CX295729

Overview
NameCX295729
Unique NameCX295729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 52/170 (30.59%), Postives = 91/170 (53.53%), Query Frame = 1
Query:  208 HVQNAREVPEYEIDPKELDFSNSVEITKG----TFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG---ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            +V+  R     E++    +FS S  + +G     ++     G  VAVK   +    DEDK++ FI+E+ +L +I H +VV+ LG   ++    +V E++P G+L  ++ ++         + ++ A+DIA  ++YLH      I HRD++ +NIL D+    KV+DFG S
Sbjct:  432 NVEKTRIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVK---KSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTS 598          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: RET_MOUSE (Proto-oncogene tyrosine-protein kinase receptor Ret OS=Mus musculus GN=Ret PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 56/189 (29.63%), Postives = 91/189 (48.15%), Query Frame = 1
Query:  226 EVPEYEIDPKELDFSNSV------EITKGT-FRIASWRG-TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLA------------------------VKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E P++E   K L    ++      ++ K T FR+    G T VAVK L E     + +++  + E  LL+++ HP+V++  GA +Q  P++++ EY   G LR +L+    + P                           + FA  I+RGM YL E +   ++HRDL   NIL  +   +K++DFGLS
Sbjct:  714 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SQSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRDSRKIGPAYVSGGGSRNSSSLDHPDERVLTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLS 897          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: LYN_MOUSE (Tyrosine-protein kinase Lyn OS=Mus musculus GN=Lyn PE=1 SV=4)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 61/190 (32.11%), Postives = 95/190 (50.00%), Query Frame = 1
Query:  139 YYKHHD-VIKLLEEHGAKPSTAPMHVQNAREVPEYEID-PKELDFSNSVEITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            Y K  D + + LE+    P       ++A E+P   I   K+L      E+  G +       T+VAVKTL     +    V+AF++E  L++ ++H  +V+    VT+  P+ I+TE++ KG L  +LK     K  L   + F+  IA GM Y+        IHRDL  +N+L  +S   K+ADFGL+
Sbjct:  211 YQKQSDGLCRRLEKACISPKPQKPWDKDAWEIPRESIKLVKKLGAGQFGEVWMGYYN----NSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLA 389          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: GDT2_DICDI (Probable serine/threonine-protein kinase gdt2 OS=Dictyostelium discoideum GN=gdt2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 1
Query:  244 IDPKELDFSNSVEITKGTFRIAS---WRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH-----LKVADFGLSSY*NLQY 717
            ID  E+   N   I++GTF I     WR + VAVK L  E + D D+++    E++LL+++RHPN++ ++G    S    IVT+Y  KG L  Y+ + K  +     ++  +DI++   YLH N    I HRDL+P NIL            KV+DFG S   N +Y
Sbjct: 1285 IDFNEIIIKNY--ISEGTFGIVYRGIWRSSPVAVKLLKNE-YVDHDEIEK---EISLLERLRHPNILLYVGRFIFSGIHGIVTDYCSKGCLSKYIHENKYKITIIQKIRILIDISKACAYLHRN---GITHRDLKPENILITSLNPKSLVCAKVSDFGTSKETNERY 1442          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPA4A_DANRE (Ephrin type-A receptor 4a (Fragment) OS=Danio rerio GN=epha4a PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 50/140 (35.71%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL-KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+  G  ++   R   VA+KTL +  +TD+ + + F+ E +++ +  HPN+++  G VT+  P+MI+TEY+  G L A+L K  G       V     IA GM YL +    + +HRDL   NIL + +   KV+DFG+S
Sbjct:    8 EVCSGRLKMPGKREICVAIKTL-KAGYTDKQR-RDFLSEASIMGQFDHPNIIRLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGILRGIASGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMS 142          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 45/130 (34.62%), Postives = 74/130 (56.92%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKG----ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            G  VAVK   +    DEDK++ FI+E+ +L +I H N+V+ LG   ++   ++V E++P G+L  +L             + ++ A+DIA  ++YLH      I HRD++ +NI+ D+    KV+DFG S
Sbjct:  455 GRIVAVK---KSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTS 581          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: SRK3_SPOLA (Tyrosine-protein kinase SRK3 (Fragment) OS=Spongilla lacustris GN=SRK3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 61/163 (37.42%), Postives = 81/163 (49.69%), Query Frame = 1
Query:  235 EYEID------PKELDFSNSVEITKGTFRIASWRGTQ-VAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL--AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+EID       ++L   N  E+  G      W GT  VAVKTL  +      +VK F+ E  +++KI HPN++Q     T   P+ IVTE +  G +  YLK       TL   V  +  IA GM YL  +   + IHRDL   NIL  +    KVADFGL+
Sbjct:   58 EWEIDRTTIQLQRKLGQGNFGEVWAGV-----WNGTTAVAVKTLKPDTM----EVKDFVQEAQVMKKIHHPNLLQLYAVCTIGEPIYIVTELMKYGSMLEYLKHGEGKNITLHQMVDMSAQIASGMTYLEAH---SYIHRDLAARNILVGEGNVCKVADFGLA 208          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  373 KVKAFIDELALLQKIRHPNVVQFLGAVTQSTP--MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            +V A   E+ LL+ ++H  +VQ+ G +       + I  EY+P G ++  LK  GAL  ++  K+   I  GM+YLH N    I+HRD++ +NILRD +G++K+ DFG S
Sbjct:  405 EVSALECEIQLLKNLQHERIVQYYGCLRDRAEKILTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGAS 511          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  373 KVKAFIDELALLQKIRHPNVVQFLGAVTQSTP--MMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            +V A   E+ LL+ ++H  +VQ+ G +       + I  EY+P G ++  LK  GAL  ++  K+   I  GM+YLH N    I+HRD++ +NILRD +G++K+ DFG S
Sbjct:  405 EVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGAS 511          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: M3K1_HUMAN (Mitogen-activated protein kinase kinase kinase 1 OS=Homo sapiens GN=MAP3K1 PE=1 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 43/131 (32.82%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTD---EDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSG-HLKVADFGLSS 699
            GT +AVK +     T    E+ V+A  +E+ ++  + HPN+++ LGA  + +   +  E++  G +   L + GA K ++ + +   + RG++YLHEN+   IIHRD++ +N+L D +G  L++ADFG ++
Sbjct: 1266 GTLMAVKQVTYVRNTSSEQEEVVEALREEIRMMSHLNHPNIIRMLGATCEKSNYNLFIEWMAGGSVAHLLSKYGAFKESVVINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAA 1393          
The following BLAST results are available for this feature:
BLAST of CX295729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLK_ARATH5.863e-1530.59Putative wall-associated receptor kinase-like 11 O... [more]
RET_MOUSE5.863e-1529.63Proto-oncogene tyrosine-protein kinase receptor Re... [more]
LYN_MOUSE5.863e-1532.11Tyrosine-protein kinase Lyn OS=Mus musculus GN=Lyn... [more]
GDT2_DICDI5.863e-1535.93Probable serine/threonine-protein kinase gdt2 OS=D... [more]
EPA4A_DANRE5.863e-1535.71Ephrin type-A receptor 4a (Fragment) OS=Danio reri... [more]
WAKLJ_ARATH7.658e-1534.62Wall-associated receptor kinase-like 10 OS=Arabido... [more]
SRK3_SPOLA7.658e-1537.42Tyrosine-protein kinase SRK3 (Fragment) OS=Spongil... [more]
M3K3_MOUSE7.658e-1538.18Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K3_HUMAN7.658e-1538.18Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K1_HUMAN7.658e-1532.82Mitogen-activated protein kinase kinase kinase 1 O... [more]

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Properties
Property NameValue
Genbank descriptionC05075C07SK DroRLeaf1 Citrus clementina cDNA clone C05075C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295729 ID=CX295729; Name=CX295729; organism=Citrus clementina; type=EST; length=718bp
CCGTGACATCGATAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAAG
GACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCTG
AAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCAC
CACGACGTGATCAAACTTTTGGAGGAACATGGTGCAAAGCCTTCAACAGC
TCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGATC
CTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTTT
CGGATTGCATCATGGCGTGGAACACAAGTTGCTGTGAAAACACTTGGAGA
GGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCATTGACGAGCTTG
CATTACTTCAGAAAATTCGTCATCCAAATGTTGTCCAGTTTTTGGGTGCT
GTAACCCAAAGCACTCCAATGATGATTGTCACAGAATATTTACCCAAGGG
AGATCTCCGTGCATATCTGAAGCAAAAGGGTGCATTAAAGCCCACACTAG
CTGTGAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAA
AACAGACCTGAAGCAATAATTCATCGGGATCTTGAGCCTTCAAATATACT
GCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGACTCAGCAGCT
ACTGAAATTTGCAATACA
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