CX295729

Overview
NameCX295729
Unique NameCX295729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: CSK_CHICK (Tyrosine-protein kinase CSK OS=Gallus gallus GN=CSK PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16
Identity = 50/138 (36.23%), Postives = 77/138 (55.80%), Query Frame = 1
Query:  292 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGA-VTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            G   +  +RG +VAVK +  +        +AF+ E +++ ++RH N+VQ LG  V + + + IVTEY+ KG L  YL+ +G   L     +KF+LD+   M YL  N     +HRDL   N+L  +    KV+DFGL+
Sbjct:  207 GDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKSGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNIAKVSDFGLT 336          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y9847_DICDI (Probable serine/threonine-protein kinase DDB_G0267686 OS=Dictyostelium discoideum GN=DDB_G0267686 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 1
Query:  238 YEIDPKELDFSNSV-EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            + ID +E+ F N + E T      A+WR  +VAVK L  E   +  K+  F+ EL ++  +R P+VV F G V      MI+ EY     L   +  +         KFA+++ RG+N LH  +P  I+HRDL+  N+L  D+  +KVADFGLS +
Sbjct: 1942 WAIDGEEIVFLNKLGEGTSAKVYRATWRNQEVAVKVLRSE--PESQKLLDFLKELEIMSSLRSPHVVYFYGMVLDPKICMIM-EYCSNQTLYHLMHLQMNFTWDWVFKFAIEMVRGVNCLHSWKP-VIVHRDLKSLNLLVSDNWTIKVADFGLSRF 2093          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16
Identity = 53/130 (40.77%), Postives = 79/130 (60.77%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDI----ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            GT+VAVK         E  +  F  E+ +L K+RH ++V  +G   + + M++V EY+  G LR++L   GA  P L+ K  L+I    ARG++YLH    ++IIHRD++ +NIL D++   KVADFGLS
Sbjct:  532 GTKVAVKRGNPR---SEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLY--GADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLS 656          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHB1_HUMAN (Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            E+ KG  ++   R   VA+KTL  +    E + + F+ E +++ +  HPN+++  G VT+S P+MI+TE++  G L ++L+Q  G       V     IA GM YL E      +HRDL   NIL + +   KV+DFGLS Y
Sbjct:  632 EVYKGRLKLPGKREIYVAIKTL--KAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRY 768          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHB1_CHICK (Ephrin type-B receptor 1 (Fragment) OS=Gallus gallus GN=EPHB1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            E+ KG  ++   R   VA+KTL  +    E + + F+ E +++ +  HPN+++  G VT+S P+MI+TE++  G L ++L+Q  G       V     IA GM YL E      +HRDL   NIL + +   KV+DFGLS Y
Sbjct:  632 EVYKGRLKLPGKREIYVAIKTL--KAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRY 768          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: CSK_BOVIN (Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16
Identity = 50/138 (36.23%), Postives = 77/138 (55.80%), Query Frame = 1
Query:  292 GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGA-VTQSTPMMIVTEYLPKGDLRAYLKQKG--ALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            G   +  +RG +VAVK +  +        +AF+ E +++ ++RH N+VQ LG  V + + + IVTEY+ KG L  YL+ +G   L     +KF+LD+   M YL  N     +HRDL   N+L  +    KV+DFGL+
Sbjct:  207 GDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKSGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLT 336          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y9956_DICDI (Probable serine/threonine-protein kinase DDB_G0268876 OS=Dictyostelium discoideum GN=DDB_G0268876 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 1
Query:  229 VPEYEIDPKELDFSNSVEITK-------GTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGA-LKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            V + EI   +    + +E+TK       G  +   W+G ++AVK   EE     ++   F  E  ++  +RH N+V  +G   Q   M +V +Y  +G L + +      L     V  AL +A+GMNYLH      IIHRDL+P N+L D   +++++DFGLS
Sbjct:  742 VRQGEISVLKYISQSDLELTKEIGRGVSGVVKRGKWKGYEIAVKQFNEEELGFSER--EFHSEATIMSVLRHDNIVHCVGGSAQPGKMYLVCDYYSRGSLYSVITANICPLSNARIVHLALQVAKGMNYLHSL---GIIHRDLKPGNLLIDQDWNIRISDFGLS 900          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 1
Query:  238 YEIDPKELDFSNSVEITKGTFRIASWRG------TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALK-PTLAVKFALDI----ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            +EI     DF + + I  G F  + ++G      T VAVK L     T     K F  EL +L K+RH ++V  +G   +   M++V EY+P G L+ +L ++     P L+ K  L+I    ARG+ YLH      IIHRD++ +NIL D++   KV+DFGLS
Sbjct:  509 FEIKSATNDFEDKLIIGVGGFG-SVYKGQIDGGATLVAVKRLE---ITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLS 668          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 58/176 (32.95%), Postives = 88/176 (50.00%), Query Frame = 1
Query:  187 KPSTAPMHVQNAREVPEYEIDPKELDFSNSVEITKG----TFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL--KQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            + S A + ++  +     E+     +F++S +I +G     ++     GT VA+K   E     E   K F+ E+ LL ++ H N+V  LG   +    M+V EY+  G LR  +  K K  L   + ++ AL  A+G+ YLH      I HRD++ SNIL D     KVADFGLS
Sbjct:  599 RSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGE---KEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLS 771          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = 1
Query:  313 WRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAV----TQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            W+G +VAVK   E  F+   +++ F+ E+A+L  I HPN+++  GA     +  +  MIVTE + KG L   + +   L     +K+AL +A+G+ YLH       IHRD++ +NIL D + + KV DFGLS
Sbjct: 1396 WKGKEVAVKIFNEGSFSF--RLEDFLKEVAILGLISHPNLLKLKGACIAPRSHKSTFMIVTELMHKGTLLEVINKNKPLSLEDIIKYALSVAQGLAYLHS---VDFIHRDIKAANILVDKNNNAKVGDFGLS 1522          
The following BLAST results are available for this feature:
BLAST of CX295729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK_CHICK3.109e-1636.23Tyrosine-protein kinase CSK OS=Gallus gallus GN=CS... [more]
Y9847_DICDI4.060e-1636.54Probable serine/threonine-protein kinase DDB_G0267... [more]
THE1_ARATH4.060e-1640.77Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
EPHB1_HUMAN4.060e-1636.62Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 ... [more]
EPHB1_CHICK4.060e-1636.62Ephrin type-B receptor 1 (Fragment) OS=Gallus gall... [more]
CSK_BOVIN4.060e-1636.23Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK P... [more]
Y9956_DICDI5.303e-1632.32Probable serine/threonine-protein kinase DDB_G0268... [more]
Y5900_ARATH5.303e-1636.59Putative receptor-like protein kinase At5g39000 OS... [more]
Y1684_ARATH5.303e-1632.95Probable LRR receptor-like serine/threonine-protei... [more]
Y1199_DICDI5.303e-1637.88Probable serine/threonine-protein kinase DDB_G0282... [more]

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Properties
Property NameValue
Genbank descriptionC05075C07SK DroRLeaf1 Citrus clementina cDNA clone C05075C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295729 ID=CX295729; Name=CX295729; organism=Citrus clementina; type=EST; length=718bp
CCGTGACATCGATAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAAG
GACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCTG
AAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCAC
CACGACGTGATCAAACTTTTGGAGGAACATGGTGCAAAGCCTTCAACAGC
TCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGATC
CTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTTT
CGGATTGCATCATGGCGTGGAACACAAGTTGCTGTGAAAACACTTGGAGA
GGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCATTGACGAGCTTG
CATTACTTCAGAAAATTCGTCATCCAAATGTTGTCCAGTTTTTGGGTGCT
GTAACCCAAAGCACTCCAATGATGATTGTCACAGAATATTTACCCAAGGG
AGATCTCCGTGCATATCTGAAGCAAAAGGGTGCATTAAAGCCCACACTAG
CTGTGAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAA
AACAGACCTGAAGCAATAATTCATCGGGATCTTGAGCCTTCAAATATACT
GCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGACTCAGCAGCT
ACTGAAATTTGCAATACA
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