CX295719

Overview
NameCX295719
Unique NameCX295719
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGLA_PAEPO (Beta-glucosidase A OS=Paenibacillus polymyxa GN=bglA PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.297e-24
Identity = 65/203 (32.02%), Postives = 103/203 (50.74%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYP-FIMRTLVRERLPKFANEQSVMLKGS-FDFIGMNYYS 619
            NG++PF T++HWDLPQAL+D  GG+ + R +  F  +AE  F+EF  +++HW+T NEP   +      G  APG              +      VGHH L++H  +V+ ++E   +   G+IGI     W VPYS  + +  A  R +      ++ P+  G+YP F++     +       +  + + G   D IG+NYYS
Sbjct:  111 NGIEPFCTLYHWDLPQALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGL------------TNLQTAIDVGHHLLVAHGLSVRRFRELGTS---GQIGIAPNVSWAVPYSTSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYS 297          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: GMUD_BACSU (6-phospho-beta-glucosidase gmuD OS=Bacillus subtilis GN=gmuD PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.177e-23
Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRER--LPKF-ANEQSVMLKGSFDFIGMNYY 616
            NG++PFV +FH+D+P AL+   GG+++   V  +++YA  CF+ FG RVK W T NEP      GY      P +                E   VG H +LS A A++ Y+E     Q GKIGI L      P S+   +V+A + A  FF   ++DP + G +P  +  +++    +P + A +  ++ K + D +G+NYY
Sbjct:  115 NGIEPFVNLFHFDMPMALQK-IGGWVNRETVDAYENYARTCFRLFGGRVKKWFTHNEPIVPVEGGYLYDFHYPNKV------------DFKEAVQVGFHTMLSSARAIQAYREMK---QDGKIGIILNLTPSYPRSSHPADVKAGEIADAFFNRSFLDPSVKGEFPKELVDILKHEGFMPDYNAEDLDIIKKNTVDLLGVNYY 301          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGLB_PAEPO (Beta-glucosidase B OS=Paenibacillus polymyxa GN=bglB PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.797e-22
Identity = 71/209 (33.97%), Postives = 98/209 (46.89%), Query Frame = 2
Query:   14 LNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKFANEQSVMLKGSF-------DFIGMNYYS 619
            L GL P +T++HWDLPQ +ED+ GG+     +  F+ YA +    FG+R+  W T+NEP+  S  GY  G  APG    W            E +   HH L+ H  A  ++KEK      GKIGITL  + +   S    +V AA R   F    + +PL  G YP  M     E    + N    +  G         DF+G+NYY+
Sbjct:  111 LAGLIPMLTLYHWDLPQWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH-ENW-----------REAFTAAHHILMCHGIASNLHKEKGLT---GKIGITLNMEHVDAASERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDM----VEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYT 299          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGLA_CLOTH (Beta-glucosidase A OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.004e-22
Identity = 72/215 (33.49%), Postives = 106/215 (49.30%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRER--LPKFANEQSVMLKGSFDFIGMNYYSSNYAVDIPVANS 655
            NG+ P +T++HWDLPQ L+D  GG+ +      F +Y+E+ FK  GD V  W T NEP   S  G+  G  APG          +   +S E   V H+ LLSH  AVK+++E     Q   IGI L   +  P S +  ++EAA+ +       Y+DP++ G YP     L +++     F  +   ++    DFI  N YSS +    P + S
Sbjct:  111 NGIMPAITLYHWDLPQKLQDK-GGWKNRDTTDYFTEYSEVIFKNLGDIVPIWFTHNEPGVVSLLGHFLGIHAPG---------IKDLRTSLE---VSHNLLLSHGKAVKLFREMNIDAQ---IGIALNLSYHYPASEKAEDIEAAELSFSLAGRWYLDPVLKGRYPENALKLYKKKGIELSFPEDDLKLISQPIDFIAFNNYSSEFIKYDPSSES 309          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: LACG_LACRH (6-phospho-beta-galactosidase OS=Lactobacillus rhamnosus GN=lacG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 69/212 (32.55%), Postives = 105/212 (49.53%), Query Frame = 2
Query:   23 LQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLP-------KFANEQSVMLKGS---FDFIGMNYYSSNY 628
            L PFVT+ H+D P+ L    G +LS  ++ DF +YA  CF+EF + +KHWIT+NEP S +   Y  GT  P     + +K  QA           H+Q+++HA  V +YK        G+IGI        PYS+   +  AAD        +Y+D  + G+Y      L++E L        K+ +E+   +K +    DF+G+N Y S +
Sbjct:  108 LIPFVTLHHFDTPERLHA-IGDWLSQEMLEDFVEYARFCFEEFPE-IKHWITINEPTSMAVQQYTSGTFPPAETGHF-DKTFQA----------EHNQIVAHARIVNLYKSMG---LDGEIGIVHALQTPYPYSDSSEDQHAADLQDALENRLYLDGTLAGDYAPKTLALIKEILAANQQPMFKYTDEEMAAIKKAAHQLDFVGVNNYFSKW 303          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGLS_CALSA (Beta-glucosidase A OS=Caldocellum saccharolyticum GN=bglA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.424e-19
Identity = 68/213 (31.92%), Postives = 105/213 (49.30%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITL------ISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYP-----FIMRTLVRERLPKFANEQSVMLKGSF-DFIGMNYYS 619
            NG++P VT++HWDLPQ L+D  GG+ +P IV  + DYA L    + D+VK WIT NEP+  +  GY  G  APG   K    A            V H  +LSH   VK  KE    ++   +GITL      +    + Y   +   E    +      +++DP++ G+YP     ++++  + +     + +Q V     F DF+G+NYY+
Sbjct:  110 NGIEPVVTLYHWDLPQKLQD-IGGWANPEIVNYYFDYAMLVINRYKDKVKKWITFNEPYCIAFLGYFHGIHAPG--IKDFKVAMD----------VVHSLMLSHFKVVKAVKENNIDVE---VGITLNLTPVYLQTERLGYKVSEIEREMVSLSSQLDNQLFLDPVLKGSYPQKLLDYLVQKDLLDSQKALSMQQEVKENFIFPDFLGINYYT 306          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: LACG_CLOAB (6-phospho-beta-galactosidase OS=Clostridium acetobutylicum GN=lacG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.143e-19
Identity = 69/215 (32.09%), Postives = 107/215 (49.77%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLG--MYMDPLIYGNYPFIMRTLVRERLPK-------FANEQSVMLKGS--FDFIGMNYYSSNY 628
            N ++PFVT+ H+D P  L  D G +L+   +  F  +A++CF+  GDRVK WIT NE  + + NGY  G + P      + KA Q+           H+ +++HA  V++YK        G+IGI    +   P ++ K + EAA   LD+ +     +D    G YP      + E + K       +  +  V+ K S   DF+GMNYYSS++
Sbjct:  105 NNVEPFVTLHHFDTPLTLFKD-GDWLNRNNIDYFVRFAKVCFEALGDRVKKWITFNEAWAVAQNGYIIG-NFPPSIKYDIPKAAQS----------MHNMMVAHAKVVELYKSMN---LDGEIGIVHTLEGKYPITDSKEDKEAA--YLDYMISNKFMLDACFKGEYPKETEKTINEIMSKNGGELKIYDGDLEVLKKASSKIDFLGMNYYSSHF 302          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: LACG_LACCB (6-phospho-beta-galactosidase OS=Lactobacillus casei (strain BL23) GN=lacG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.412e-19
Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 2
Query:   23 LQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERL-----PKFANEQSVM-----LKGSFDFIGMNYYSSNY 628
            ++PFVT+ H+D P+ L +  G +LS  ++ DF  YA+ CF+EF + VK+WIT+NEP S +   Y  GT  P    ++ +K  QA           H+Q+++HA  V +YK        G+IGI      + PYS+   +  AA+        +Y+D  + G Y      LV+E L     P F +    M          DF+G+N Y S +
Sbjct:  108 IEPFVTLHHFDTPERLHEA-GDWLSQEMLDDFVAYAKFCFEEFSE-VKYWITINEPTSMAVQQYTSGTFPPAESGRF-DKTFQA----------EHNQMVAHARIVNLYKSMQLG---GQIGIVHALQTVYPYSDSAVDHHAAELQDALENRLYLDGTLAGEYHQETLALVKEILDANHQPMFQSTPQEMKAIDEAAHQLDFVGVNNYFSKW 303          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: LACG_LACCA (6-phospho-beta-galactosidase OS=Lactobacillus casei GN=lacG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.068e-19
Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 2
Query:   23 LQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERL-----PKFANEQSVM-----LKGSFDFIGMNYYSSNY 628
            ++PFVT+ H+D P+ L +  G +LS  ++ DF  YA+ CF+EF + VK+WIT+NEP S +   Y  GT  P    ++ +K  QA           H+Q+++HA  V +YK        G+IGI      + PYS+   +  AA+        +Y+D  + G Y      LV+E L     P F +    M          DF+G+N Y S +
Sbjct:  108 IEPFVTLHHFDTPERLHEA-GDWLSQEMLDDFVAYAKFCFEEFSE-VKYWITINEPTSMAVQQYTTGTFPPAESGRF-DKTFQA----------EHNQMVAHARIVNLYKSMQLG---GQIGIVHALQTVYPYSDSAVDHHAAELQDALENRLYLDGTLAGEYHQETLALVKEILDANHQPMFQSTPQEMKAIDEAAHQLDFVGVNNYFSKW 303          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGLS_AGRSA (Beta-glucosidase OS=Agrobacterium sp. (strain ATCC 21400) GN=abg PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.333e-17
Identity = 59/206 (28.64%), Postives = 92/206 (44.66%), Query Frame = 2
Query:   20 GLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKFANEQSVMLKGSFDFIGMNYYSSNYAVD 637
            G++ + T++HWDLP  L  D GG+ S      FQ YA+      GDR+    T NEP       +  G  APG  +     A              HH  L+H   V+  +       K  +G+ L +   +P S+ + +++AA+RA  F  G + DP+  G YP  M   + +R+P    E   ++    D+ G+NYY+     D
Sbjct:  117 GIKTYATLYHWDLPLTLMGD-GGWASRSTAHAFQRYAKTVMARLGDRLDAVATFNEPWCAVWLSHLYGVHAPGERNMEAALAAM------------HHINLAHGFGVEASRH---VAPKVPVGLVLNAHSAIPASDGEADLKAAERAFQFHNGAFFDPVFKGEYPAEMMEALGDRMPVVEAEDLGIISQKLDWWGLNYYTPMRVAD 306          
The following BLAST results are available for this feature:
BLAST of CX295719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGLA_PAEPO7.297e-2432.02Beta-glucosidase A OS=Paenibacillus polymyxa GN=bg... [more]
GMUD_BACSU6.177e-2333.006-phospho-beta-glucosidase gmuD OS=Bacillus subtil... [more]
BGLB_PAEPO1.797e-2233.97Beta-glucosidase B OS=Paenibacillus polymyxa GN=bg... [more]
BGLA_CLOTH4.004e-2233.49Beta-glucosidase A OS=Clostridium thermocellum (st... [more]
LACG_LACRH4.895e-2032.556-phospho-beta-galactosidase OS=Lactobacillus rham... [more]
BGLS_CALSA1.424e-1931.92Beta-glucosidase A OS=Caldocellum saccharolyticum ... [more]
LACG_CLOAB4.143e-1932.096-phospho-beta-galactosidase OS=Clostridium acetob... [more]
LACG_LACCB5.412e-1932.086-phospho-beta-galactosidase OS=Lactobacillus case... [more]
LACG_LACCA7.068e-1932.086-phospho-beta-galactosidase OS=Lactobacillus case... [more]
BGLS_AGRSA1.333e-1728.64Beta-glucosidase OS=Agrobacterium sp. (strain ATCC... [more]

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Properties
Property NameValue
Genbank descriptionC05075B09SK DroRLeaf1 Citrus clementina cDNA clone C05075B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295719 ID=CX295719; Name=CX295719; organism=Citrus clementina; type=EST; length=741bp
GAGGCGAGCTCCTCTCAATGGATTGCAACCCTTTGTTACTATCTTTCACT
GGGATCTTCCACAGGCCCTGGAAGATGACTATGGTGGCTTTTTAAGCCCT
CGCATTGTGGCTGATTTTCAAGACTATGCGGAGCTTTGCTTCAAAGAATT
TGGTGATCGCGTAAAGCATTGGATCACTTTAAATGAGCCACATTCATACA
GTAGTAATGGCTATAATAAGGGTACCGATGCACCAGGACGGTGTTCCAAA
TGGGTAAACAAAGCATGCCAGGCTGGGAACTCTTCCACAGAGCCTTATAT
TGTTGGCCATCATCAGCTACTTTCTCATGCAGCAGCTGTAAAAGTTTACA
AGGAAAAATACCAAGCAATTCAAAAGGGCAAGATTGGAATAACATTAATT
TCAGATTGGATGGTACCCTATTCCAATGAAAAACCTAATGTTGAGGCTGC
TGACAGAGCCCTTGATTTCTTTCTTGGAATGTATATGGATCCACTGATAT
ACGGGAATTATCCGTTCATCATGCGCACACTTGTGAGAGAAAGACTGCCA
AAATTCGCTAATGAACAATCTGTGATGCTCAAAGGATCTTTTGATTTTAT
TGGAATGAATTATTACAGTTCAAATTATGCAGTTGATATTCCTGTTGCCA
ATTCCATAAATATTAGCTATTCAACAGATTCTCAAGCTAATTTGACTGCT
GTGCGCAATGGGGAAACTTATGGTCCAAGGCTGCGTCAACT
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