CX295729

Overview
NameCX295729
Unique NameCX295729
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHB2_HUMAN (Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 PE=1 SV=5)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            E+  G  ++   R   VA+KTL +  +T++ + + F+ E +++ +  HPNV+   G VT+STP+MI+TE++  G L ++L+Q  G       V     IA GM YL +      +HRDL   NIL + +   KV+DFGLS +
Sbjct:  634 EVCSGHLKLPGKREIFVAIKTL-KSGYTEKQR-RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRF 770          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: BYR2_SCHPO (Protein kinase byr2 OS=Schizosaccharomyces pombe GN=byr2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 43/124 (34.68%), Postives = 70/124 (56.45%), Query Frame = 1
Query:  325 QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            QV + ++ E        + A   E+ALLQ++ H ++VQ+LG+   S  + I  EY+P G +   L   G+ + TL   F     +G+ YLH      I+HRD++ +NIL D+ G +K++DFG+S
Sbjct:  424 QVILDSVSESKDRHAKLLDALAGEIALLQELSHEHIVQYLGSNLNSDHLNIFLEYVPGGSVAGLLTMYGSFEETLVKNFIKQTLKGLEYLHS---RGIVHRDIKGANILVDNKGKIKISDFGIS 544          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15
Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYL----KQKGALKPTLAVKFALDI----ARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            GTQVA+K   +   + E  +  F  E+ +L K+RH ++V  +G   ++  M++V EY+  G LR +L    +      PTL+ K  L+I    ARG++YLH    + IIHRD++ +NIL D++   KV+DFGLS
Sbjct:  547 GTQVAIKRGSQ---SSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLS 677          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: Y4251_DICDI (Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum GN=DDB_G0284251 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15
Identity = 44/127 (34.65%), Postives = 73/127 (57.48%), Query Frame = 1
Query:  319 GTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSS 699
            G  VA+K +      DE  +++   E+ +L K+RH N+V+ LG V     +  + EY+  G LR  +++ G L   L + +   + +G+ YLH N+   +IHRD++ SNIL    G +K+ADFG++S
Sbjct:   59 GEFVAIKQIDSNKI-DESSLQSVKGEVEILHKLRHNNIVKVLGVVEVQAQLNFILEYVENGSLRDVIEKFGPLSEELCIIYLYQMLQGLAYLHSNK---VIHRDIKASNILITKEGVIKLADFGVAS 181          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: SRK2_SPOLA (Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15
Identity = 52/126 (41.27%), Postives = 70/126 (55.56%), Query Frame = 1
Query:  322 TQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            T VAVKTL         +  AF+ E  +++K+RHP ++Q     TQ  P+ I+TE + KG L  YL+ + GALK    +  A  +A GM YL  +     IHRDL   NIL  D+   KVADFGL+
Sbjct:  118 TPVAVKTLKAGTM----QPAAFLAEAQIMKKLRHPKLIQLYAVCTQGEPVYIITELMSKGSLLDYLQGEAGALKLPQLIDMAAQVAAGMAYLELHN---YIHRDLAARNILVGDNNICKVADFGLA 236          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHA3_RAT (Ephrin type-A receptor 3 OS=Rattus norvegicus GN=Epha3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  253 KELDFSNSV-----------EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL-AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            KELD +N             E+  G  ++ S +   VA+KTL  +V   E + + F+ E +++ +  HPN+++  G VT+S P+MIVTEY+  G L ++L++  A    +  V     IA GM YL +      +HRDL   NIL + +   KV+DFGLS
Sbjct:  615 KELDATNIAIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLS 769          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: ITK_MOUSE (Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN=Itk PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 1
Query:  235 EYEIDPKELDFSNSVEITKGTF---RIASWRGT-QVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLK-QKGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLSSY 702
            ++ I P EL F    EI  G F    +  W    +VA+KT+ E   ++ED    FI+E  ++ K+ HP +VQ  G   +  P+ +V E++  G L  YL+ Q+G       +   LD+  GM YL +     +IHRDL   N L  ++  +KV+DFG++ +
Sbjct:  360 KWVIQPSELTFVQ--EIGSGQFGLVHLGYWLNKDKVAIKTIQEGAMSEED----FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEK---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 511          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHA5_MOUSE (Ephrin type-A receptor 5 OS=Mus musculus GN=Epha5 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQK-GALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+  G  ++   R   VA+KTL  +V   E + + F+ E +++ +  HPN++   G VT+S P+MIVTEY+  G L  +LK+  G       V     IA GM YL +      +HRDL   NIL + +   KV+DFGLS
Sbjct:  527 EVCSGCLKLPGKRELPVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIAAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLS 661          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHA3_HUMAN (Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 51/140 (36.43%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQKGALKPTL-AVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+  G  ++ S +   VA+KTL  +V   E + + F+ E +++ +  HPN+++  G VT+S P+MIVTEY+  G L ++L++  A    +  V     IA GM YL +      +HRDL   NIL + +   KV+DFGLS
Sbjct:  634 EVCSGRLKLPSKKEISVAIKTL--KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLS 768          
BLAST of CX295729 vs. ExPASy Swiss-Prot
Match: EPHA3_DANRE (Ephrin type-A receptor 3 OS=Danio rerio GN=epha3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 52/140 (37.14%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  280 EITKGTFRIASWRGTQVAVKTLGEEVFTDEDKVKAFIDELALLQKIRHPNVVQFLGAVTQSTPMMIVTEYLPKGDLRAYLKQ-KGALKPTLAVKFALDIARGMNYLHENRPEAIIHRDLEPSNILRDDSGHLKVADFGLS 696
            E+  G  R+ S R  QVA+K+L  +    E + + F+ E +++ +  HPN+++  G VT+  P+MIVTEY+  G L  +LK+  G       +     IA GM YL E      +HRDL   NIL + +   KV+DFGLS
Sbjct:  639 EVCSGRLRLPSKREIQVAIKSL--KAGYSEHQRRDFLSEASIMGQFDHPNIIRLEGVVTRCKPVMIVTEYMENGSLDTFLKKHDGQFTVIQLLGMLRGIAAGMQYLSEMN---YVHRDLAARNILVNRNLVCKVSDFGLS 773          
The following BLAST results are available for this feature:
BLAST of CX295729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHB2_HUMAN1.181e-1535.92Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 ... [more]
BYR2_SCHPO1.181e-1534.68Protein kinase byr2 OS=Schizosaccharomyces pombe G... [more]
Y5613_ARATH1.543e-1538.06Probable receptor-like protein kinase At5g61350 OS... [more]
Y4251_DICDI1.543e-1534.65Probable serine/threonine-protein kinase DDB_G0284... [more]
SRK2_SPOLA1.543e-1541.27Tyrosine-protein kinase SRK2 (Fragment) OS=Spongil... [more]
EPHA3_RAT1.543e-1535.00Ephrin type-A receptor 3 OS=Rattus norvegicus GN=E... [more]
ITK_MOUSE2.015e-1532.92Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN... [more]
EPHA5_MOUSE2.015e-1537.14Ephrin type-A receptor 5 OS=Mus musculus GN=Epha5 ... [more]
EPHA3_HUMAN2.015e-1536.43Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 ... [more]
EPHA3_DANRE2.015e-1537.14Ephrin type-A receptor 3 OS=Danio rerio GN=epha3 P... [more]

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Properties
Property NameValue
Genbank descriptionC05075C07SK DroRLeaf1 Citrus clementina cDNA clone C05075C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295729 ID=CX295729; Name=CX295729; organism=Citrus clementina; type=EST; length=718bp
CCGTGACATCGATAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAAG
GACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCTG
AAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCAC
CACGACGTGATCAAACTTTTGGAGGAACATGGTGCAAAGCCTTCAACAGC
TCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGATC
CTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTTT
CGGATTGCATCATGGCGTGGAACACAAGTTGCTGTGAAAACACTTGGAGA
GGAAGTTTTCACTGATGAGGATAAAGTGAAGGCATTCATTGACGAGCTTG
CATTACTTCAGAAAATTCGTCATCCAAATGTTGTCCAGTTTTTGGGTGCT
GTAACCCAAAGCACTCCAATGATGATTGTCACAGAATATTTACCCAAGGG
AGATCTCCGTGCATATCTGAAGCAAAAGGGTGCATTAAAGCCCACACTAG
CTGTGAAGTTCGCTCTTGACATTGCTAGGGGAATGAATTATTTGCATGAA
AACAGACCTGAAGCAATAATTCATCGGGATCTTGAGCCTTCAAATATACT
GCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGACTCAGCAGCT
ACTGAAATTTGCAATACA
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