CX295719

Overview
NameCX295719
Unique NameCX295719
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL36_ARATH (Putative myrosinase 6 OS=Arabidopsis thaliana GN=TGG6 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 2.491e-48
Identity = 110/245 (44.90%), Postives = 146/245 (59.59%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQ-AGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVE--AADRALDFFLGMYMDPLIYGNYPFIMRTLVR------ERLPKFANEQSVMLKGSFDFIGMNYYSSNYAVDIPVANSINISYSTDSQANLTAVRNGETYG 724
            NG++PFVTIFHWD+PQ         L P   +DF++YAEL F+ FGDRVK WITLN+P+S +  GY  G   PGRC+      C+  G+S TEPYIVGHH+LL+H  AV +Y+++YQ  Q GKIG TLI  W +P  NE  +++  AA R  DF         + G+    +RT+ +      +RLPKF  +QS +LKGS DF+G+NYY + YA   P       S  TDS   +   RNG + G
Sbjct:  130 NGIEPFVTIFHWDVPQDFRRRIWRLLKPTY-SDFKNYAELLFQRFGDRVKFWITLNQPYSLAVKGYGDGQYPPGRCTD-----CEFGGDSGTEPYIVGHHELLAHMEAVSLYRKRYQKFQGGKIGTTLIGRWFIPL-NETNDLDKAAAKREFDF--------SVLGSTG--VRTISKDNERLGDRLPKFTPKQSALLKGSLDFLGLNYYVTRYATYRPPPMPTQHSVLTDSGVTIGFERNGVSIG 357          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL04_ORYSJ (Beta-glucosidase 4 OS=Oryza sativa subsp. japonica GN=BGLU4 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 86/203 (42.36%), Postives = 129/203 (63.55%), Query Frame = 2
Query:   20 GLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKFANEQSVMLKGSFDFIGMNYYSSNY 628
            G++P+ T++HWDLP  L+   GG+LS +IV  F  YAE CF  FGDRVKHWIT+NEP   + NGY  G  APG C             +   Y+  H+Q+L+HAAAV VY+ K++A+Q G++G+ +  +W  P+S +  +  AA+R LDF LG Y+DP+ +G+YP  MR  + + LP F+ +    ++   DF+G+N+Y+S +
Sbjct:  122 GIEPYATLYHWDLPHNLQQTVGGWLSDKIVEYFALYAEACFANFGDRVKHWITINEPLQTAVNGYGIGHFAPGGCE----------GETARCYLAAHYQILAHAAAVDVYRRKFKAVQGGEVGLVVDCEWAEPFSEKTEDQVAAERRLDFQLGWYLDPIYFGDYPESMRQRLGDDLPTFSEKDKEFIRNKIDFVGINHYTSRF 314          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL46_ARATH (Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGLU46 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 91/207 (43.96%), Postives = 130/207 (62.80%), Query Frame = 2
Query:   20 GLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKF-ANEQSVMLKGSFDFIGMNYYSSNYAVD 637
            G+ PFVT+ H+D PQ LE+ +  +LS  +  DF   A++CFK FGDRVKHWIT+NEP+ + S  Y  G   P RCS      C  GNS TEP+I  H+ +L+HA A+++Y+ KYQ  QKG IGI + + W  P S+   +  AA+RA  F+    +DP++YG YP  M  L+   LPKF +NE + ++    DF+G+N+Y+S +  D
Sbjct:  143 GITPFVTLNHFDYPQELENRFKSWLSSEMQKDFGYLADICFKHFGDRVKHWITINEPNQHISLAYRSGLFPPARCSMPYGN-CTHGNSETEPFIAAHNMILAHAKAIQIYRTKYQREQKGIIGIVVQTSWFEPISDSIADKNAAERAQSFYSNWILDPVVYGKYPEEMVNLLGSALPKFSSNEMNSLMSYKSDFLGINHYTSYFIQD 348          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL16_ORYSJ (Beta-glucosidase 16 OS=Oryza sativa subsp. japonica GN=BGLU16 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.331e-46
Identity = 97/236 (41.10%), Postives = 138/236 (58.47%), Query Frame = 2
Query:   20 GLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKFANEQSVMLKGS-FDFIGMNYYSSNYAVDIPVANSINISYSTDSQANLTAVRNGETYG 724
            G+QPFVT+ H+D+P  LE  YGG+L   I  +F+ Y+++CF  FGDRV+ W T NEP+  + + Y  G   P  CS      C +G+S  EPY   H+ LLSHAAAV  YK  YQA Q G IGI +   W  P +N   +V AA RAL F +  ++DP+ +G+YP  MR ++   LPKF  E+  +L+ +  DFIG+N+Y++ YA D   +     +Y  ++       RNG+  G
Sbjct:  141 GIQPFVTLNHFDIPHELETRYGGWLGAAIREEFEYYSDVCFNAFGDRVRFWTTFNEPNLSTRHQYILGEFPPNHCSPPFGN-CSSGDSRREPYAAAHNILLSHAAAVHNYKTNYQAKQGGSIGIVIAVKWYEPLTNSTEDVRAARRALAFEVDWFLDPIFFGDYPREMREILSSNLPKFTPEEKKLLQNNKVDFIGINHYTAIYAKDCIYSPCTLDTYEGNALVYAIGRRNGKIIG 375          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL45_ARATH (Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGLU45 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.976e-46
Identity = 92/207 (44.44%), Postives = 128/207 (61.84%), Query Frame = 2
Query:   20 GLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKF-ANEQSVMLKGSFDFIGMNYYSSNYAVD 637
            G++PFVT+ H D PQ LED +  +L+P +  +F   A++CFK FG+RVK+W TLNEP+     GY  G   P RCS      C  GNS TEP+I  H+ +L+HA AV +YK KYQ  QKG IGI + + W  P S+   + EAA+RA  F+    +DP+IYG YP  M  ++   LP+F +NE   + K   DF+G+N+Y+S +  D
Sbjct:  146 GIKPFVTLNHVDYPQELEDRFQSWLNPEMQKEFGYLADICFKHFGNRVKYWTTLNEPNQQLILGYLTGKFPPSRCSSPYGN-CSQGNSETEPFIAAHNMILAHAKAVNIYKTKYQKEQKGSIGIVVQTSWFEPISDSNADKEAAERAQSFYSNWILDPVIYGKYPKEMVDILGPALPQFSSNEVKNLEKSRADFVGINHYTSYFIQD 351          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL08_ARATH (Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU8 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.511e-45
Identity = 90/239 (37.66%), Postives = 148/239 (61.92%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKFANEQSVMLKGSFDFIGMNYYSSNYAVDIPV----ANSINISYSTDSQANLTAVRNGETY 721
            +G++P VT++H+DLPQ+LED+YGG+++ +I+ DF  +A++CF+EFG+ VK W T+NE   ++   Y K         ++ N  C  GN   E YI GH+ LL+HA+A  +YK KY++ Q+G IG+++ +  + PY+N K +  A  RA  F  G  + PL++G+YP  M+  +  RLP F+ E+S  +KGS DF+G+ +Y++ Y  + P      +S N  + TD  A + +  N  ++
Sbjct:  129 HGIEPHVTLYHYDLPQSLEDEYGGWINHKIIEDFTAFADVCFREFGEDVKLWTTINEATIFAFAFYGKDV-------RYGN--CTTGNYCMETYIAGHNMLLAHASASNLYKLKYKSKQRGSIGLSIFALGLTPYTNSKDDEIATQRAKAFLYGWMLKPLVFGDYPDEMKRTLGSRLPVFSEEESEQVKGSSDFVGIIHYTTVYVTNQPAPYIFPSSTNKDFFTDMGAYIISTGNSSSF 358          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL07_ARATH (Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU7 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.722e-44
Identity = 89/238 (37.39%), Postives = 144/238 (60.50%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKFANEQSVMLKGSFDFIGMNYYSSNYAVDIP---VANSINISYSTDSQANLTAVRNGETY 721
            +G++P VT++H+DLPQ+LED+YGG+++ +I+ DF  +A++CF+EFG+ VK W  +NE   ++   Y  G    G C           N  TE YI GH+ LL+H++A  +YK KY+  Q+G +G+++ +  + PY++ K +  A +RA  F  G  + PL+ G+YP IM+  +  RLP F+ E+S  +KGS DF+G+ +Y++ Y  + P   +  SIN  +  D  A L A  N   +
Sbjct:  130 HGIEPQVTLYHYDLPQSLEDEYGGWINRKIIEDFTAFADVCFREFGEDVKLWTKINEATLFAIGSYGDGMRY-GHCPPM---NYSTANVCTETYIAGHNMLLAHSSASNLYKLKYKTKQRGSVGLSIYAYGLSPYTDSKDDETATERAEAFLFGWMLKPLVVGDYPDIMKRTLGSRLPVFSEEESKQVKGSSDFVGVVHYNTFYVTNRPAPSLVTSINKLFFADIGAYLIAAGNASLF 363          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL09_ORYSJ (Putative beta-glucosidase 9 OS=Oryza sativa subsp. japonica GN=BGLU9 PE=5 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.851e-41
Identity = 74/117 (63.25%), Postives = 87/117 (74.36%), Query Frame = 2
Query:   14 LNGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQ 364
            L G+Q FVT+FH+D PQALED Y GFLSP I+ D++DYAE+CFKEFGDRVKHWIT NEP  + S  Y  GT APGRCS W    C  G+S  EPY   HHQLL+HA  V++Y+EKYQ
Sbjct:  149 LKGVQSFVTLFHYDTPQALEDKYNGFLSPNIINDYKDYAEICFKEFGDRVKHWITFNEPWIFCSKAYASGTYAPGRCSPWEMGKCSVGDSGREPYTACHHQLLAHAETVRLYREKYQ 265          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: BGL02_ARATH (Putative beta-glucosidase 2 OS=Arabidopsis thaliana GN=BGLU2 PE=5 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.239e-39
Identity = 86/206 (41.75%), Postives = 126/206 (61.17%), Query Frame = 2
Query:  116 FQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPY-SNEKPNVEAADRALDFFLGMYMDPLIYGNYPFIMRTLVRERLPKFANEQSVMLKGSFDFIGMNYYSSNYAVDIPVANSI--NISYSTDSQANLTAVRNGETYG 724
            F  YA++CF+EFG+ VK W T+NE + ++  GYN GT  PGRCS      C +GNSSTE YIVGH+ LL+HA+  ++Y++KY+  Q G +G +L +   +P  S+ K +  A  RA DFF G  + PL +G+YP  M+  V  RLP F+ E+S  +KGS DFIG+ +Y      +I +  S+  N  + +D   +LT + N   +G
Sbjct:   27 FTAYADVCFREFGNHVKFWTTINEANVFTIGGYNDGTSPPGRCSN-----CSSGNSSTETYIVGHNLLLAHASVSRLYQQKYKDKQGGSVGFSLYAFEFIPQTSSSKDDEIAIQRAKDFFYGWILGPLTFGDYPDEMKRAVGSRLPIFSKEESEQVKGSSDFIGIMHYFPALVENIKLKPSLSRNTDFYSDMGVSLTYLGNFSGFG 227          
BLAST of CX295719 vs. ExPASy Swiss-Prot
Match: LPH_RAT (Lactase-phlorizin hydrolase OS=Rattus norvegicus GN=Lct PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.879e-38
Identity = 90/226 (39.82%), Postives = 128/226 (56.64%), Query Frame = 2
Query:   20 GLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYS-NEKPNVEAADRALDFFLGMYMDPLI-YGNYPFIMRTLVRE----------RLPKFANEQSVMLKGSFDFIGMNYYSS--NYAVDIPVANS 655
            G+ P VTI+HWDLPQAL+D  GG+ +  IV  F++YA++ F+  GDRVK WITLNEP   ++ GY  G  APG   +            T PYI GH+ + +HA A  +Y + Y+A Q G I IT+ SDW  P     + +VEAA   + F  G +  P+   G+YP +M+T +R+          RLP+F   +   +KG+FDF G N+ ++   Y +D P A S
Sbjct: 1485 GITPQVTIYHWDLPQALQD-VGGWENETIVQRFKEYADVLFQRLGDRVKFWITLNEPFVIAAQGYGTGVSAPGISFR----------PGTAPYIAGHNLIKAHAEAWHLYNDVYRARQGGTISITISSDWGEPRDPTNREHVEAARSYVQFMGGWFAHPIFKNGDYPEVMKTRIRDRSLGAGLNKSRLPEFTESEKSRIKGTFDFFGFNHNTTVLAYNLDYPAAFS 1699          

HSP 2 Score: 136.346 bits (342), Expect = 1.622e-31
Identity = 81/215 (37.67%), Postives = 114/215 (53.02%), Query Frame = 2
Query:   17 NGLQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPG-RCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYS-NEKPNVEAADRALDFFLGMYMDPLI-YGNYPFIMR----------TLVRERLPKFANEQSVMLKGSFDFIGMNYYSS 622
            N + P VT+FHWDLPQAL+D  GG+ +P ++  F  YA+ CFK FGDRVK W+T NEP  +   GY+ G   P  +   W+            PY V H  + +HA     Y EKY++ QKG I ++L + W  P     + +VEAADR L F +G +  P+   G+YP +M+           L   RLP F  E+   ++G+ D    N Y+S
Sbjct: 1012 NNIFPMVTLFHWDLPQALQD-IGGWENPSLIELFDSYADYCFKTFGDRVKFWMTFNEPWCHVVLGYSSGIFPPSVQEPGWL------------PYKVSHIVIKAHARVYHTYDEKYRSEQKGVISLSLNTHWAEPKDPGLQRDVEAADRMLQFTMGWFAHPIFKNGDYPDVMKWTVGNRSELQHLASSRLPTFTEEEKNYVRGTADVFCHNTYTS 1213          

HSP 3 Score: 127.872 bits (320), Expect = 5.768e-29
Identity = 74/211 (35.07%), Postives = 111/211 (52.61%), Query Frame = 2
Query:   23 LQPFVTIFHWDLPQALEDDYGGFLSPRIVADFQDYAELCFKEFGDRVKHWITLNEPHSYSSNGYNKGTDAPGRCSKWVNKACQAGNSSTEPYIVGHHQLLSHAAAVKVYKEKYQAIQKGKIGITLISDWMVPYSNEKP-NVEAADRALDFFLGMYMDPL-IYGNYPFIMRTLVR---------ERLPKFANEQSVMLKGSFDFIGMNYYSS 622
            ++P  T+FHWDLPQAL++  GG+ +  +V  F DYA  CF  FGDRVK W+T +EP   S  GY  G  AP              +     + V H  L +HA    +Y   ++  Q+G++GI L SD   P   + P ++ AA+R L F LG +  P+ + G+YP     +            +LP+F   +  +LKGS DF+G+++Y+S
Sbjct:  491 IEPMATLFHWDLPQALQEQ-GGWQNESVVEAFLDYAAFCFSTFGDRVKLWVTFHEPWVMSYAGYGTGQHAPA-----------ISDPGMASFKVAHLILKAHARTWHLYDLHHRLQQQGRVGIVLNSDLAEPLDRKSPQDLAAAERFLHFMLGWFAHPIFVDGDYPTTSAQIQHINQQCGHPLAQLPEFTEAEKRLLKGSADFLGLSHYTS 689          
The following BLAST results are available for this feature:
BLAST of CX295719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
BGL36_ARATH2.491e-4844.90Putative myrosinase 6 OS=Arabidopsis thaliana GN=T... [more]
BGL04_ORYSJ3.253e-4842.36Beta-glucosidase 4 OS=Oryza sativa subsp. japonica... [more]
BGL46_ARATH4.697e-4743.96Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGL... [more]
BGL16_ORYSJ2.331e-4641.10Beta-glucosidase 16 OS=Oryza sativa subsp. japonic... [more]
BGL45_ARATH3.976e-4644.44Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGL... [more]
BGL08_ARATH1.511e-4537.66Beta-glucosidase 8 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL07_ARATH3.722e-4437.39Beta-glucosidase 7 OS=Arabidopsis thaliana GN=BGLU... [more]
BGL09_ORYSJ3.851e-4163.25Putative beta-glucosidase 9 OS=Oryza sativa subsp.... [more]
BGL02_ARATH1.239e-3941.75Putative beta-glucosidase 2 OS=Arabidopsis thalian... [more]
LPH_RAT8.879e-3839.82Lactase-phlorizin hydrolase OS=Rattus norvegicus G... [more]

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Properties
Property NameValue
Genbank descriptionC05075B09SK DroRLeaf1 Citrus clementina cDNA clone C05075B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295719 ID=CX295719; Name=CX295719; organism=Citrus clementina; type=EST; length=741bp
GAGGCGAGCTCCTCTCAATGGATTGCAACCCTTTGTTACTATCTTTCACT
GGGATCTTCCACAGGCCCTGGAAGATGACTATGGTGGCTTTTTAAGCCCT
CGCATTGTGGCTGATTTTCAAGACTATGCGGAGCTTTGCTTCAAAGAATT
TGGTGATCGCGTAAAGCATTGGATCACTTTAAATGAGCCACATTCATACA
GTAGTAATGGCTATAATAAGGGTACCGATGCACCAGGACGGTGTTCCAAA
TGGGTAAACAAAGCATGCCAGGCTGGGAACTCTTCCACAGAGCCTTATAT
TGTTGGCCATCATCAGCTACTTTCTCATGCAGCAGCTGTAAAAGTTTACA
AGGAAAAATACCAAGCAATTCAAAAGGGCAAGATTGGAATAACATTAATT
TCAGATTGGATGGTACCCTATTCCAATGAAAAACCTAATGTTGAGGCTGC
TGACAGAGCCCTTGATTTCTTTCTTGGAATGTATATGGATCCACTGATAT
ACGGGAATTATCCGTTCATCATGCGCACACTTGTGAGAGAAAGACTGCCA
AAATTCGCTAATGAACAATCTGTGATGCTCAAAGGATCTTTTGATTTTAT
TGGAATGAATTATTACAGTTCAAATTATGCAGTTGATATTCCTGTTGCCA
ATTCCATAAATATTAGCTATTCAACAGATTCTCAAGCTAATTTGACTGCT
GTGCGCAATGGGGAAACTTATGGTCCAAGGCTGCGTCAACT
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