CX295755

Overview
NameCX295755
Unique NameCX295755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15
Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = 2
Query:   41 QIIGEIDLYKFDPWVLPSKAIFGEKE--WYFFSPRDRKYPNGSRPNRVSGSGYWKATG-TDKIITTEG--RKVGIKKALVFYVGKAPKGTKTNWIMHEY 322
            ++I  +D+  F+PW LPSK++   ++  WYFFS ++ KY  G +  R + SG+WK TG T  ++   G   K+G K+ LVF   K   G+KT+W+MHEY
Sbjct:   35 EVISTVDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVF---KNRDGSKTDWVMHEY 130          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 2
Query:   41 QIIGEIDLYKFDPWVLPSKAIFGEKE--WYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKII---TTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEY 322
            ++I  +D+  FDPW LPS +    ++  WYFF  ++ KY  G R  R + SG+WK TG    I   T +  K+G K+ LVF   K   G+K++W MHEY
Sbjct:   35 EVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVF---KNHGGSKSDWAMHEY 130          
BLAST of CX295755 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13
Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 2
Query:   41 QIIGEIDLYKFDPWVLPSKAIFGEKE--WYFFSPRDRKYPNGSRPNRVSGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLF 331
            + I  + + + DPW LP ++    K+  W FF P++ KY  G +  R + SG+WK+TG  K I    +++G KK L+FY  K    +K++W++HEY  F
Sbjct:   35 RFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMRNRQQIGEKKILMFYTSKE---SKSDWVIHEYHGF 130          
The following BLAST results are available for this feature:
BLAST of CX295755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC4_ARATH1.829e-1541.41NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC5_ARATH1.004e-1340.40NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC3_ARATH2.236e-1336.36NAC domain-containing protein 3 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC05075E10SK DroRLeaf1 Citrus clementina cDNA clone C05075E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295755 ID=CX295755; Name=CX295755; organism=Citrus clementina; type=EST; length=681bp
ATATCTCTGTCGCAAAGTTGCAGGGCAACATTTTTCGCTGCAAATTATCG
GTGAAATAGATTTGTACAAGTTTGACCCATGGGTTCTACCAAGCAAGGCA
ATTTTTGGTGAGAAAGAATGGTACTTTTTCAGCCCCAGGGATAGAAAATA
TCCAAACGGGTCCCGACCCAACAGAGTATCCGGGTCCGGGTATTGGAAGG
CCACAGGCACCGACAAGATTATCACAACTGAAGGTCGTAAGGTTGGTATC
AAAAAGGCTCTTGTTTTTTACGTAGGCAAAGCTCCAAAAGGCACCAAAAC
CAATTGGATCATGCACGAATATCGACTCTTTGAACCTTCTCGCAAAAATG
GCAGCTCCAAGGTAAATACAAAATTACCCGTATGCCCTGCTCTTCATATT
ATTAACTAGCTTAATCACCCTCTTTAACAAGTTAATTGGGTTTTGTTTAT
TTTTGCAGTTAGATGATTGGGTTCTGTGCAGAATCTATAAGAAGCATTCA
GGTTCCCAAAAACCAGTGTCAGCAACAAGTGTTTCTTCAAGCAAAGAACA
CAGTAATGGTTCTTGTTCATCTTCATCTTCTCATCTTGATGATGTGCTCG
AGTCTTTACCTGACATTGATGACCGATTTTTCGCTTTGCCACGCATGAAC
TCACTCGAGACTTTACAGCAAGAAGACAACA
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