CX295729

Overview
NameCX295729
Unique NameCX295729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHA3_CHICK (Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 56/160 (35.00%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  253 KELDFSNSV-----------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL-AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            KELD SN             E+  G  ++ S +   VA+KTL +  +T++ + + F+ E +++ +  HPN+++  G VT+S P+MIVTEY+  G L ++L++  A    +  V     IA GM YL +      +HRDL   NIL + +   KV+DFGLS
Sbjct:  614 KELDASNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KAGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLS 768          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 57/187 (30.48%), Postives = 92/187 (49.20%), Query Frame = 1
Query:  187 KPSTAPMHVQNAREV-PEYEIDPKELDFSNSVEITKGTFRIASWRG------------TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL----AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            +PS   M+V  A    P  E+  ++  +S   ++T    R+    G             QVAVK L +       + KA +D   LL ++ H N+V  +G   +   + ++ E++P GDLR +L  KG  KP +     ++ A + A G+ YLH      ++HRD++ +NIL D+    K+ADFGLS
Sbjct:  545 RPSRPTMNVPYANSPEPSIEMKKRKFTYSEVTKMTNNFGRVVGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVD---LLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGG-KPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLS 727          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL--KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            GTQVA+K    +    E  +  F  E+ +L K+RH ++V  +G   ++  M++V EY+  G  R +L  K    L     ++  +  ARG++YLH    + IIHRD++ +NIL D++   KVADFGLS
Sbjct:  547 GTQVAIKRGNPQ---SEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLS 671          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 46/129 (35.66%), Postives = 75/129 (58.14%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK---GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            G+ VAVK        DEDK++ FI+E+ LL +I H N+V+ LG   ++   ++V EY+P GDL   L  +     +   + ++ A++IA  ++Y+H      I HRD++ +NIL D+    K++DFG S
Sbjct:  450 GSIVAVK---RSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTS 575          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: LIMK1_XENLA (LIM domain kinase 1 OS=Xenopus laevis GN=limk1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 1
Query:  334 VKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKP-TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            V  + E +  DE+  + F+ E+ +++ + HP+V++F+G + +   +  +TEY+P G LR  +K      P    V FA DIA GM YLH      IIHRDL   N L  + G L VA+FGLS
Sbjct:  339 VMVMKELIRFDEETQRTFLKEVKVMRCLEHPHVLKFIGVLYKDKRLNFITEYIPGGTLRRVIKSMDTHCPWNQRVSFARDIAAGMTYLHSMN---IIHRDLNSHNCLVREDGGLVVANFGLS 457          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: FGFR1_DUGJA (Fibroblast growth factor receptor 1 OS=Dugesia japonica GN=FGFR1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 49/136 (36.03%), Postives = 79/136 (58.09%), Query Frame = 1
Query:  325 QVAVKTLGEEVFTDEDKVKAFIDELALLQKI-RHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-----------GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            +VAVK + ++ F+D + V  F+ E+ +++ I RHPNV+Q LG  TQ  P+ ++ E  P G+LR +++ K           G    ++   ++L IARGM YL      +++HRDL   NIL  +   +K+ADFGL+
Sbjct:  581 KVAVKMMRDD-FSDSN-VHDFVKEMEIMKHIGRHPNVIQLLGLCTQKGPLRVIVELAPYGNLRDFVRAKNKKYSKSKKIIGNFTSSILCTYSLQIARGMTYL---ASRSVVHRDLSARNILVGEHFEMKIADFGLT 711          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHA5_CHICK (Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+  G  ++   R   VA+KTL  +V   E + + F+ E +++ +  HPN++   G VT+S P+MIVTEY+  G L  +LK+  G       V     IA GM YL +      +HRDL   NIL + +   KV+DFGLS
Sbjct:  664 EVCSGRLKLQGKREFPVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLS 798          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 47/106 (44.34%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  385 FIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKP--TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            F  E+ LL ++ H NVV+ LG        M+V EY+P G LR  L  K  +K   T  +K AL   +G+ YLHE     IIHRD++ +NIL D+    KVADFGLS
Sbjct:  675 FKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLS 780          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 45/130 (34.62%), Postives = 76/130 (58.46%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL----KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            G  VAVK   +    DEDK++ FI+E+ +L +I H N+V+ LG   ++   ++V E++P G+L  +L     +       + ++ A+DIA  ++YLH +    I HRD++ +NI+ D+    KV+DFG S
Sbjct:  469 GRIVAVK---KSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTS 595          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL--KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            G QVAVK L EE        K F  E+ LL ++ H N+   +G   +   M+++ EY+   +L  YL  K+   L     +K +LD A+G+ YLH      I+HRD++P+NIL ++    K+ADFGLS
Sbjct:  595 GEQVAVKVLSEE---SAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLS 719          
The following BLAST results are available for this feature:
BLAST of CX295729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHA3_CHICK2.015e-1535.00Ephrin type-A receptor 3 OS=Gallus gallus GN=EPHA3... [more]
Y5596_ARATH2.632e-1530.48Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH2.632e-1536.72Probable receptor-like protein kinase At2g21480 OS... [more]
WAKLC_ARATH2.632e-1535.66Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
LIMK1_XENLA2.632e-1538.52LIM domain kinase 1 OS=Xenopus laevis GN=limk1 PE=... [more]
FGFR1_DUGJA2.632e-1536.03Fibroblast growth factor receptor 1 OS=Dugesia jap... [more]
EPHA5_CHICK2.632e-1537.14Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5... [more]
Y5977_ARATH3.437e-1544.34Probable leucine-rich repeat receptor-like protein... [more]
WAKLH_ARATH3.437e-1534.62Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
SIRK_ARATH3.437e-1537.50Senescence-induced receptor-like serine/threonine-... [more]

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Properties
Property NameValue
Genbank descriptionC05075C07SK DroRLeaf1 Citrus clementina cDNA clone C05075C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295729 ID=CX295729; Name=CX295729; organism=Citrus clementina; type=EST; length=718bp
CCGTGACATCGATAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAAG
GACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCTG
AAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCAC
CACGACGTGATCAAACTTTTGGAGGAACATGGTGCAAAGCCTTCAACAGC
TCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGATC
CTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTTT
CGGATTGCATCATGGCGTGGAACACAAGTTGCTGTGAAAACACTTGGAGA
GGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCATTGACGAGCTTG
CATTACTTCAGAAAATTCGTCATCCAAATGTTGTCCAGTTTTTGGGTGCT
GTAACCCAAAGCACTCCAATGATGATTGTCACAGAATATTTACCCAAGGG
AGATCTCCGTGCATATCTGAAGCAAAAGGGTGCATTAAAGCCCACACTAG
CTGTGAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAA
AACAGACCTGAAGCAATAATTCATCGGGATCTTGAGCCTTCAAATATACT
GCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGACTCAGCAGCT
ACTGAAATTTGCAATACA
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