CX295750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43 Identity = 89/203 (43.84%), Postives = 128/203 (63.05%), Query Frame = 2 Query: 62 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKA---METGEDVGNSAVPSKERKLMSVKMCLL 661 YDYLFK++LIGDSGVGK+ +L RF+ + F+ STIG++F R++ +DGK IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W+R + +H ++ M++GNK D+ VS E G+ A + FMETSA NV+NAF + I + KK G + G P ++++ + LL Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQKRSSFFRCVLL 207
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43 Identity = 87/166 (52.41%), Postives = 117/166 (70.48%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 DYDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +L+GNKSDL V K +A++ + F+ETSA ATNV+ AF + +I Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43 Identity = 95/200 (47.50%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI-YRIVSKKAMETGEDVGNSAVPSKERKLMSVKMC 655 DY YLFK++LIGDSGVGKS LL RF + +S STIGV+F R++ ++GK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT TFENV +WL+E+ N+ +L+GNKSDL V K+FA+ + F+ETSA ++TNV+ AF + T+I R+ + + +T + N VP + C Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDK--NKVVPGSSAPISPKSGC 201
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43 Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPS 622 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +L+GNK DL V K FA+ + F+ETSA ATNV+ +F + +I + + A G + N + S Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQS 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43 Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPS 622 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +L+GNK DL V K FA+ + F+ETSA ATNV+ +F + +I + + A G + N + S Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQS 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43 Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPS 622 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +L+GNK DL V K FA+ + F+ETSA ATNV+ +F + +I + + A G + N + S Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQS 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43 Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPS 622 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +L+GNK DL V K FA+ + F+ETSA ATNV+ +F + +I + + A G + N + S Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQS 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43 Identity = 89/188 (47.34%), Postives = 123/188 (65.43%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGEDVGNSAVPS 622 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +L+GNK DL V K FA+ + F+ETSA ATNV+ +F + +I + + A G + N + S Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQS 194
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.600e-43 Identity = 83/169 (49.11%), Postives = 122/169 (72.19%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQIYRI 565 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++N+DGK+IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT H +F NV++W++E++ + ++ +L+GNK DL V T + +A+ + F+ETSA + NV+ AF + ++I ++ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKL 172
BLAST of CX295750 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 4.702e-43 Identity = 88/166 (53.01%), Postives = 117/166 (70.48%), Query Frame = 2 Query: 59 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETSALEATNVDNAFAEVLTQI 556 +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +L+GNK DL VS E GK+ A++ + F+ETSA +ATNV+ AF + +I Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169 The following BLAST results are available for this feature:
BLAST of CX295750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295750 ID=CX295750; Name=CX295750; organism=Citrus clementina; type=EST; length=685bpback to top |