CX295750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 5.379e-39 Identity = 76/200 (38.00%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERKLMSVKMC 655 +DYD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +++ ++G+ +K QIWDTAGQER+R+IT +YYR A +L YD+T +F + WLRE+ + ++ +L+GNK DL VS + + F+E + ++++ETSA E+ NV+ F ++ R++S+ T + +S +P + + + + C Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLAC---RLISEARQNTLVNNVSSPLPGEGKSISYLTCC 200
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.379e-39 Identity = 76/200 (38.00%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERKLMSVKMC 655 +DYD+LFK+VLIG++GVGK+ L+ RFT+ F +TIGV+F +++ ++G+ +K QIWDTAGQER+R+IT +YYR A +L YD+T +F + WLRE+ + ++ +L+GNK DL VS + + F+E + ++++ETSA E+ NV+ F ++ R++S+ T + +S +P + + + + C Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLAC---RLISEARQNTLVNNVSSPLPGEGKSISYLTCC 200
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.026e-39 Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYR 562 A+ YD LFK++LIGDSGVGK+ +L RF+ + F+ STIG++F +++ + GK IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+ +WLR + +H + ++ ML+GNK D+ V G+ A + + F ETSA N++ AF + I R Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.026e-39 Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYR 562 A+ YD LFK++LIGDSGVGK+ +L RF+ + F+ STIG++F +++ + GK IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+ +WLR + +H + ++ ML+GNK D+ V G+ A + + F ETSA N++ AF + I R Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.026e-39 Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYR 562 A+ YD LFK++LIGDSGVGK+ +L RF+ + F+ STIG++F +++ + GK IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+ +WLR + +H + ++ ML+GNK D+ V G+ A + + F ETSA N++ AF + I R Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 9.176e-39 Identity = 81/178 (45.51%), Postives = 116/178 (65.17%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESK-STIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAME 586 D YD FKV+L+GDSGVGK+ LL RF F + ST+G++F + L+VDG +K QIWDTAGQER+R++T AYYR A LL+YD+T +F+N++ WL E++++ ++V+ML+GNK D V EDG+ A++ L FMETSA NVD AF + ++ + +K E Sbjct: 59 DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSE 236
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.176e-39 Identity = 76/169 (44.97%), Postives = 113/169 (66.86%), Query Frame = 2 Query: 50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 A+ YD LFK++LIGDSGVGK+ +L RF+ + F+ STIG++F +++ + GK IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+ +WLR + +H + ++ ML+GNK D+ V G+ A + ++ F ETSA N++ AF + I Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDI 170
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.176e-39 Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYR 562 A+ YD LFK++LIGDSGVGK+ +L RF+ + F+ STIG++F +++ + GK IK QIWDTAGQER+ IT++YYRGA+G +LVYD+T +FEN+ +WLR + +H + ++ ML+GNK D+ V G+ A + + F ETSA N++ AF + I R Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILR 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB4A_DANRE (Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.565e-38 Identity = 82/192 (42.71%), Postives = 119/192 (61.98%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSK-----KAMETGEDVGNSAV 616 + YD+LFK ++IG++G GKS LL +F F +S TIGVEF ++ ++V K +K QIWDTAGQER+R++T +YYRGA GALLVYD+T T+ + WL + R NIV++L GNK DL V+ + FA++ L F+ETSAL NV+ AF + +I + + M +G G++A+ Sbjct: 3 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAAL 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.565e-38 Identity = 81/178 (45.51%), Postives = 116/178 (65.17%), Query Frame = 2 Query: 56 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESK-STIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAME 586 D YD FKV+L+GDSGVGK+ LL RF F + ST+G++F + L+VDG +K QIWDTAGQER+R++T AYYR A LL+YD+T +F+N++ WL E++++ ++V+ML+GNK D V EDG+ A++ L FMETSA NVD AF + ++ + +K E Sbjct: 62 DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSE 239 The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bpback to top |