CX295736

Overview
NameCX295736
Unique NameCX295736
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8146 contig Ccv1_Contig8146:579..1289. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295736 vs. ExPASy Swiss-Prot
Match: S35E1_DROME (Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 71/207 (34.30%), Postives = 124/207 (59.90%), Query Frame = 1
Query:   19 FLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAGASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGN 633
            + +L++P+A+   L  VTS++S   V VS+ HT+KA  P F    ++   G++ P  ++LSL P++ GV +A++TE+SF+  G ISA+IS + F+ ++I+SKK +  T++    +   +  ++LF+ +P  + ++   + +H    AI  +   + I+ LF  G+   L N +A + L  V PLT+AV +  KR+FVI  S+L  GN
Sbjct:   77 YYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALISTMGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMDSFAVFRH---TAIKNLD-YRVIALLFADGVLNWLQNIIAFSVLSLVTPLTYAVASASKRIFVIAVSLLILGN 279          
BLAST of CX295736 vs. ExPASy Swiss-Prot
Match: S35E2_HUMAN (Solute carrier family 35 member E2 OS=Homo sapiens GN=SLC35E2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19
Identity = 60/211 (28.44%), Postives = 113/211 (53.55%), Query Frame = 1
Query:   19 FLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAGASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALFVCIPPAI-IVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNR 636
            FL  ++ V +      V   VS   VAVSF  T+K+  P F    S+ ILG+   L + LSL PV+ G+++ + TE+SFN  GF +A+ +NI    ++++SKK ++       +  +  Y S  A+ + +P  +   + P + + G S + ++  ++  ++D    G+ +HL +  A   + +++P+T +V + +K    I  S++ FGN+
Sbjct:  142 FLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNVLGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDVVLLLLTD----GVLFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNK 348          
BLAST of CX295736 vs. ExPASy Swiss-Prot
Match: S35E1_RAT (Solute carrier family 35 member E1 OS=Rattus norvegicus GN=Slc35e1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 60/206 (29.13%), Postives = 113/206 (54.85%), Query Frame = 1
Query:   25 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAGASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGN 633
            + ++P+A       V+++VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+   L    +S  ++ V    +   L  V  F +   N +A + L  ++PL+++V N  KR+ VI  S++   N
Sbjct:  110 RYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD---LSTFLVSSDLAYVSQWPWTLLLLVVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVIAVSLIMLRN 312          
BLAST of CX295736 vs. ExPASy Swiss-Prot
Match: S35E2_MOUSE (Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 62/211 (29.38%), Postives = 112/211 (53.08%), Query Frame = 1
Query:   19 FLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAGASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALFVCIPP-AIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNR 636
            F+  ++ V +      V   VS   VAVSF  T+K+  P F    S+ ILG+   L + LSL PV+ G+++ + TE+SFN  GF +A+ +NI    ++++SKK ++       +  +  Y S  A+ + IP     ++ P + + G S + S+  ++  ++D    G  +HL +  A   + +++P+T +V + +K    I  SI+ FGN+
Sbjct:  142 FIMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATEISFNILGFSAALSTNIMDCLQNVFSKKLLSGDKYRFSAPELQFYTSAAAVALLIPAWTFFMDIPVIGRSGKSFSYSQDIVLLLLTD----GALFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSIIVFGNK 348          
BLAST of CX295736 vs. ExPASy Swiss-Prot
Match: S35E1_MOUSE (Solute carrier family 35 member E1 OS=Mus musculus GN=Slc35e1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 60/206 (29.13%), Postives = 113/206 (54.85%), Query Frame = 1
Query:   25 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAGASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGN 633
            + ++P+A       V+++VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+   L    +S  ++ V    +   L  V  F +   N +A + L  ++PL+++V N  KR+ VI  S++   N
Sbjct:  110 RYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD---LSTFLVSSDLAYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRN 312          
BLAST of CX295736 vs. ExPASy Swiss-Prot
Match: S35E1_HUMAN (Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18
Identity = 61/206 (29.61%), Postives = 113/206 (54.85%), Query Frame = 1
Query:   25 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAGASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL-YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGN 633
            + ++P+A       V+++VS   V VS+ HT+KA  P +    S+ I+ ++    ++LSL P++ GV +A++TELSF+  G +SA+ + + F+ ++I+SKK + D  +    +   +   A+F  IP  ++V+   L    +S  ++ V    +   L  V  F +   N +A + L  V+PL+++V N  KR+ VI  S++   N
Sbjct:  110 RYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVD---LSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLIMLRN 312          
BLAST of CX295736 vs. ExPASy Swiss-Prot
Match: YG1B_SCHPO (Putative transporter C83.11 OS=Schizosaccharomyces pombe GN=SPBC83.11 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 59/209 (28.23%), Postives = 102/209 (48.80%), Query Frame = 1
Query:   34 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAGASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDS-----------TNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAF 627
            +P+++    GHV  +++   + VS  HT+KAL P F   A +F+         + SL P+  GV++A   ELS +  G + A+IS   F  ++I+  K   +  S            N+  Y S +A  V IP  +  EG           + +VG   F+ +L + G+ +   N LA   L  ++P+ +++ +++KR+FVI  SI+ F
Sbjct:   74 LPLSIFQIGGHVFGSLATTKIPVSTVHTVKALSPLFTVLAYRFMFRHVYSAMTYFSLVPLTFGVTLACSFELSADIVGLLYALISTCIFVSQNIFGSKIFMEAKSHSTHTKKHYNKLNLLLYSSGVAFIVMIPVWLYQEG--------FAYLPEVGSPVFL-NLIYNGLSHFFQNILAFTLLSIISPVAYSIASLIKRIFVIVVSIIWF 273          
The following BLAST results are available for this feature:
BLAST of CX295736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
S35E1_DROME1.558e-2834.30Solute carrier family 35 member E1 homolog OS=Dros... [more]
S35E2_HUMAN8.567e-1928.44Solute carrier family 35 member E2 OS=Homo sapiens... [more]
S35E1_RAT1.119e-1829.13Solute carrier family 35 member E1 OS=Rattus norve... [more]
S35E2_MOUSE1.461e-1829.38Solute carrier family 35 member E2 OS=Mus musculus... [more]
S35E1_MOUSE1.909e-1829.13Solute carrier family 35 member E1 OS=Mus musculus... [more]
S35E1_HUMAN2.493e-1829.61Solute carrier family 35 member E1 OS=Homo sapiens... [more]
YG1B_SCHPO8.019e-1728.23Putative transporter C83.11 OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionC05075D02SK DroRLeaf1 Citrus clementina cDNA clone C05075D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295736 ID=CX295736; Name=CX295736; organism=Citrus clementina; type=EST; length=706bp
GCTCCTATTGATTCAAAATTCCTGAAGCTGTTAATCCCTGTTGCTGTGTG
TCATGCATTGGGCCATGTTACCAGCAACGTGTCTTTTGCAGCAGTTGCTG
TCTCCTTTACTCATACCATCAAAGCTCTTGAGCCCTTCTTCAACGCTGGT
GCTTCACAATTCATTCTAGGCCAACAGTTACCTCTGACTCTGTGGCTGTC
TCTTGCTCCTGTGGTTATTGGAGTGTCAATGGCATCATTGACTGAGCTGT
CGTTCAATTGGACGGGCTTCATTAGTGCTATGATTTCCAACATATCGTTT
ACTTACAGGAGTATCTACTCCAAGAAAGCCATGACTGATATGGACAGTAC
TAATATTTATGCCTATATTTCCATCATTGCGCTCTTTGTCTGTATTCCAC
CAGCCATCATTGTTGAGGGACCTCAACTGATTAAGCATGGCTTAAGTGAT
GCAATTTCCAAAGTGGGCATGGTCAAGTTCATTTCAGATCTTTTTTGGGT
GGGGATGTTTTACCACCTCTACAATCAGTTGGCTACGAACACCTTGGAGA
GGGTTGCACCTCTTACTCATGCAGTTGGCAATGTGCTGAAACGTGTGTTT
GTGATTGGGTTCTCAATCCTGGCCTTTGGCAACAGATCTCACCCAAACTG
GTATTGGACAGTCATTGCATTGCTGGAGTGCAGCCTACTCTTACATCAGC
CCAATG
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