CX295729

Overview
NameCX295729
Unique NameCX295729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 57/154 (37.01%), Postives = 89/154 (57.79%), Query Frame = 1
Query:  262 DFSNSVEITKGTFRIASWRG-----TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI----ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            +F  S+ I  G F +  +RG     T+VAVK            +  F+ E+ +L KIRH ++V  +G   + + M++V EY+ KG L+++L   G+  P L+ K  L++    ARG++YLH    + IIHRD++ +NIL D++   KVADFGLS
Sbjct:  488 NFDRSLVIGVGGFGMV-FRGSLKDNTKVAVKRGSPG---SRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLY--GSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLS 635          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: M3K7_RAT (Mitogen-activated protein kinase kinase kinase 7 OS=Rattus norvegicus GN=Map3k7 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  199 APMHVQNAREVPEYEIDPKELDFSNSVEITKGTFRI---ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALK---PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH-LKVADFG 690
            AP  V N  E+   EI+ +E+       + +G F +   A WR   VA+K +       E + KAFI EL  L ++ HPN+V+  GA     P+ +V EY   G L   L     L       A+ + L  ++G+ YLH  +P+A+IHRDL+P N+L    G  LK+ DFG
Sbjct:   21 APSQVLNFEEIDYKEIEVEEV-------VGRGAFGVVCKAKWRAKDVAIKQI-----ESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 177          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: M3K7_PONAB (Mitogen-activated protein kinase kinase kinase 7 OS=Pongo abelii GN=MAP3K7 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  199 APMHVQNAREVPEYEIDPKELDFSNSVEITKGTFRI---ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALK---PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH-LKVADFG 690
            AP  V N  E+   EI+ +E+       + +G F +   A WR   VA+K +       E + KAFI EL  L ++ HPN+V+  GA     P+ +V EY   G L   L     L       A+ + L  ++G+ YLH  +P+A+IHRDL+P N+L    G  LK+ DFG
Sbjct:   21 APSQVLNFEEIDYKEIEVEEV-------VGRGAFGVVCKAKWRAKDVAIKQI-----ESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 177          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: M3K7_MOUSE (Mitogen-activated protein kinase kinase kinase 7 OS=Mus musculus GN=Map3k7 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  199 APMHVQNAREVPEYEIDPKELDFSNSVEITKGTFRI---ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALK---PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH-LKVADFG 690
            AP  V N  E+   EI+ +E+       + +G F +   A WR   VA+K +       E + KAFI EL  L ++ HPN+V+  GA     P+ +V EY   G L   L     L       A+ + L  ++G+ YLH  +P+A+IHRDL+P N+L    G  LK+ DFG
Sbjct:   21 APSQVLNFEEIDYKEIEVEEV-------VGRGAFGVVCKAKWRAKDVAIKQI-----ESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 177          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: M3K7_HUMAN (Mitogen-activated protein kinase kinase kinase 7 OS=Homo sapiens GN=MAP3K7 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  199 APMHVQNAREVPEYEIDPKELDFSNSVEITKGTFRI---ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALK---PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH-LKVADFG 690
            AP  V N  E+   EI+ +E+       + +G F +   A WR   VA+K +       E + KAFI EL  L ++ HPN+V+  GA     P+ +V EY   G L   L     L       A+ + L  ++G+ YLH  +P+A+IHRDL+P N+L    G  LK+ DFG
Sbjct:   21 APSQVLNFEEIDYKEIEVEEV-------VGRGAFGVVCKAKWRAKDVAIKQI-----ESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 177          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: M3K7_BOVIN (Mitogen-activated protein kinase kinase kinase 7 OS=Bos taurus GN=MAP3K7 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 1
Query:  199 APMHVQNAREVPEYEIDPKELDFSNSVEITKGTFRI---ASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALK---PTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGH-LKVADFG 690
            AP  V N  E+   EI+ +E+       + +G F +   A WR   VA+K +       E + KAFI EL  L ++ HPN+V+  GA     P+ +V EY   G L   L     L       A+ + L  ++G+ YLH  +P+A+IHRDL+P N+L    G  LK+ DFG
Sbjct:   21 APSQVLNFEEIDYKEIEVEEV-------VGRGAFGVVCKAKWRAKDVAIKQI-----ESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 177          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: GDT4_DICDI (Probable serine/threonine-protein kinase gdt4 OS=Dictyostelium discoideum GN=gdt4 PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16
Identity = 64/189 (33.86%), Postives = 92/189 (48.68%), Query Frame = 1
Query:  217 NAREVPEYEIDPKELDFSNSVEI---------------------TKGTFRI---ASWRGTQVAVKTLGEEVFTDE-DKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNIL-----RDDSGHLKVADFG 690
            N +    YE D KEL FS  V +                     ++G+F +   A WR + VAVK        DE DK      E ++L KI+HPN+V F+G++       IV +Y P+G L  Y + Q   L     ++ +LDI+R  ++LH+N    IIHRDL+P N+L      D S   K++DFG
Sbjct: 1312 NEKVTIRYETDDKELAFSTFVYLNLESQVSSKIDFDEIVLEKYLSEGSFGVVYSAIWRSSSVAVKLFKHHYSKDEIDK------ETSILSKIKHPNIVSFIGSLNFLNTYGIVIDYHPRGSLNYYTRNQNIKLSMVQNIRISLDISRACSFLHKN---GIIHRDLKPDNVLIVSFDPDSSICAKISDFG 1491          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16
Identity = 59/156 (37.82%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  262 DFSNSVEITKGTFRIA---SWRGTQVAVKTLGEEVF-TDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGA-------LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            D     EI KG F      +W+G  VAVK L        E+ ++ F  E+ LL  ++HPN+V   G      PM IV E+LP G+L   +  K +       L  TL +  A DIARGM +LH      IIHRDL+ SN+L D   ++K+AD G++
Sbjct: 1072 DIKIDKEIGKGHFSKVLKGNWKGKDVAVKKLNSNKDKAREEMIQEFKAEVELLGSLQHPNLVTCYGY--SLNPMCIVMEFLPSGNLFELIHSKPSEQQQSIKLDSTLILAIAFDIARGMQHLHTRN---IIHRDLKSSNLLMDKHFNIKIADLGIA 1222          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHB1_RAT (Ephrin type-B receptor 1 OS=Rattus norvegicus GN=Ephb1 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            E+ KG  ++   R   VA+KTL  +    E + + F+ E +++ +  HPN+++  G VT+S P+MI+TE++  G L ++L+Q  G       V     IA GM YL E      +HRDL   NIL + +   KV+DFGLS Y
Sbjct:  632 EVYKGRLKLPGKREIYVAIKTL--KAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRY 768          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHB1_MOUSE (Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            E+ KG  ++   R   VA+KTL  +    E + + F+ E +++ +  HPN+++  G VT+S P+MI+TE++  G L ++L+Q  G       V     IA GM YL E      +HRDL   NIL + +   KV+DFGLS Y
Sbjct:  632 EVYKGRLKLPGKREIYVAIKTL--KAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRY 768          
The following BLAST results are available for this feature:
BLAST of CX295729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5241_ARATH2.380e-1637.01Probable receptor-like protein kinase At5g24010 OS... [more]
M3K7_RAT2.380e-1635.09Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7_PONAB2.380e-1635.09Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7_MOUSE2.380e-1635.09Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7_HUMAN2.380e-1635.09Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7_BOVIN2.380e-1635.09Mitogen-activated protein kinase kinase kinase 7 O... [more]
GDT4_DICDI2.380e-1633.86Probable serine/threonine-protein kinase gdt4 OS=D... [more]
Y9963_DICDI3.109e-1637.82Probable serine/threonine-protein kinase DDB_G0272... [more]
EPHB1_RAT3.109e-1636.62Ephrin type-B receptor 1 OS=Rattus norvegicus GN=E... [more]
EPHB1_MOUSE3.109e-1636.62Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 ... [more]

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Properties
Property NameValue
Genbank descriptionC05075C07SK DroRLeaf1 Citrus clementina cDNA clone C05075C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295729 ID=CX295729; Name=CX295729; organism=Citrus clementina; type=EST; length=718bp
CCGTGACATCGATAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAAG
GACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCTG
AAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCAC
CACGACGTGATCAAACTTTTGGAGGAACATGGTGCAAAGCCTTCAACAGC
TCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGATC
CTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTTT
CGGATTGCATCATGGCGTGGAACACAAGTTGCTGTGAAAACACTTGGAGA
GGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCATTGACGAGCTTG
CATTACTTCAGAAAATTCGTCATCCAAATGTTGTCCAGTTTTTGGGTGCT
GTAACCCAAAGCACTCCAATGATGATTGTCACAGAATATTTACCCAAGGG
AGATCTCCGTGCATATCTGAAGCAAAAGGGTGCATTAAAGCCCACACTAG
CTGTGAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAA
AACAGACCTGAAGCAATAATTCATCGGGATCTTGAGCCTTCAAATATACT
GCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGACTCAGCAGCT
ACTGAAATTTGCAATACA
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