CX295750

Overview
NameCX295750
Unique NameCX295750
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAP2B_HUMAN (Ras-related protein Rap-2b OS=Homo sapiens GN=RAP2B PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 55/162 (33.95%), Postives = 89/162 (54.94%), Query Frame = 2
Query:   74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLREL-RDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556
            +KVV++G  GVGKS L  +F    F  +   TI  +F  + + VD      +I DTAG E++ ++   Y +   G +LVY +    +F++++    ++ R      + ++L+GNK DL     VS  +GK+ AE+ S  FMETSA    +VD  FAE++ Q+
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGEGKALAEEWSCPFMETSAKNKASVDELFAEIVRQM 164          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAP2A_PIG (Ras-related protein Rap-2a OS=Sus scrofa GN=RAP2A PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 55/162 (33.95%), Postives = 89/162 (54.94%), Query Frame = 2
Query:   74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLREL-RDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556
            +KVV++G  GVGKS L  +F    F  +   TI  +F  + + VD      +I DTAG E++ ++   Y +   G +LVY +    +F++++    ++ R      + ++L+GNK DL     VS  +GK+ AE+ S  FMETSA    +VD  FAE++ Q+
Sbjct:    4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGEGKALAEEWSCPFMETSAKNKASVDELFAEIVRQM 164          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_XENTR (GTP-binding nuclear protein Ran OS=Xenopus tropicalis GN=ran PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL--RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535
            A+ +    FK+VL+GD G GK+  + R    EF  +  +T+GVE      + +   IK  +WDTAGQE++  +   YY  A  A++++DVT   T++NV  W R+L      NI ++L GNK D+  R + A S      F  K++L + + SA    N +  F
Sbjct:    3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_XENLA (GTP-binding nuclear protein Ran OS=Xenopus laevis GN=ran PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL--RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535
            A+ +    FK+VL+GD G GK+  + R    EF  +  +T+GVE      + +   IK  +WDTAGQE++  +   YY  A  A++++DVT   T++NV  W R+L      NI ++L GNK D+  R + A S      F  K++L + + SA    N +  F
Sbjct:    3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_RAT (GTP-binding nuclear protein Ran OS=Rattus norvegicus GN=Ran PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL--RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535
            A+ +    FK+VL+GD G GK+  + R    EF  +  +T+GVE      + +   IK  +WDTAGQE++  +   YY  A  A++++DVT   T++NV  W R+L      NI ++L GNK D+  R + A S      F  K++L + + SA    N +  F
Sbjct:    3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_PONAB (GTP-binding nuclear protein Ran OS=Pongo abelii GN=RAN PE=2 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL--RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535
            A+ +    FK+VL+GD G GK+  + R    EF  +  +T+GVE      + +   IK  +WDTAGQE++  +   YY  A  A++++DVT   T++NV  W R+L      NI ++L GNK D+  R + A S      F  K++L + + SA    N +  F
Sbjct:    3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_MOUSE (GTP-binding nuclear protein Ran OS=Mus musculus GN=Ran PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL--RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535
            A+ +    FK+VL+GD G GK+  + R    EF  +  +T+GVE      + +   IK  +WDTAGQE++  +   YY  A  A++++DVT   T++NV  W R+L      NI ++L GNK D+  R + A S      F  K++L + + SA    N +  F
Sbjct:    3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_MACFA (GTP-binding nuclear protein Ran OS=Macaca fascicularis GN=RAN PE=2 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL--RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535
            A+ +    FK+VL+GD G GK+  + R    EF  +  +T+GVE      + +   IK  +WDTAGQE++  +   YY  A  A++++DVT   T++NV  W R+L      NI ++L GNK D+  R + A S      F  K++L + + SA    N +  F
Sbjct:    3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_HUMAN (GTP-binding nuclear protein Ran OS=Homo sapiens GN=RAN PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL--RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535
            A+ +    FK+VL+GD G GK+  + R    EF  +  +T+GVE      + +   IK  +WDTAGQE++  +   YY  A  A++++DVT   T++NV  W R+L      NI ++L GNK D+  R + A S      F  K++L + + SA    N +  F
Sbjct:    3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_CHICK (GTP-binding nuclear protein Ran OS=Gallus gallus GN=RAN PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18
Identity = 56/164 (34.15%), Postives = 87/164 (53.05%), Query Frame = 2
Query:   50 AEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDL--RHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535
            A+ +    FK+VL+GD G GK+  + R    EF  +  +T+GVE      + +   IK  +WDTAGQE++  +   YY  A  A++++DVT   T++NV  W R+L      NI ++L GNK D+  R + A S      F  K++L + + SA    N +  F
Sbjct:    3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRKVKAKSI----VFHRKKNLQYYDISAKSNYNFEKPF 161          
The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAP2B_HUMAN5.235e-1833.95Ras-related protein Rap-2b OS=Homo sapiens GN=RAP2... [more]
RAP2A_PIG5.235e-1833.95Ras-related protein Rap-2a OS=Sus scrofa GN=RAP2A ... [more]
RAN_XENTR5.235e-1834.15GTP-binding nuclear protein Ran OS=Xenopus tropica... [more]
RAN_XENLA5.235e-1834.15GTP-binding nuclear protein Ran OS=Xenopus laevis ... [more]
RAN_RAT5.235e-1834.15GTP-binding nuclear protein Ran OS=Rattus norvegic... [more]
RAN_PONAB5.235e-1834.15GTP-binding nuclear protein Ran OS=Pongo abelii GN... [more]
RAN_MOUSE5.235e-1834.15GTP-binding nuclear protein Ran OS=Mus musculus GN... [more]
RAN_MACFA5.235e-1834.15GTP-binding nuclear protein Ran OS=Macaca fascicul... [more]
RAN_HUMAN5.235e-1834.15GTP-binding nuclear protein Ran OS=Homo sapiens GN... [more]
RAN_CHICK5.235e-1834.15GTP-binding nuclear protein Ran OS=Gallus gallus G... [more]

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Properties
Property NameValue
Genbank descriptionC05075E05SK DroRLeaf1 Citrus clementina cDNA clone C05075E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bp
GAGGAGAGTGTGAAGATATAAAGTTGCAATAGCTATGGCTGGATACAGAG
CTGAAGATGACTATGATTATCTTTTTAAGGTGGTTTTGATCGGTGACTCC
GGTGTCGGCAAGTCCAATTTGCTTTCGAGGTTCACTAGGAACGAGTTTAG
TCTCGAGTCTAAGTCCACAATAGGTGTTGAGTTCGCTACTCGTAGCTTGA
ATGTCGATGGCAAAGTCATCAAAGCTCAGATTTGGGACACCGCCGGCCAA
GAAAGGTACCGTGCCATAACCAGTGCATACTACCGAGGAGCTGTCGGGGC
ACTTCTAGTGTATGACGTCACTCGGCATTCCACATTTGAAAATGTGGAAA
GGTGGTTAAGGGAGTTGAGGGATCACACAGATCCCAACATTGTGGTTATG
CTCATTGGTAATAAATCGGATCTCCGTCACCTGGTGGCTGTCTCAACAGA
GGACGGGAAATCATTTGCTGAGAAGGAATCTCTCTTCTTCATGGAAACTT
CTGCTCTGGAGGCTACTAATGTGGACAATGCATTTGCTGAAGTGCTGACT
CAAATCTACCGTATTGTGAGCAAGAAGGCCATGGAGACAGGTGAGGATGT
AGGAAATTCTGCTGTACCTTCCAAGGAGAGAAAATTGATGTCAGTAAAGA
TGTGTCTGCTGTGAAGAAGGTGGCTGCTGCTCACT
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