CX295750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.725e-40 Identity = 84/192 (43.75%), Postives = 121/192 (63.02%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSK-----KAMETGEDVGNSAV 616 + YD+LFK ++IG++G GKS LL +F +F +S TIGVEF ++ +NV GK +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIV++L GNK DL V+ + FA++ L F+ETSAL NV+ AF + +I + + M +G G++A+ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAAL 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.725e-40 Identity = 78/163 (47.85%), Postives = 113/163 (69.33%), Query Frame = 2 Query: 50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLF-FMETSALEATNVDNAF 535 A++++DYLFK++LIGDS VGK+ ++ F ++ ++TIGV+F RSL++DGK +K Q+WDTAGQER+R IT +YYR A A++ YD+TR STFE++ W+ E+ + N+V+MLIGNK DL V ED + AEK L +ETSA E+ N++ F Sbjct: 10 ADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVF 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 4.865e-40 Identity = 84/192 (43.75%), Postives = 121/192 (63.02%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSK-----KAMETGEDVGNSAV 616 + YD+LFK ++IG++G GKS LL +F +F +S TIGVEF ++ +NV GK +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIV++L GNK DL V+ + FA++ L F+ETSAL NV+ AF + +I + + M +G G++A+ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQYGDAAL 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.865e-40 Identity = 80/169 (47.34%), Postives = 116/169 (68.64%), Query Frame = 2 Query: 53 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEK-ESLFFMETSALEATNVDNAFAEVLTQI 556 ++ YD+LFK+VL+GD+ VGK+ ++ RF FS STIGV+F ++L + GK +K QIWDTAGQER+R IT +YYR A GA+L YD+++ STF +V W+ ++R + NIV +LIGNKSDL V + +S AE + L +ETSA +++NV+ AF V T++ Sbjct: 10 DEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.354e-40 Identity = 74/165 (44.85%), Postives = 113/165 (68.48%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 YD+LFK++LIGDSGVGK+ L+ RF + F+ STIG++F R+++++GK IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W++ ++++ + +L+GNK D+ V E A + + F ETSA + NVD AF+ + I Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.354e-40 Identity = 74/165 (44.85%), Postives = 113/165 (68.48%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 YD+LFK++LIGDSGVGK+ L+ RF + F+ STIG++F R+++++GK IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W++ ++++ + +L+GNK D+ V E A + + F ETSA + NVD AF+ + I Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40 Identity = 83/175 (47.43%), Postives = 114/175 (65.14%), Query Frame = 2 Query: 35 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL-RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 MA DYD L K++L+GDSGVGKS LL RFT + F+ +TIG++F + ++VDGK++K QIWDTAGQER+R ITSAYYRGA G +LVYD+T ++F NV W+R + H N+ +L+GNK DL VS G++ A++ F ETSA + +V+ AF V + Sbjct: 1 MARIPGRPDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDV 175
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40 Identity = 88/196 (44.90%), Postives = 123/196 (62.76%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRI----VSKKAMETGEDVGNSAVPSKERK 634 DYD+LFK+++IGDSGVGKS+LL RF N FS +TIGV+F R++ ++G+ +K QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV+RWL E+ + D ++ +L+GNK+D V TED FA + + ETSA E NV+ F + + R ++K+ + DV SK +K Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKRKK 198
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40 Identity = 88/196 (44.90%), Postives = 123/196 (62.76%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRI----VSKKAMETGEDVGNSAVPSKERK 634 DYD+LFK+++IGDSGVGKS+LL RF N FS +TIGV+F R++ ++G+ +K QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV+RWL E+ + D ++ +L+GNK+D V TED FA + + ETSA E NV+ F + + R ++K+ + DV SK +K Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKRKK 198
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40 Identity = 88/196 (44.90%), Postives = 123/196 (62.76%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRI----VSKKAMETGEDVGNSAVPSKERK 634 DYD+LFK+++IGDSGVGKS+LL RF N FS +TIGV+F R++ ++G+ +K QIWDTAGQER+R ITS YYRG G ++VYDVT +F NV+RWL E+ + D ++ +L+GNK+D V TED FA + + ETSA E NV+ F + + R ++K+ + DV SK +K Sbjct: 4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQQQNDVVKLTKNSKRKK 198 The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bpback to top |