ILDEP+ G+DP A+R +WE++ +A++LT+HSM+E +ALC+RI ++ G L IGS Q LK+ +GN + + E + D+ + Q++Q R+ Sbjct: 1523 MIILDEPTAGIDPKARREVWELLL-WCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRDM--VVQLVQTRL 1621
BLAST of CX295713 vs. ExPASy Swiss-Prot
Match: ABCA6_DICDI (ABC transporter A family member 6 OS=Dictyostelium discoideum GN=abcA6 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 10 EASCRIGTRGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 294 + S + G+P + LDE S G D + +R +W+VIS L + ++ILT+HSM+E +ALC+RI IM G+ C+ + Q +K RFG ++VK Sbjct: 1453 KVSLSMAMLGNPSVCFLDEISCGCDAVVRRQLWDVISELGKDK---SIILTSHSMSEVEALCSRITIMKEGKYTCLNTIQGVKNRFGAGYSIDVK 1544 HSP 2 Score: 67.781 bits (164), Expect = 7.030e-11 Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 37 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 270 G I+ LDE ++GMDP+++R +W+ + L ++GKT +ILTTH + EA L RI I+ G+LRC G+ LK RFG Sbjct: 642 GRSKIIFLDEVTSGMDPVSRRQVWDFL--LKYKKGKT-IILTTHYLEEADYLGDRIAIISQGKLRCDGTSLFLKNRFG 716
BLAST of CX295713 vs. ExPASy Swiss-Prot
Match: ABCA7_DICDI (ABC transporter A family member 7 OS=Dictyostelium discoideum GN=abcA7 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.359e-12 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 16 SCRIGTRGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN 273 S I G+ I+ LDEP+TG+ ++ +W I+ L + ++ILTTHSM EA L RI I+ G+L+CIG+ HLK +FG+ Sbjct: 667 SFAIAMTGESSIIFLDEPTTGLSIETRKDLWGTINELKKNR---SIILTTHSMQEADILSDRIAIVSQGKLQCIGTQTHLKQKFGD 749
BLAST of CX295713 vs. ExPASy Swiss-Prot
Match: NODI_RHIEC (Nod factor export ATP-binding protein I OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=nodI PE=3 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.156e-11 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 40 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 255 DP ++++DEP+TG+DP A+ +WE + L TR GKT +ILTTH M EA+ LC R+ ++ GG+ G P L Sbjct: 166 DPQLLVMDEPTTGLDPHARHLIWERLRSLLTR-GKT-IILTTHFMEEAERLCDRLCVLEGGRSIAEGRPHDL 235 The following BLAST results are available for this feature:
BLAST of CX295713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295713 ID=CX295713; Name=CX295713; organism=Citrus clementina; type=EST; length=737bpback to top |