CX295750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAPA_DICDI (Ras-related protein rapA OS=Dictyostelium discoideum GN=rapA PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17 Identity = 58/166 (34.94%), Postives = 88/166 (53.01%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRE--LRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEK-ESLFFMETSALEATNVDNAFAEVLTQIYR 562 FK+V++G GVGKS L +F + F + TI + + + VD +I DTAG E++ A+ Y + G +LVY + +STF + LRE LR ++ ++L+GNK DL +STE G+ A K +F+E SA NV+ F ++ QI R Sbjct: 6 FKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDSNQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSIISNSTFNELPD-LREQILRVKDCEDVPMVLVGNKCDLHDQRVISTEQGEELARKFGDCYFLEASAKNKVNVEQIFYNLIRQINR 169
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_CAEEL (GTP-binding nuclear protein ran-1 OS=Caenorhabditis elegans GN=ran-1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17 Identity = 52/155 (33.55%), Postives = 83/155 (53.55%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLR-HLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+VL+GD G GK+ + R EF + +T+GVE + + I+ +WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D++ V T +F K++L + + SA N + F Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLA-RVCENIPIVLCGNKVDVKDRKVKAKT---ITFHRKKNLQYYDISAKSNYNFEKPF 160
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAP1_PHYPO (Ras-related protein Rap-1 OS=Physarum polycephalum GN=RAP1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 59/166 (35.54%), Postives = 89/166 (53.61%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRE--LRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEK-ESLFFMETSALEATNVDNAFAEVLTQIYR 562 FK+V++G GVGKS L +F + F + TI + + + VDG+ +I DTAG E++ A+ Y + G +LVY + STF ++ LRE LR ++ ++L+GNK DL +STE G A K F+E SA NV+ F +++ QI R Sbjct: 6 FKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSIIAMSTFNDLPD-LREQILRVKDCDDVPMVLVGNKCDLAEQRVISTEQGDELARKFGGCAFLEASAKNKINVEQIFYDLIRQINR 169
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAP1B_DANRE (Ras-related protein Rap-1b OS=Danio rerio GN=rap1b PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 58/166 (34.94%), Postives = 92/166 (55.42%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRE--LRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEK-ESLFFMETSALEATNVDNAFAEVLTQIYR 562 +K+V++G GVGKS L +F + F + TI + + + VDG+ +I DTAG E++ A+ Y + G LVY +T STF +++ LRE LR ++ ++L+GNK DL V E G++ A + S F+E+SA NV+ F +++ QI R Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQD-LREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQINR 167
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 55/169 (32.54%), Postives = 89/169 (52.66%), Query Frame = 2 Query: 29 IAMAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 +A+ G +A D FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 1 MALPGQQAVDYPS--FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEVSAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEVSAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 58/169 (34.32%), Postives = 95/169 (56.21%), Query Frame = 2 Query: 71 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHT---DPNIV-VMLIGNKSDLRHLVAVSTEDGKSFAEKE----SLFFMETSALEATNVDNAFAEVLTQ 553 + KVV+IG+ VGK+++L R+ F + K TIGV+F S N+ + Q+WDT+GQER+R++ +YYRGA +LV+DVT T +++ W + + T DP + +++GNK D + V TE K+ +L + +TSA + N++ F + Q Sbjct: 7 IIKVVIIGEKSVGKTSILRRYVDKRF-VTLKPTIGVDFVMVSENM----VTLQLWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIILGNKIDDPNRVV--TEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHISNQ 168
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 74 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV W R+L NI ++L GNK D+++ + + +F K++L + E SA N + F Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 164 The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bpback to top |