CX295755

Overview
NameCX295755
Unique NameCX295755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.643e-40
Identity = 78/113 (69.03%), Postives = 91/113 (80.53%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDK-IITTEG---RKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 328
            YL RK       + II ++DLYKFDPW LP+KA FGE+EWYFFSPRDRKYPNG+RPNR + SGYWKATGTDK +I+T G   +KVG+KKALVFY GK PKG K++WIMHEYRL
Sbjct:   34 YLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRL 146          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.263e-37
Identity = 74/131 (56.49%), Postives = 97/131 (74.05%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDK-IITTEGRK-VGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKVNTKLPVCP 388
            YL RKV     S+++I ++D+YK+DPW LP  A+ GEKEWYF+ PRDRKY N SRPNRV+G+G+WKATGTD+ I ++EG K +G+KK+LVFY G+A KG KT+W+MHE+RL   S  +  SK     PV P
Sbjct:   33 YLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSP 163          

HSP 2 Score: 23.8682 bits (50), Expect = 1.263e-37
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 3
Query:  462 DDWVLCRIYKK 494
            D W +CRI+KK
Sbjct:  165 DSWAICRIFKK 175          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.078e-34
Identity = 68/124 (54.84%), Postives = 88/124 (70.97%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKIITT--EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKVN 367
            YL RKV  +     +I ++D+YK+DPW LP  A  GEKEWYF+ PRDRKY N +RPNRV+G G+WKATGTD+ I +    R +G+KK+LVFY G+A KG KT+W+MHE+RL   S  + SS  N
Sbjct:   37 YLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPN 160          

HSP 2 Score: 23.0978 bits (48), Expect = 2.078e-34
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 3
Query:  462 DDWVLCRIYKK 494
            D W +CRI+KK
Sbjct:  181 DAWAICRIFKK 191          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.660e-33
Identity = 64/109 (58.72%), Postives = 82/109 (75.23%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 328
            YL RKV  +   L++I +ID+YK+DPW LP  +  GEKEWYFF  R RKY N  RPNRV+GSG+WKATG DK + +    VG+KK+LV+Y+G A KGTKT+W+MHE+RL
Sbjct:   35 YLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRL 143          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.809e-32
Identity = 67/111 (60.36%), Postives = 79/111 (71.17%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKIITTEG--RKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 328
            YL RKV    FS + I E+DL K +PW LP +A  GEKEWYFFS RDRKYP G R NR + +GYWKATG D+ I +      VG+KK LVFY G+APKG K+NW+MHEYRL
Sbjct:   34 YLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL 144          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.068e-31
Identity = 64/111 (57.66%), Postives = 79/111 (71.17%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKIITTEGRK--VGIKKALVFYVGKAPKGTKTNWIMHEYRL 328
            YL +KV   +FS   I ++DL K +PW LP KA  GEKEWYFF+ RDRKYP G R NR + +GYWKATG D+ I +   K  +G+KK LVFY G+APKG K+ W+MHEYRL
Sbjct:   37 YLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL 147          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.106e-31
Identity = 66/125 (52.80%), Postives = 81/125 (64.80%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKII----------------TTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 328
            YL +K+    F+   IGE+DL K +PW LPSKA  GEKEWYFFS +D KYP G R NR +  GYWKATG D+ I                  + + VG+KK LVFY+G+APKGTKTNW+MHE+RL
Sbjct:   36 YLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL 160          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.741e-31
Identity = 62/130 (47.69%), Postives = 88/130 (67.69%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFG---EKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRKNGSSKVNTKLPV 382
            YL +KV  Q   L +I E+DL K +PW +  +   G   + +WYFFS +D+KYP G+R NR + +G+WKATG DKII +  R++G++K LVFY G+AP G K++WIMHEYRL +    NG + V T+ P+
Sbjct:   33 YLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPM 162          

HSP 2 Score: 21.557 bits (44), Expect = 5.741e-31
Identity = 5/11 (45.45%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  462 DDWVLCRIYKK 494
            + WV+CR+++K
Sbjct:  167 EGWVVCRVFRK 177          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.797e-29
Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFG---EKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 328
            YL +KV      L +I ++DL K +PW +      G   + +WYFFS +D+KYP G+R NR + +G+WKATG DKII + GR++G++K LVFY G+AP G K++WIMHEYRL
Sbjct:   33 YLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 144          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.959e-29
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 2
Query:    2 YLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKIITT--EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 328
            YL  K+     S   I E+DL + +PW LP  A  GE+EWYF+S RDRKYP G R NR + +GYWKATG DK + +   G+ VG+KK LVFY G+AP+G KT W+MHEYRL
Sbjct:   39 YLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRL 149          
The following BLAST results are available for this feature:
BLAST of CX295755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC18_ARATH1.643e-4069.03NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC9_ARATH1.263e-3756.49Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC94_ARATH2.078e-3454.84Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC42_ARATH5.660e-3358.72NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC98_ARATH2.809e-3260.36Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC54_ARATH1.068e-3157.66Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC77_ORYSJ3.106e-3152.80NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC12_ARATH5.741e-3147.69NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC43_ARATH3.797e-2950.00NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC31_ARATH4.959e-2954.95Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC05075E10SK DroRLeaf1 Citrus clementina cDNA clone C05075E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295755 ID=CX295755; Name=CX295755; organism=Citrus clementina; type=EST; length=681bp
ATATCTCTGTCGCAAAGTTGCAGGGCAACATTTTTCGCTGCAAATTATCG
GTGAAATAGATTTGTACAAGTTTGACCCATGGGTTCTACCAAGCAAGGCA
ATTTTTGGTGAGAAAGAATGGTACTTTTTCAGCCCCAGGGATAGAAAATA
TCCAAACGGGTCCCGACCCAACAGAGTATCCGGGTCCGGGTATTGGAAGG
CCACAGGCACCGACAAGATTATCACAACTGAAGGTCGTAAGGTTGGTATC
AAAAAGGCTCTTGTTTTTTACGTAGGCAAAGCTCCAAAAGGCACCAAAAC
CAATTGGATCATGCACGAATATCGACTCTTTGAACCTTCTCGCAAAAATG
GCAGCTCCAAGGTAAATACAAAATTACCCGTATGCCCTGCTCTTCATATT
ATTAACTAGCTTAATCACCCTCTTTAACAAGTTAATTGGGTTTTGTTTAT
TTTTGCAGTTAGATGATTGGGTTCTGTGCAGAATCTATAAGAAGCATTCA
GGTTCCCAAAAACCAGTGTCAGCAACAAGTGTTTCTTCAAGCAAAGAACA
CAGTAATGGTTCTTGTTCATCTTCATCTTCTCATCTTGATGATGTGCTCG
AGTCTTTACCTGACATTGATGACCGATTTTTCGCTTTGCCACGCATGAAC
TCACTCGAGACTTTACAGCAAGAAGACAACA
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