CX295750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 5.747e-41 Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R+ ++GK +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + + +L+GNKSD+ V K FA+ ++ F+ETSA ++TNV+ AF + QI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.747e-41 Identity = 84/179 (46.93%), Postives = 118/179 (65.92%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGED 598 YD+L K++LIGDSGVGKS LL RF+ F+ +TIG++F R++ ++GK IK QIWDTAGQER+R IT+AYYRGA+G LLVYDVT +F ++ W+R + H ++ MLIGNK D+ V + GKS A++ + F+ETSA + NV+ AF + I K+ ++T D Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDI----KKRMIDTPND 186
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.747e-41 Identity = 82/169 (48.52%), Postives = 118/169 (69.82%), Query Frame = 2 Query: 53 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEK-ESLFFMETSALEATNVDNAFAEVLTQI 556 ++ YD+LFK+VL+GD+ VGK+ ++ RF FS STIGV+F ++L + GK +K QIWDTAGQER+R IT +YYR A GA+L YD+T+ S+F +V W+ ++R + NIV +LIGNKSDL L VS + +S AE + L +ETSA +++NV+ AF V T++ Sbjct: 12 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.506e-41 Identity = 83/167 (49.70%), Postives = 112/167 (67.07%), Query Frame = 2 Query: 38 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLF-FMETSALEATNVDNAF 535 A +++ DYLFKV+LIGDS VGK+ ++ F +S ++TIGV+F RSL +DGK +K Q+WDTAGQER+R IT +YYR A A++ YD+TR STFE+V W+ E+ + N+V+MLIGNKSDL V ED + AEK L +ETSA E+ N+D F Sbjct: 6 AARTVDENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVF 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.803e-41 Identity = 84/198 (42.42%), Postives = 126/198 (63.64%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERKLMSVKMC 655 YD L K++LIGDSGVGKS LL RF ++F+ +TIG++F R++++ + +K Q+WDTAGQER+R IT+AYYRGA+G LLVYDVT +F N+E W + ++ + + + ++L+GNK DL VSTE G++ A+K + F+E S+ NV+ F V T+I V+K G + G+ + E + S C Sbjct: 8 YDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAK---TKGNESGSGGINIAEGEENSASKC 202
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.803e-41 Identity = 80/179 (44.69%), Postives = 122/179 (68.16%), Query Frame = 2 Query: 41 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKK 577 G + +YD L K+++IGDSGVGKS +L RF N F+ STIGV+F R++ +DGK IK QIWDTAGQER++ IT++YYRGA G ++VYD+T +F +++RWL ++ P+++ +++GNK DL AV + K FA++ ++ METSA E+T +D AF ++ + I + +K Sbjct: 23 GSESHPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIKKSTPQK 201
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.280e-40 Identity = 76/191 (39.79%), Postives = 123/191 (64.40%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERK 634 YD+LFK++LIGDSGVGK+ L+ RF + F+ STIG++F R+++++GK IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W++ ++++ + +L+GNK D+ V E + A + + F ETSA + NVD AF+ + I + T ++ + + ++K Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGTNSKPSSTGLKTSDKK 195
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.672e-40 Identity = 81/169 (47.93%), Postives = 117/169 (69.23%), Query Frame = 2 Query: 53 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEK-ESLFFMETSALEATNVDNAFAEVLTQI 556 ++ YD+LFK+VL+GD+ VGK+ ++ RF FS STIGV+F ++L + GK +K QIWDTAGQER+R IT +YYR A GA+L YD+++ STF +V W+ ++R + NIV +LIGNKSDL L V + +S AE + L +ETSA +++NV+ AF V T++ Sbjct: 10 DEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.672e-40 Identity = 80/187 (42.78%), Postives = 120/187 (64.17%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPS 622 YD+LFK++LIGDSGVGK+ L+ RF + F+ STIG++F R++ ++GK IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W++ ++++ + +L+GNK D+ V E + A + + F ETSA + NVD AF+ + I G GNS+ PS Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDIL------LKTGGRRSGNSSKPS 185
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.725e-40 Identity = 84/192 (43.75%), Postives = 121/192 (63.02%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSK-----KAMETGEDVGNSAV 616 + YD+LFK ++IG++G GKS LL +F +F +S TIGVEF ++ +NV GK +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIV++L GNK DL V+ + FA++ L F+ETSAL NV+ AF + +I + + M +G G++A+ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAAL 194 The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bpback to top |