CX295729

Overview
NameCX295729
Unique NameCX295729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: LIMK1_MOUSE (LIM domain kinase 1 OS=Mus musculus GN=Limk1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 1
Query:  334 VKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKP-TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            V  + E +  DE+  + F+ E+ +++ + HPNV++F+G + +   +  +TEY+  G LR  +K   +  P +  V FA DIA GM YLH      IIHRDL   N L  ++ ++ VADFGL+
Sbjct:  364 VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKNMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENRNVVVADFGLA 482          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: LIMK1_HUMAN (LIM domain kinase 1 OS=Homo sapiens GN=LIMK1 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 1
Query:  334 VKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKP-TLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            V  + E +  DE+  + F+ E+ +++ + HPNV++F+G + +   +  +TEY+  G LR  +K   +  P +  V FA DIA GM YLH      IIHRDL   N L  ++ ++ VADFGL+
Sbjct:  364 VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLA 482          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 41/127 (32.28%), Postives = 70/127 (55.12%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSS 699
            G +VA+K L      + +  +    E+ +L+   HP++++    +   T + +V EY+  G+L  Y+ +KG L+   A  F   I  G+ Y H N    ++HRDL+P N+L D   ++K+ADFGLS+
Sbjct:   65 GHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLVMEYVNSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRN---MVVHRDLKPENLLLDSKCNVKIADFGLSN 188          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: DLK1_CAEBR (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis briggsae GN=dlk-1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = 1
Query:  394 ELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+  L+ +RH N+++FLG  ++S    IV EY PKG L   L+QK  +   +   +  +IA GM+YLH+N+   +IHRDL+  NIL      +K+ DFG S
Sbjct:   98 EIKHLRHLRHKNIIEFLGVCSKSPCYCIVMEYCPKGQLCTVLRQKNLITRQMFSDWVKEIADGMHYLHQNK---VIHRDLKSPNILISAEDSIKICDFGTS 195          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL---KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+ KG  +     G+++AVK L +E       V+ F +E +L+ K++H N+V  LG   +    ++V E++P   L  +L    +KG L      K  +  ARG+ YLH + P  IIHRDL+ SNIL D     KVADFG++
Sbjct:  334 EVFKGVLQ----DGSEIAVKRLSKE---SAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMA 468          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 41/117 (35.04%), Postives = 71/117 (60.68%), Query Frame = 1
Query:  358 FTDEDKVKAFIDELA----LLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            F  ++K +A I EL     LL+ + HPN+V++LG V +   + I+ E++P G + + L++ G    ++   +   +  G+ YLH +   AI+HRD++ +NIL D+ G +K+ADFG S
Sbjct:  106 FASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDDTLNILLEFVPGGSISSLLEKFGPFPESVVRTYTRQLLLGLEYLHNH---AIMHRDIKGANILVDNKGCIKLADFGAS 219          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSS 699
            G  VAVK          +  + F  EL +L KIRH N+V  LG  ++    ++V EY+P G L  +L      L  ++ +K  L  ARG++YLH      IIHRD++ SNIL D     ++ADFGL S
Sbjct:  541 GIHVAVKRANAATIIHSNN-RGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHGDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGLVS 667          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 48/130 (36.92%), Postives = 78/130 (60.00%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI----ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            GT+VAVK    +    +  +  F  E+ +L + RH ++V  +G   ++  M++V EY+  G L+++L   G L  +L+ K  L+I    ARG++YLH    + +IHRD++ +NIL D++   KVADFGLS
Sbjct:  504 GTKVAVKRANPK---SQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLL--SLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLS 628          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 47/128 (36.72%), Postives = 74/128 (57.81%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI--ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            GT+VAVK    +    E  +  F  E+ +L K+RH ++V  +G   +++ M++V E++  G  R +L  K     T   +  + I  ARG++YLH    + IIHRD++ +NIL D++   KVADFGLS
Sbjct:  548 GTKVAVKRGNPQ---SEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLS 672          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 42/114 (36.84%), Postives = 70/114 (61.40%), Query Frame = 1
Query:  364 DEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK---GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            DEDKV+ FI+E+ +L +I H N+V+ LG   ++   ++V E++P GDL   L+ +     +   + +  A++IA  ++YLH      I HRD++ +NIL D+   +KV+DFG S
Sbjct:  458 DEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTS 571          
The following BLAST results are available for this feature:
BLAST of CX295729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LIMK1_MOUSE1.000e-1436.89LIM domain kinase 1 OS=Mus musculus GN=Limk1 PE=1 ... [more]
LIMK1_HUMAN1.000e-1436.89LIM domain kinase 1 OS=Homo sapiens GN=LIMK1 PE=1 ... [more]
KIN10_ARATH1.000e-1432.28SNF1-related protein kinase catalytic subunit alph... [more]
DLK1_CAEBR1.000e-1440.59Mitogen-activated protein kinase kinase kinase dlk... [more]
CRK33_ARATH1.000e-1436.62Putative cysteine-rich receptor-like protein kinas... [more]
ANP1_ARATH1.000e-1435.04Mitogen-activated protein kinase kinase kinase ANP... [more]
ACCR2_ARATH1.000e-1438.28Serine/threonine-protein kinase-like protein CCR2 ... [more]
Y5597_ARATH1.306e-1436.92Probable receptor-like protein kinase At5g59700 OS... [more]
Y4391_ARATH1.306e-1436.72Probable receptor-like protein kinase At4g39110 OS... [more]
WAKLD_ARATH1.306e-1436.84Wall-associated receptor kinase-like 4 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC05075C07SK DroRLeaf1 Citrus clementina cDNA clone C05075C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295729 ID=CX295729; Name=CX295729; organism=Citrus clementina; type=EST; length=718bp
CCGTGACATCGATAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAAG
GACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCTG
AAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCAC
CACGACGTGATCAAACTTTTGGAGGAACATGGTGCAAAGCCTTCAACAGC
TCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGATC
CTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTTT
CGGATTGCATCATGGCGTGGAACACAAGTTGCTGTGAAAACACTTGGAGA
GGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCATTGACGAGCTTG
CATTACTTCAGAAAATTCGTCATCCAAATGTTGTCCAGTTTTTGGGTGCT
GTAACCCAAAGCACTCCAATGATGATTGTCACAGAATATTTACCCAAGGG
AGATCTCCGTGCATATCTGAAGCAAAAGGGTGCATTAAAGCCCACACTAG
CTGTGAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAA
AACAGACCTGAAGCAATAATTCATCGGGATCTTGAGCCTTCAAATATACT
GCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGACTCAGCAGCT
ACTGAAATTTGCAATACA
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