CX295738
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.583e-15 Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 16 DGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 D I+RS P +P + + F N + K LI+ + E+ ++SQ + + KV+ LGI + D +++ PNS ++ FLG GAI++ AN +T +E+ KQ+K S KL+IT DKVK ++ F L+E S ++P+V + D AL YSSG Sbjct: 10 DLIFRSKLPDIYIPKH--LPLHTYCFENISKVGDKSCLINGATGETFTYSQVELLSRKVASGLNKLGIQQGDTIMLLLPNSPEYFFAFLGASYRGAISTMANPFFTSAEVIKQLKASQAKLIITQACYVDKVKD-------YAAEKNIQIICIDDAPQDCLHFSKLMEADES--EMPEVVINSDDVVALPYSSG 192
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CLL8_ORYSJ (Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp. japonica GN=4CLL8 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.292e-15 Identity = 55/197 (27.92%), Postives = 93/197 (47.21%), Query Frame = 1 Query: 19 GIYRSLRPPFVLP----SDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 G+YRS PP S P + + H L + + A +DA + +LSF+ +++ ++V+ + G+ + V L+ +PNS+ FP L V+++GA+ S AN + T EL++Q D+ P L + EL K++ + P V L + D+P ++ + DAA L YSSG Sbjct: 16 GVYRSGHPPQFAAAAALSFPEYILPHMLLPGRRA---RPAFVDASTGAALSFAGLRALSLRVARALAAAGLRRGRVALLLSPNSLHFPALSLAVLSLGAVLSAANPLLTPDELARQADDAKPFLALVTGELAPKLRSI-APDVKLVLVEQLLADVAAEVD------------DDETLDLPAANIGRDDAALLFYSSG 196
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL5_ORYSJ (Probable 4-coumarate--CoA ligase 5 OS=Oryza sativa subsp. japonica GN=4CL5 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.244e-14 Identity = 56/194 (28.87%), Postives = 90/194 (46.39%), Query Frame = 1 Query: 22 IYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGL-NLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVK-QTDAAALLYSSG 597 ++RS P +P + ++F A + LID + E+LSF ++ +V+ +G+ V++ PNS++F + FL +GA+ +TAN ++T E++KQV S +V+T P KV GL + V G F L GS +P+V++ DA AL YSSG Sbjct: 9 VFRSRLPDIAIPDH--LPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALSRRVAAGLSSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANPLHTPPEIAKQVAASGATVVVTEPAFVAKVSGLAGVTVVATGG-----------GAERCASFAGLAAADGSA--LPEVAIDVANDAVALPYSSG 187
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.624e-14 Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 16 DGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 D I+RS P +P + + F N + K LI+ + E+ ++SQ + + KV+ LGI + D +++ PNS ++ FLG GAI++ AN +T +E+ KQ+K S KL+IT DKVK ++ F L+E S ++P+V + D AL YSSG Sbjct: 10 DLIFRSKLPDIYIPKH--LPLHTYCFENISKVGDKSCLINGATGETFTYSQVELLSRKVASGLNKLGIQQGDTIMLLLPNSPEYFFAFLGASYRGAISTMANPFFTSAEVIKQLKASLAKLIITQACYVDKVKD-------YAAEKNIQIICIDDAPQDCLHFSKLMEADES--EMPEVVIDSDDVVALPYSSG 192
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14 Identity = 53/192 (27.60%), Postives = 86/192 (44.79%), Query Frame = 1 Query: 22 IYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 +YRS P + + + F A ++ + LID +D + FS+ + I KV+ LG+ + VV++ PN I+F F+G GAI +TAN Y E++KQ K + ++++T+ +K+ L VL+ + D H + T P V + D AL YSSG Sbjct: 11 LYRSKLPDIEISDH--LPLHSYCFERVAEFADRPCLIDGATDRTYCFSEVELISRKVAAGLAKLGLQQGQVVMLLLPNCIEFAFVFMGASVRGAIVTTANPFYKPGEIAKQAKAAGARIIVTLAAYVEKLADLQSHDVLVITIDDAPKEGCQ---------HISVLTEADETQCPAVKIHPDDVVALPYSSG 191
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14 Identity = 50/196 (25.51%), Postives = 99/196 (50.51%), Query Frame = 1 Query: 13 RDGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSD-ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 ++ ++RS PP +P ++ F+ + +Y+ ++AL++A + S ++ + + + + R +G+ K VV++ PN +P+ LG+++ GA+ S N +E+ KQV+DS KLV+ +DKVK +P + +G ++ + +G+ +P + +Q+D AL YSSG Sbjct: 16 QEHVFRSRFPPVAVPD--GVTVPEFVLDGAEAYADRVALVEAAAGGRSYTYGEVARDTARFARALRSVGVRKGHVVVVALPNLAVYPVVSLGIMSAGAVFSGVNPRALAAEIKKQVEDSEAKLVVANEVAFDKVKDAGVPVIGVGDRERMPGAISWDGLLA------AADRTGAGV-VPVDAAQQSDLCALPYSSG 202
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.726e-14 Identity = 54/198 (27.27%), Postives = 95/198 (47.98%), Query Frame = 1 Query: 16 DGIYRSLRPPFVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGL----NLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 D I+RS P +P+ + + F N + +SS+ LI+ + + +++ + KV+ GI KD ++I PNS +F F+G +GAI++ AN ++T +E+ KQ K S+ K+++T +KVK ++ + + S H + + DIP+V ++ D AL YSSG Sbjct: 9 DIIFRSKLPDIYIPNH--LPLHSYCFENISEFSSRPCLINGANKQIYTYADVELNSRKVAAGLHKQGIQPKDTIMILLPNSPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIIVTQACHVNKVKDYAFENDVKIICIDS-------------APEGCLHFSVLTQANEHDIPEVEIQPDDVVALPYSSG 191
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 65/205 (31.71%), Postives = 96/205 (46.83%), Query Frame = 1 Query: 25 YRSLRPPFVL-PSDPSFSMVHFLF----RNSASYSSKL-----ALIDADSDESLSFSQFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSV---TDIPDVSVKQTDAAALLYSSG 597 +RSLRPP L P D S F F R+S+S SS L AL+DA + E++SF F S V ++ + R +G+ DV + AP + P+ + +++IGA+ S AN T +E+S+ V S + V K+ VLL S F L+ G +P V V+Q++ AA+ YSSG Sbjct: 26 FRSLRPPVPLPPPDVPLSFPEFAFSLLPRSSSSSSSSLLPANPALVDAATGEAVSFQAFLSRVRALAGALRSRVGLRGGDVAFVLAPAGLDVPVLYFALLSIGAVVSPANPALTPAEVSRLVSLSGASVAFAVSSTATKLPAGLTTVVLLDS----------------PHFRSLLMDCGQAQGQEPLPVVVVRQSETAAIQYSSG 214
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CL4_ARATH (4-coumarate--CoA ligase 4 OS=Arabidopsis thaliana GN=4CL4 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 56/199 (28.14%), Postives = 95/199 (47.74%), Query Frame = 1 Query: 16 DGIYRSLRPPFVLPSDPSFSMVHFLFRNSASY----SSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLPAVLLGS-KDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIPDVSVKQTDAAALLYSSG 597 D I+RS P +P+ + ++F+ + SS +ID + L+++ ++ + +++ LGI DVV++ PNS +F + FL V +GA+++TAN YT E++KQ K S K++IT L DK+ L VL+ D F +L + T++ + D A+ YSSG Sbjct: 26 DFIFRSKLPDIFIPNH--LPLTDYVFQRFSGDGDGDSSTTCIIDGATGRILTYADVQTNMRRIAAGIHRLGIRHGDVVMLLLPNSPEFALSFLAVAYLGAVSTTANPFYTQPEIAKQAKASAAKMIITKKCLVDKLTNLKNDGVLIVCLDDDGDNGVVSSSDDGCVSFTELTQ--ADETELLKPKISPEDTVAMPYSSG 220
BLAST of CX295738 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.546e-12 Identity = 59/211 (27.96%), Postives = 101/211 (47.87%), Query Frame = 1 Query: 13 RDGIYRSLRPPFVLPS-DPSFSMVHF----LFRNSA------SYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL--GITKKDVVLIFAPNSIQFPICFLGVIAIGAIASTANTVYTVSELSKQVKDSNPKLVITVPELWDKVKGLNLP--AVLLGSKDXXXXXXXXXXXXXXXXFHDLIELSGSVTDIP-DVSVKQTDAAALLYSSG 597 R GIY SLRP LP D S F L ++S + + L+++ S ++L++ + V ++ S R + ++V I +P+S+ P+ +L +++IG + S AN + + SE+S QV+ S P + + K++ +LP VL+ S + F + S S + P V V Q+D AA+L+SSG Sbjct: 20 RTGIYHSLRPSLSLPPIDQPLSAAEFALSLLLKSSPPATAGKNIEALTYLVNSSSGDNLTYGELLRRVRSLAVSLRERFPSLASRNVAFILSPSSLDIPVLYLALMSIGVVVSPANPIGSESEVSHQVEVSEPVIAFATSQTVKKLQSSSLPLGTVLMDSTE----------------FLSWLNRSDSSSVNPFQVQVNQSDPAAILFSSG 214 The following BLAST results are available for this feature:
BLAST of CX295738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295738 ID=CX295738; Name=CX295738; organism=Citrus clementina; type=EST; length=604bpback to top |