CX295750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40 Identity = 77/162 (47.53%), Postives = 112/162 (69.14%), Query Frame = 2 Query: 53 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLF-FMETSALEATNVDNAF 535 +D +D+LFK++LIGDS VGK+ ++ RF F+ ++TIGV+F R++N++GK +K Q+WDTAGQER+R IT +YYR A GA++ YD+TR +FE+V W+ E + N+++MLIGNKSDL + E+ + AEK L +ETSA E+ NVD F Sbjct: 9 DDPFDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVF 170
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.849e-39 Identity = 83/192 (43.23%), Postives = 121/192 (63.02%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSK-----KAMETGEDVGNSAV 616 + YD+LFK ++IG++G GKS LL +F +F +S TIG+EF ++ +NV GK +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIV++L GNK DL V+ + FA++ L F+ETSAL NV+ AF + +I + + M +G G++A+ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGSGIQYGDAAL 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.849e-39 Identity = 79/166 (47.59%), Postives = 112/166 (67.47%), Query Frame = 2 Query: 41 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLF-FMETSALEATNVDNAF 535 G +D +D+LFK++LIGDS VGK+ ++ RF F ++TIGV+F RSLN++GK +K Q+WDTAGQER+R IT +YYR A GA++ YD+TR +FE+V W+ E + N+++ML+GNKSDL + E+ + AEK L +ETSA E+ NVD F Sbjct: 5 GSLEDDPFDFLFKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVF 170
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4A_ECHMU (Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.154e-39 Identity = 84/200 (42.00%), Postives = 124/200 (62.00%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTE-DGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERKLMSVKM 652 D +DYLFK ++IG++G GK+ +L R+T +F ++ TIG EF +R ++VDG +K QIWDTAGQER+R++ +YY AVG LLVYD+T ++F VE+WL + R P +VV+L+GNK DLR T + +FA++ L F+ETSAL N+D+AF T R++ K V S ++ L +V + Sbjct: 4 DRFDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDTAGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLATPGVVVILVGNKKDLRDTDGQVTHWEANTFAQENGLQFIETSALTGENIDDAF----TSCVRVLLSKVKSGELGADRLLVGSNKQHLQAVNL 199
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.154e-39 Identity = 79/187 (42.25%), Postives = 117/187 (62.57%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPS 622 YD+LFK++LIGDSGVGK+ L+ RF + F+ STIG++F R++ ++GK IK Q+WDTAGQER++ IT+AYYRGA+G +LVYD+T +FEN++ W++ ++++ + +L+GNK D+ V E A + + F ETSA + NVD AF + I G GN + PS Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDIL------LKSGGRRSGNHSKPS 185
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.119e-39 Identity = 78/160 (48.75%), Postives = 114/160 (71.25%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 +++DYLFK++LIGDS VGKS L RF + + STIGV+F R++ V+GK +K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV++WL E+ + + ++ +L+GNK DL AV T +++A++ + F+ETSA E+ NV+ AF Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAF 162
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.119e-39 Identity = 78/163 (47.85%), Postives = 111/163 (68.10%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEV 544 +YDYLFK+++IGDSG GKS+LL RF N +S STIGV+F +++ +D IK QIWDTAGQER+R ITS YYRGA G + VYDVT +F+++ E WL+++ + N+ +LIGNK DL VS ++ K AE+ ++ ++E SA +NV+ AF + Sbjct: 3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTI 165
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.119e-39 Identity = 78/162 (48.15%), Postives = 109/162 (67.28%), Query Frame = 2 Query: 53 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLF-FMETSALEATNVDNAF 535 ++++DYLFK++LIGDS VGK+ ++ F + ++TIGV+F R+L +DGK +K Q+WDTAGQER+R IT +YYR A A++ YD+TR STFE+V W+ E+ + N+V+MLIGNK DL V ED AEK L +ETSA E+ N+D F Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVF 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: YPTV3_VOLCA (GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.379e-39 Identity = 86/171 (50.29%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVE-RWLRELRDH-TDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 A D +DY FKV+L+GDSGVGKS +L+RFT F + STIGV+F + L DGK K IWDTAGQER+R +TS+YYRGA G + VYDVTR TFE++E W+RE + T + + M++ NK DL VS+E+G FA + F+ETSA V AF E+L +I Sbjct: 2 AVDSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKI 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.379e-39 Identity = 76/200 (38.00%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERKLMSVKMC 655 +DYD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +++ ++G+ +K QIWDTAGQER+R+IT +YYR A +L YD+T +F + WLRE+ + ++ +L+GNK DL VS + + F+E + ++++ETSA E+ NV+ F ++ R++S+ T + +S +P + + + + C Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLAC---RLISEARQNTLVNNVSSPLPGEGKSISYLTCC 200 The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bpback to top |