CX295728

Overview
NameCX295728
Unique NameCX295728
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_EMENI (Triosephosphate isomerase OS=Emericella nidulans GN=tpiA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.248e-57
Identity = 113/188 (60.11%), Postives = 137/188 (72.87%), Query Frame = 3
Query:  102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 659
            VAAQN + K  GAFTGEIS + L   +I W ILGHSERR+IL E++EF+  K   A+  GL+VI C+GETLE+REA  T+DVV  Q  A A  +S   W+ +V+AYEPVWAIGTGKVAT  QAQEVH  +RKWL    S E A  TRIIYGGSV+  NCK+LA + D+DGFLVGGASLKP F+DI+ +
Sbjct:   60 VAAQNVFDKPNGAFTGEISVQQLREANIDWTILGHSERRVILKETDEFIARKTKAAIEGGLQVIFCIGETLEEREANKTIDVVTRQLNAAAKELSKEQWAKVVIAYEPVWAIGTGKVATTEQAQEVHSAIRKWLKDAISAEAAENTRIIYGGSVSEKNCKDLAKEADIDGFLVGGASLKPAFVDIVNA 247          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ENTHI (Triosephosphate isomerase OS=Entamoeba histolytica GN=TPI PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.630e-57
Identity = 119/193 (61.66%), Postives = 141/193 (73.06%), Query Frame = 3
Query:  102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSAELK 671
            V+A+N W K G A+TGE+   MLV+  +P+VILGHSERR I +ESNE V +KV  A+  GLKVIAC+GET  QR A  T +VVAAQ KAI + +S  +W NI+LAYEPVWAIGTGK ATP QAQEVH  +RKW+  N S E+A ATRI YGGSVN ANC ELA + D+DGFLVGGASL   +F  II S   K
Sbjct:   69 VSAENAWTKSG-AYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGASLDAAKFKTIINSVSEK 260          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_DEBHA (Triosephosphate isomerase OS=Debaryomyces hansenii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.630e-57
Identity = 110/196 (56.12%), Postives = 136/196 (69.39%), Query Frame = 3
Query:   72 VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 659
            V  + +    V+AQNC+ K  GA+TGEIS E + +L   W + GHSERR I+ ES++F+  K  +AL QGL VI C+GETLE+R+A  T+DV A Q  A+A  VS WS IV+AYEPVWAIGTG  ATP  AQE H  +R+ L  +   + A  TRI+YGGSVNG N  E   + DVDGFLVGGASLKPEF+DIIKS
Sbjct:   51 VNENKQKTIEVSAQNCFDKASGAYTGEISPEQIKDLGATWTLTGHSERRTIIKESDDFIASKTKFALDQGLSVILCIGETLEERKANVTLDVCARQLDAVARVVSDWSKIVVAYEPVWAIGTGLAATPEDAQETHKAIREHLSKSIGADAAEKTRILYGGSVNGKNAPEFKDKADVDGFLVGGASLKPEFVDIIKS 246          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ANOME (Triosephosphate isomerase (Fragment) OS=Anopheles merus GN=Tpi PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.630e-57
Identity = 110/179 (61.45%), Postives = 132/179 (73.74%), Query Frame = 3
Query:   60 FLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPD 596
            +L L +S L     VAAQNC+    GAFTGEIS  ML +L + WVILGHSERR I  E++E + +KVA+AL +GLKVIAC+GETL++REAG T  V   QTKAIA +V  WSN+V+AYEPVWAIGTGK ATP QAQEVH  LRKW   N S +++ A RI YGGSV  ANC+ELA +PD
Sbjct:   28 YLSLARSLLPETIGVAAQNCYKVAKGAFTGEISPAMLKDLGLGWVILGHSERRAIFGETDELIAEKVAHALGEGLKVIACIGETLQEREAGQTEAVCFRQTKAIAAQVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKWFTENVSADVSNAIRIQYGGSVTAANCRELAGKPD 206          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_TRYBB (Triosephosphate isomerase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 6.192e-57
Identity = 111/204 (54.41%), Postives = 144/204 (70.59%), Query Frame = 3
Query:   63 LGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 665
            L + K  L  P F +AAQN  + K GAFTGE+S  +L +  + W++LGHSERR    E+NE V DKVA A++ G  VIAC+GETL++RE+G T  VV  Q  AIA ++  + W+ +V+AYEPVWAIGTGKVATP QAQE H  +R W+ +    ++A   RI+YGGSVNG N + L  Q DV+GFLVGGASLKPEF+DIIK+ +
Sbjct:   48 LAMTKERLSHPKFVIAAQNA-IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIKATQ 250          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ZYGBA (Triosephosphate isomerase OS=Zygosaccharomyces bailii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.056e-56
Identity = 107/199 (53.77%), Postives = 139/199 (69.85%), Query Frame = 3
Query:   63 LGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 659
            + LVK S      V AQN ++K  GAFTGE S + + ++   WVILGHSERR    E ++ + +K A+ALSQG+ VI C+GETL+Q++AG+T+ VV  Q +A+ D+V  WSN+V+AYEPVWAIGTG  ATP  AQE+H  +R++L      + A  TRI+YGGS NG N      +PDVDGFLVGGASLKPEF+DII S
Sbjct:   51 VSLVKKS---QVSVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRQYFREDDQLIAEKTAFALSQGVGVILCIGETLDQKKAGTTLQVVERQLQAVIDKVKDWSNVVIAYEPVWAIGTGLAATPEDAQEIHHSIREFLAKKLGEKTAQETRILYGGSANGKNAVTFKDKPDVDGFLVGGASLKPEFVDIINS 246          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_HELVI (Triosephosphate isomerase (Fragment) OS=Heliothis virescens GN=Tpi PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.802e-56
Identity = 108/182 (59.34%), Postives = 135/182 (74.18%), Query Frame = 3
Query:   60 FLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV-SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVD 602
            +L  V+S +     VAAQNCW    GAFTGEIS  M+ ++   WVILGHSERR I  E ++ V +KVA+AL  GLKVIAC+GETLE+REAG T +VV  QTKA+   + ++W+N+VLAYEPVWAIGTGK A+P QAQ+VH  LR WL +N SP++AA+ RI YGGSV  AN KEL+A PD+D
Sbjct:   34 YLAYVQSIVPGTISVAAQNCWKVAKGAFTGEISPAMIKDIGANWVILGHSERRTIFGEKDDLVAEKVAHALENGLKVIACIGETLEEREAGKTEEVVFRQTKALLPAIGNNWANVVLAYEPVWAIGTGKTASPQQAQDVHASLRNWLSSNASPDVAASVRIQYGGSVTAANAKELSAFPDID 215          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 5.242e-56
Identity = 109/201 (54.23%), Postives = 141/201 (70.15%), Query Frame = 3
Query:   60 FLGL-VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 659
            +LGL V+ + +P   + AQN + K  GAFTGE  A  ++++   W + GHSERR I+ ES+EF+ +K  +AL  G+KVI C+GETLE+R+ G T+DV A Q  A++  VS WSNIV+AYEPVWAIGTG  ATP  A+E H  +R  L  +   E A  TRI+YGGSVNG N K+   + +VDGFLVGGASLKPEF+DIIKS
Sbjct:   46 YLGLAVEQNKQPTVAIGAQNVFDKSCGAFTGETCASQILDVGASWTLTGHSERRTIIKESDEFIAEKTKFALDTGVKVILCIGETLEERKGGVTLDVCARQLDAVSKIVSDWSNIVVAYEPVWAIGTGLAATPEDAEETHKGIRAHLAKSIGAEQAEKTRILYGGSVNGKNAKDFKDKANVDGFLVGGASLKPEFVDIIKS 246          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_TRYCR (Triosephosphate isomerase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.941e-56
Identity = 109/194 (56.19%), Postives = 140/194 (72.16%), Query Frame = 3
Query:   90 PDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAE 665
            P F +AAQN  + + GAFTGE+S ++L +  I WV+LGHSERRL   E+NE V +KVA A + G  VI CVGET E+REAG T  VV  Q  A+A ++S  +WS +V+AYEPVWAIGTGKVATP QAQEVH  LR+W+ +    +IAA  RI+YGGSV   N + L    D++GFLVGGASLKPEF++II++ +
Sbjct:   59 PKFQIAAQNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFVEIIEATK 251          
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_YEAST (Triosephosphate isomerase OS=Saccharomyces cerevisiae GN=TPI1 PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.168e-55
Identity = 101/191 (52.88%), Postives = 135/191 (70.68%), Query Frame = 3
Query:   87 RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 659
            +P   V AQN ++K  GAFTGE S + + ++   WVILGHSERR   +E ++F+ DK  +AL QG+ VI C+GETLE+++AG T+DVV  Q  A+ + V  W+N+V+AYEPVWAIGTG  ATP  AQ++H  +RK+L +    + A+  RI+YGGS NG+N      + DVDGFLVGGASLKPEF+DII S
Sbjct:   56 KPQVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_EMENI1.248e-5760.11Triosephosphate isomerase OS=Emericella nidulans G... [more]
TPIS_ENTHI1.630e-5761.66Triosephosphate isomerase OS=Entamoeba histolytica... [more]
TPIS_DEBHA3.630e-5756.12Triosephosphate isomerase OS=Debaryomyces hansenii... [more]
TPIS_ANOME3.630e-5761.45Triosephosphate isomerase (Fragment) OS=Anopheles ... [more]
TPIS_TRYBB6.192e-5754.41Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_ZYGBA1.056e-5653.77Triosephosphate isomerase OS=Zygosaccharomyces bai... [more]
TPIS_HELVI1.802e-5659.34Triosephosphate isomerase (Fragment) OS=Heliothis ... [more]
TPIS_CANAL5.242e-5654.23Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPIS_TRYCR8.941e-5656.19Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_YEAST1.168e-5552.88Triosephosphate isomerase OS=Saccharomyces cerevis... [more]

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Properties
Property NameValue
Genbank descriptionC05075C06SK DroRLeaf1 Citrus clementina cDNA clone C05075C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bp
CTGAAGGTCAAGTTCCATCTTCTGATGTCGTTGAGGTCGTTGTTAGCCCT
CCGTTTGTGTTTCTTGGACTGGTGAAGAGTTCGTTGAGGCCTGATTTTCA
TGTTGCGGCACAGAATTGCTGGGTCAAGAAGGGAGGTGCTTTCACCGGTG
AGATTAGTGCGGAAATGCTCGTCAATTTGGATATTCCTTGGGTCATTCTT
GGTCATTCTGAAAGGAGACTCATTTTGAATGAATCAAATGAGTTTGTTGG
GGATAAGGTTGCATATGCACTTTCTCAAGGTTTGAAGGTGATTGCTTGTG
TTGGTGAGACACTTGAGCAGCGTGAAGCAGGATCTACTATGGATGTTGTT
GCTGCACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGGTCAAACAT
TGTTTTGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCA
CTCCAGTGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTT
GCAAACACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGG
ATCCGTAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTG
ACGGATTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATC
ATCAAATCTGCTGAGCTGAAGTAAATTCTTGAGCTTTATTTCAGGGCAGT
TTGCTGATGAGTATTACTGT
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