CX295756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 54/153 (35.29%), Postives = 76/153 (49.67%), Query Frame = 2 Query: 23 STVVVSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 S+ +SDGAAA++++S + LGL V A+IR A P P A+ AGL S I +E+NEAF+ + LP I + LL E+VN +GGA++LGHPLGCSGARI TL+ ++ + Sbjct: 237 SSSALSDGAAAMLIMSESRAASLGLPVRARIRAMAVVGCDPSIMGYGPVPATKLALKRAGLSLSDIGLFELNEAFAAQT---------------LP-----------CIKDLGLLEQIDEKVNLNGGAIALGHPLGCSGARISTTLINLMESR 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 54/149 (36.24%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGAAA++++S + LGL AKIR A A P KA+ AGL ID +E+NEAF+ ++ LP + + L + E+VN +GGA++LGHPLGCSGARI TLL ++ K Sbjct: 241 LSDGAAAMLVMSADRAKALGLTPRAKIRAMAVAGCDAAIMGYGPVPATQKALKRAGLTIGDIDLFELNEAFAAQS---------------LP-----------CVKDLGLQDVVDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEEK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14 Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGAAA++++S + ELGL+ A++R A P P A+ AGL S I +E+NEAF+ + +LP I + L+ E++N +GGA++LGHPLGCSGARI TLL ++ K Sbjct: 241 LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPAIMGYGPVPASKLALKKAGLSVSDIGVFEMNEAFAAQ---------------ILP-----------CIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: YQEF_ECOLI (Probable acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=yqeF PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.969e-14 Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLL 463 ++DGAAA++++S K L L V+A+IR FA P AP + + G + +++D E NEAF+ + A++ K+L D +VN +GGA++LGHP+G SG RILV+L+ Sbjct: 249 INDGAAAVMMMSEAKARALNLPVLARIRAFASVGVDPALMGIAPVYATRRCLERVGWQLAEVDLIEANEAFAAQ-----------------------------ALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLV 362
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.969e-14 Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++ K LGL + A+IR A A P KA+A AGL + +D E+NEAF+ ++ LP + + L + E++N +GGA++LGHPLGCSGARI TL+ ++ K Sbjct: 241 LSDGASAMLVMEESKARALGLTIRARIRSMAVAGCDAAIMGYGPVPATKKALARAGLSVADLDLIELNEAFAAQS---------------LP-----------CVKDLGLQDVVDEKINLNGGAIALGHPLGCSGARISTTLINLMEEK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.571e-14 Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++ K LGL + A+IR A A P KA+A AGL + +D E+NEAF+ ++ LP + + L + E++N +GGA++LGHPLGCSGARI TL+ ++ K Sbjct: 241 LSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGLTVADLDVIELNEAFAAQS---------------LP-----------CVKDLGLQDVVEEKINLNGGAIALGHPLGCSGARISTTLINLMEEK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.571e-14 Identity = 51/152 (33.55%), Postives = 76/152 (50.00%), Query Frame = 2 Query: 23 STVVVSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRH 478 S+ +SDGA+A++++S + ELGL + A+++ A A P P KA+ AGL I E+NEAF+ ++ LP + LL E+VN +GGA++LGHPLGCSG+RI TL+ + H Sbjct: 237 SSSALSDGASAMLVMSEHRAKELGLTIRARVKSMAVAGCDPSIMGYGPVPATQKALKRAGLSIDDIGMVELNEAFAAQS---------------LP-----------CAKDLGLLDKIDEKVNLNGGAIALGHPLGCSGSRISTTLINQMEH 362
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_ECOL6 (3-ketoacyl-CoA thiolase OS=Escherichia coli O6 GN=fadA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.571e-14 Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGAAA++++S + +LGL+ A +R A P P A+ AGL AS I +E+NEAF+ + +LP I + L+ E++N +GGA++LGHPLGCSGARI TLL ++ K Sbjct: 241 LSDGAAAMLVMSESRARDLGLKPRACVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQ---------------ILP-----------CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: FADA_PSEHT (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fadA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14 Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 +SDGA+A++++S K ELGL + A+I+ A A P P KA+A AG+ + E+NEAF+ ++ LP + + L+ + E+VN +GGA++LGHPLGCSG+RI +L+ ++ K Sbjct: 241 LSDGASAMLVMSEAKAKELGLPIRARIKAMAVAGCDPSIMGYGPVPASKKALAQAGITIDDLGVVELNEAFAAQS---------------LP-----------VMKDLGLMDVVDEKVNLNGGAIALGHPLGCSGSRISTSLIHLMEDK 363
BLAST of CX295756 vs. ExPASy Swiss-Prot
Match: THIL_RHIME (Acetyl-CoA acetyltransferase OS=Rhizobium meliloti GN=phbA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 49/149 (32.89%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 35 VSDGAAALVLVSGVKVLELGLQVIAKIRGFADAAQAPEWFTTAPSLVIPKAIANAGLEASQIDYYEINEAFSVRNHVPT**CR*YPKVSLLPFHVLTSSLQVVAIANQKLLGLDPEQVNAHGGAVSLGHPLGCSGARILVTLLGVLRHK 481 ++DGAAA +L++ + G+Q +A+I +A A P+ T P KA+ AG + I+ E NEAF+ + A A K LG DP VN +GGA+++GHP+G SGAR+L TLL ++ + Sbjct: 250 LNDGAAAALLMTEAEAARRGIQPLARIVSWATAGVDPQIMGTGPIPASRKALEKAGWSVADIELVEANEAFAAQ-----------------------------ACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARVLNTLLFEMKRR 369 The following BLAST results are available for this feature:
BLAST of CX295756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295756 ID=CX295756; Name=CX295756; organism=Citrus clementina; type=EST; length=672bpback to top |