CX295750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43 Identity = 84/191 (43.98%), Postives = 124/191 (64.92%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERK 634 YDYLFK++LIGDSGVGK+ LL RF+ + F+ STIG++F R++ +DGK IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W+R + +H ++ M++GNK D+ VS E G+ A + F+ETSA + NV+ AF + I +++K ++ V E + Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKITENR 195
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43 Identity = 91/203 (44.83%), Postives = 130/203 (64.04%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNS---AVPSKERKLMSVKMCLL 661 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R++ +DGK IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W+R + +H ++ M++GNK D+ VS E G+ A + FMETSA NV+NAF + I + KK +E G+S + +++K S C L Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK-LEGNSPQGSSHGVKITVEQQKRTSFFRCSL 206
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43 Identity = 91/203 (44.83%), Postives = 130/203 (64.04%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNS---AVPSKERKLMSVKMCLL 661 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R++ +DGK IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W+R + +H ++ M++GNK D+ VS E G+ A + FMETSA NV+NAF + I + KK +E G+S + +++K S C L Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK-LEGNSPQGSSHGVKITVEQQKRTSFFRCSL 206
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43 Identity = 89/179 (49.72%), Postives = 120/179 (67.04%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGE 595 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +L+GNKSDL V K FA+ + F+ETSA ATNV+ AF + +I + + A GE Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.140e-43 Identity = 88/202 (43.56%), Postives = 127/202 (62.87%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKER--KLMSVKMCLL 661 YDYLFK++LIGDSGVGK+ LL RF+ + F+ STIG++F R++ +DGK IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N++ W+R + +H ++ M++GNK D+ VS E G+ A + F+E SA + NV+ AF + I +++K ++ V E K S CLL Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKITENRSKKTSFFRCLL 206
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 8.020e-43 Identity = 86/187 (45.99%), Postives = 130/187 (69.52%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAM----ETGEDVGN 607 +YDYLFK++LIG+SGVGKS LL RF+ + ++ + STIGV+F +++ +DGK +K QIWDTAGQER+R ITS+YYRG+ G ++VYDVT +F V+ WL+E+ + ++ +L+GNK DL+ V + K FA+ + F+ETSAL++TNV++AF + QI +S++ + + ED GN Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDKGN 190
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42 Identity = 86/171 (50.29%), Postives = 115/171 (67.25%), Query Frame = 2 Query: 47 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL-RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 RA DYDYL K++LIGDSGVGKS LL RF+ F+ +TIG++F R++ +DGK IK QIWDTAGQER+R IT+AYYRGA+G LLVYDVT S+F N+ W+R + H N+ +L+GNK+D+ AV T G++ A++ + F ETSA NV+ F + I Sbjct: 7 RARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 177
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42 Identity = 83/160 (51.88%), Postives = 110/160 (68.75%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 + YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R +NV GK +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R PNIVV+L GNK DL V+ + FA++ L F+ETSAL NV+ AF Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAF 162
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42 Identity = 83/160 (51.88%), Postives = 110/160 (68.75%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 + YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R +NV GK +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R PNIVV+L GNK DL V+ + FA++ L F+ETSAL NV+ AF Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAF 162
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42 Identity = 83/160 (51.88%), Postives = 110/160 (68.75%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 + YD+LFK ++IG +G GKS LL +F N+F +S TIGVEF +R +NV GK +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ ++ WL + R PNIVV+L GNK DL V+ + FA++ L F+ETSAL NV+ AF Sbjct: 3 ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAF 162 The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bpback to top |