CX295750

Overview
NameCX295750
Unique NameCX295750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAS1_RHIRA (Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20
Identity = 65/197 (32.99%), Postives = 101/197 (51.27%), Query Frame = 2
Query:   74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVM-LIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERKLMSVKMCLL 661
            +K+V++G  GVGKS L  +F ++ F  E   TI   +  + + +D +     + DTAGQE Y A+   Y R   G LLVY +T   +FE +  + +++    D +   M L+GNK DL     VS+++G+  A+     F+ETSA +  NVD AF EV+  I R   ++     +  G    P     + S K C+L
Sbjct:   11 YKLVMVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCV-IDSETALLDVLDTAGQEEYSAMREQYMRNGEGFLLVYSITSRLSFEEITTFYQQICRVKDRDYFPMVLVGNKCDLEGDRQVSSQEGRDLAKNFGCQFIETSAKQRINVDEAFFEVVRDIRRYNKEQETRGHDQFGIQDAPD----VASDKCCIL 202          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RALBA_XENLA (Ras-related protein ralB-A OS=Xenopus laevis GN=ralb-A PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20
Identity = 63/199 (31.66%), Postives = 104/199 (52.26%), Query Frame = 2
Query:   71 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELR--DHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERKLMSVKMCLL 661
            L KV+++G  GVGKS L  +F  +EF +E       +   + + +DG+ ++  I DTAGQE Y AI   Y+R   G LLV+ +T H +F     +  ++      +  I ++++GNKSDL     V  ++ +  AE+  + ++ETSA    NVD  F +++ +I    +KK  E  +  G  +   K +K    + CLL
Sbjct:   14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLIVGNKSDLEDRRQVPMDEARGKAEEWGVQYVETSAKTRANVDKVFFDLMREIR---TKKMSENKDKNGKKS--GKSKKGFKQRCCLL 206          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB28_RAT (Ras-related protein Rab-28 OS=Rattus norvegicus GN=Rab28 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20
Identity = 60/202 (29.70%), Postives = 105/202 (51.98%), Query Frame = 2
Query:   53 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKV-IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERW---LRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRI-VSKKAMETGEDVGNSAVPSKERKLMS 643
            E+  D   K+V++GD   GK++L + F +  F  + K TIG++F  R + + G + +  Q+WD  GQ     +   Y  GA G LLVYD+T + +FEN+E W   ++ + + ++   +V L+GNK DL H+  V  +    F ++        SA    +V   F +V  +I  I ++K  +E  + V  + + +  ++ MS
Sbjct:    6 EESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHMRTVKPDKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIKLNKAEIEQSQRVVKADIVNYNQEPMS 207          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB28_MOUSE (Ras-related protein Rab-28 OS=Mus musculus GN=Rab28 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20
Identity = 57/180 (31.67%), Postives = 93/180 (51.67%), Query Frame = 2
Query:   53 EDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKV-IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERW---LRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKA 580
            E+  D   K+V++GD   GK++L + F +  F  + K TIG++F  R + + G + +  Q+WD  GQ     +   Y  GA G LLVYD+T + +FEN+E W   ++ + + ++   +V L+GNK DL H+  V  +    F ++        SA    +V   F +V  +I  I   KA
Sbjct:    6 EESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHMRTVKADKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIKLNKA 185          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RASB_DICDI (Ras-like protein rasB OS=Dictyostelium discoideum GN=rasB PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20
Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 2
Query:   74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRE--LRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556
            +K+V++G  GVGKS L  +F +N F  E   TI   +  R   VD       I DTAGQ+ Y A+   Y R   G L VYDVT  ++FE +   +RE  +R   +  + ++L+GNK DL +L  V+  +G   A+  S+ F+ETSA +  NVD  F EV+ +I
Sbjct:    7 YKLVVMGGGGVGKSALTIQFIQNHFIEEYDPTIEDSYR-RQCQVDEDTCLLDILDTAGQDDYSAMRDQYMRTGQGFLCVYDVTSRTSFEEINV-VREQIIRVKDNDKVPIVLVGNKCDLENLREVTEGEGSELAKSFSVPFLETSAKKRLNVDECFFEVVREI 167          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4)

HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20
Identity = 65/188 (34.57%), Postives = 106/188 (56.38%), Query Frame = 2
Query:   74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV-VMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERK 634
            +K+V++G  GVGKS L  + T++ F  E   TI   +  + + +D +V    I DTAGQE Y A+   Y R   G LLVY +T  S+ + +  + +++    D + V ++++GNKSDL +   VS +DG + A++ +  F+ETSA +A NV+ AF   L ++ R    K  +T  +  NS   S++ K
Sbjct:   11 YKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYR-KQVVIDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEAF-YTLARLVRDEGGKYNKTLTENDNSKQTSQDTK 196          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RALBB_XENLA (Ras-related protein ralB-B OS=Xenopus laevis GN=ralb-B PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20
Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 2
Query:   71 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELR--DHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPSKERKLMSVKMCLL 661
            L KV+++G  GVGKS L  +F  +EF +E       +   + + +DG+ ++  I DTAGQE Y AI   Y+R   G LLV+ +T H +F     +  ++      +  I ++++GNKSDL     V  ++ +  AE+  + ++ETSA    NVD  F +++    R V  K M   +D  N     K +K    + CLL
Sbjct:   14 LHKVIMVGSGGVGKSALTLQFMYDEF-VEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEDRRQVPMDEARGKAEEWGVQYVETSAKTRANVDKVFFDLM----REVRTKKMSENKD-KNGKKSGKSKKGFKQRCCLL 206          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RRAS2_MOUSE (Ras-related protein R-Ras2 OS=Mus musculus GN=Rras2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 63/190 (33.16%), Postives = 103/190 (54.21%), Query Frame = 2
Query:   29 IAMAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRE-LRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGE 595
            +A AG+R     +  +++V++G  GVGKS L  +F ++ F  +   TI   + T+   +D +  +  I DTAGQE + A+   Y R   G LLV+ VT   +FE + ++ R+ LR        ++LIGNK+DL H   V+ E+G+  A +  + +ME SA    NVD AF E++  I +   ++   + E
Sbjct:    1 MAAAGWRDGSGQEK-YRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSY-TKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQECPPSPE 188          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RRAS2_HUMAN (Ras-related protein R-Ras2 OS=Homo sapiens GN=RRAS2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 63/190 (33.16%), Postives = 103/190 (54.21%), Query Frame = 2
Query:   29 IAMAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRE-LRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGE 595
            +A AG+R     +  +++V++G  GVGKS L  +F ++ F  +   TI   + T+   +D +  +  I DTAGQE + A+   Y R   G LLV+ VT   +FE + ++ R+ LR        ++LIGNK+DL H   V+ E+G+  A +  + +ME SA    NVD AF E++  I +   ++   + E
Sbjct:    1 MAAAGWRDGSGQEK-YRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSY-TKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQECPPSPE 188          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAS2_HYDMA (Ras-like protein RAS2 OS=Hydra magnipapillata GN=RAS2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 62/177 (35.03%), Postives = 99/177 (55.93%), Query Frame = 2
Query:   59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRE-LRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAME 586
            D D  +K+V++G  GVGKS L  +F ++ F  +   TI   +  + + +D KV    I DTAGQE + A+   Y R   G LLV+ VT  S+F+ + R+  + LR        ++L+GNKSDL +   VST + +    K  + ++E+SA +  NVD AF +++  I R  +K ++E
Sbjct:    4 DLDRQYKLVVVGGGGVGKSALTIQFIQSHFVQDYDPTIEDSYRKQCV-IDDKVAHLDILDTAGQEEFSAMRDEYMRTGEGFLLVFSVTDRSSFDEIPRFHTQILRVKDIEEFPMILVGNKSDLENERTVSTAEAQELGRKLKVSYLESSAKQRINVDAAFHDLVRAI-RNANKASVE 178          
The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS1_RHIRA1.127e-2032.99Ras-like protein 1 OS=Rhizomucor racemosus GN=RAS1... [more]
RALBA_XENLA1.127e-2031.66Ras-related protein ralB-A OS=Xenopus laevis GN=ra... [more]
RAB28_RAT1.127e-2029.70Ras-related protein Rab-28 OS=Rattus norvegicus GN... [more]
RAB28_MOUSE1.127e-2031.67Ras-related protein Rab-28 OS=Mus musculus GN=Rab2... [more]
RASB_DICDI1.472e-2038.65Ras-like protein rasB OS=Dictyostelium discoideum ... [more]
RAS2_YEAST1.472e-2034.57Ras-like protein 2 OS=Saccharomyces cerevisiae GN=... [more]
RALBB_XENLA1.922e-2032.16Ras-related protein ralB-B OS=Xenopus laevis GN=ra... [more]
RRAS2_MOUSE4.282e-2033.16Ras-related protein R-Ras2 OS=Mus musculus GN=Rras... [more]
RRAS2_HUMAN4.282e-2033.16Ras-related protein R-Ras2 OS=Homo sapiens GN=RRAS... [more]
RAS2_HYDMA4.282e-2035.03Ras-like protein RAS2 OS=Hydra magnipapillata GN=R... [more]

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Properties
Property NameValue
Genbank descriptionC05075E05SK DroRLeaf1 Citrus clementina cDNA clone C05075E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bp
GAGGAGAGTGTGAAGATATAAAGTTGCAATAGCTATGGCTGGATACAGAG
CTGAAGATGACTATGATTATCTTTTTAAGGTGGTTTTGATCGGTGACTCC
GGTGTCGGCAAGTCCAATTTGCTTTCGAGGTTCACTAGGAACGAGTTTAG
TCTCGAGTCTAAGTCCACAATAGGTGTTGAGTTCGCTACTCGTAGCTTGA
ATGTCGATGGCAAAGTCATCAAAGCTCAGATTTGGGACACCGCCGGCCAA
GAAAGGTACCGTGCCATAACCAGTGCATACTACCGAGGAGCTGTCGGGGC
ACTTCTAGTGTATGACGTCACTCGGCATTCCACATTTGAAAATGTGGAAA
GGTGGTTAAGGGAGTTGAGGGATCACACAGATCCCAACATTGTGGTTATG
CTCATTGGTAATAAATCGGATCTCCGTCACCTGGTGGCTGTCTCAACAGA
GGACGGGAAATCATTTGCTGAGAAGGAATCTCTCTTCTTCATGGAAACTT
CTGCTCTGGAGGCTACTAATGTGGACAATGCATTTGCTGAAGTGCTGACT
CAAATCTACCGTATTGTGAGCAAGAAGGCCATGGAGACAGGTGAGGATGT
AGGAAATTCTGCTGTACCTTCCAAGGAGAGAAAATTGATGTCAGTAAAGA
TGTGTCTGCTGTGAAGAAGGTGGCTGCTGCTCACT
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