CX295764

Overview
NameCX295764
Unique NameCX295764
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGE-MSLKRWVNDSLPIS-IMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARL 432
            L +D+  ++ DFG+A+L   +++   T+   TIGYMAPEY   G ++ + DVYSFG++++EI      ++ + +G+ + L  + N+ +    +M VVD+ L    D     KE    +V  +A+ C+S SP +R    E +A L
Sbjct:  815 LDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDR----KE--AEAVIKVALVCSSASPTDRPLMSEVVAML 952          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 45/133 (33.83%), Postives = 66/133 (49.62%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVND-SLPISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDER 402
            +  DM  RLGDFG+A+L         T  + TIGYMAPE  R G  S+  DV++FG++L+EI + ++PTD   SG   +  WV +      I++ +D  L S  D       L +  +      C    P+ R
Sbjct:  499 IDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTD---SGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLL------CCHHKPESR 622          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLA-TIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGE----MSLKRWVNDSLPISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDER 402
            L  +M  ++ DFG A+L   DE+   T+ +A T GYMAPEY   GQIS + DVYSFG+ML+E+ + +R  +  F GE     + KRWV     I    ++D  L+    N  +        +  + + C  E+  +R
Sbjct:  481 LDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER--NNSFEGEGLAAFAWKRWVEGKPEI----IIDPFLIENPRNEII-------KLIQIGLLCVQENSTKR 604          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12
Identity = 51/150 (34.00%), Postives = 79/150 (52.67%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLS-GDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF-SGEMSLKRWVNDSL--PISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVKIR 444
            L  +  A+L DFG+AK    GD+S   T+ + T GY APEY   G ++T+ DVYSFG++L+E+ + +R  D+   SGE +L  W    L     I  V+D  L     + +  +E C   V +L++ C +     R N  E ++ L  I+
Sbjct:  211 LDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRL----QDQYSMEEAC--KVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12
Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKL-LSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF-SGEMSLKRWVNDSLPI--SIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVKIRDTL 453
            L  D  A+L DFG+A+    GD S   T+ + T GY APEY   G ++   DVYSFG++L+EI + KR  D    + E +L  W    L     ++ +VD  L    D  ++ +E     + S+AV+C S  P  R    + +  L +++D L
Sbjct:  210 LDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRL----DTQYLPEEAV--RMASVAVQCLSFEPKSRPTMDQVVRALQQLQDNL 356          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12
Identity = 44/150 (29.33%), Postives = 76/150 (50.67%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSLPISIM--NVVDQNLLSRED----NHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVK 438
            + E+  A +GDFG+AK++    S   +    + GY+APEY    +++ + D+YSFG++L+E+ T K P   +  G   L  W  + +    +   ++D  L   ED    NH +       +V  +AV CT  SP +R   +E +  L++
Sbjct:  960 IDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGG-DLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMI-------TVTKIAVLCTKSSPSDRPTMREVVLMLIE 1101          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12
Identity = 34/78 (43.59%), Postives = 50/78 (64.10%), Query Frame = 1
Query:   25 ARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTD-EIFSGEMSLKRWV 255
            A++ DFG+AKLL  + S   T+ + T GY+APEY   G ++ + D+YSFGI++MEI T + P D     GE +L  W+
Sbjct:  294 AKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWL 371          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12
Identity = 45/146 (30.82%), Postives = 78/146 (53.42%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSLPISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVKIR 444
            L E++ A++ DFG ++L+  D+    T    T+GY+ PEY   G ++ + DVYSFG++LME+ + ++     F    S K  V+  +     N + + +  +  N +  +E+  S+   +AVECT    +ER + KE  A L  +R
Sbjct:  541 LDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKAL--CFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESA--RIAVECTRIMGEERPSMKEVAAELEALR 682          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.811e-12
Identity = 51/163 (31.29%), Postives = 83/163 (50.92%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLA-TIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSL-----------PISIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVKIRDTLLS 459
            +  DM   +GDFG+A++L  D+S   T T+  T GY+APE   +   S E DVYS+G++L+E+ T KR  D  F  ++++  WV   L           PI    +VD+ L ++       +E  I  V  LA+ CT + P+ R + ++ +  L  +   + S
Sbjct:  929 MDSDMEPHIGDFGLARIL--DDSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRSFPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTK------LREQAI-QVTDLALRCTDKRPENRPSMRDVVKDLTDLESFVRS 1082          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12
Identity = 50/180 (27.78%), Postives = 87/180 (48.33%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKL-LSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIF-SGEMSLKRWVNDSLPI--SIMNVVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARLVKIRDTLLSKVEMVPA*VCQLLFLFSLEARKHFE 534
            L  D  A+L DFG+A+    G++S   T+ + T GY APEY   G ++   DVYSFG++L+E+   ++  D    + E +L  W    L     ++ +VD  L S+       +      + S+AV+C S  P  R    + +  LV+++D+++    + P  V     L  L+    ++
Sbjct:  205 LDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVR------LASIAVQCLSFEPKSRPTMDQVVRALVQLQDSVVKPANVDPLKVKDTKKLVGLKTEDKYQ 378          
The following BLAST results are available for this feature:
BLAST of CX295764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
RKF1_ARATH1.262e-1232.64Probable LRR receptor-like serine/threonine-protei... [more]
LRKA3_ARATH1.262e-1233.83Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK40_ARATH1.262e-1234.31Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
APK1A_ARATH1.262e-1234.00Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
BIK1_ARATH2.152e-1233.33Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y2317_ARATH2.811e-1229.33Probable leucine-rich repeat receptor-like protein... [more]
Y1154_ARATH2.811e-1243.59Probable serine/threonine-protein kinase At1g01540... [more]
WAK5_ARATH2.811e-1230.82Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
PEPR2_ARATH2.811e-1231.29Leucine-rich repeat receptor-like protein kinase P... [more]
Y3545_ARATH3.671e-1227.78Probable receptor-like protein kinase At3g55450 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075F07SK DroRLeaf1 Citrus clementina cDNA clone C05075F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295764 ID=CX295764; Name=CX295764; organism=Citrus clementina; type=EST; length=729bp
CGAGGGCTACATGAAGACATGGTTGCACGTTTGGGTGATTTTGGTATTGC
AAAGCTCTTAAGTGGAGATGAATCCATGAAACATACACAAACACTTGCCA
CAATAGGTTACATGGCACCAGAGTATGGAAGGGAAGGACAAATATCGACA
GAAGGTGACGTGTACAGCTTCGGAATTATGTTAATGGAAATATTTACAAG
GAAGAGACCCACGGATGAAATTTTTTCTGGAGAGATGAGCTTAAAACGTT
GGGTTAATGACTCATTACCTATTTCAATAATGAATGTTGTGGACCAAAAC
TTACTGAGTAGAGAAGACAATCATTTTGTTGCCAAGGAGCTTTGTATATC
ATCGGTGTTCAGTTTAGCTGTGGAATGCACAAGCGAATCACCTGATGAAA
GGATCAACGCAAAGGAAACTTTAGCCAGACTCGTAAAAATTAGAGACACA
CTGTTGTCGAAAGTTGAAATGGTCCCAGCATAAGTCTGTCAGTTGCTTTT
CTTGTTTTCATTGGAGGCTCGAAAACACTTTGAACCATGGCCTTGAATTA
GTTTGGAGCATTGGATACTAGAAAAGCTCATCACAAACCAAATAACGTTA
GTTGCAGTTCTGGAGGGATAGGGATTGCAAGTTGCTGAGCATCTGGGAAT
TGCAAGAGCTGCAGTTGTCGCTTTTGGACCCCGAAGCATGAAGCTTGCAC
TGTCACTTCATATTCCAAGCTTCTTTCAG
back to top