CX295764

Overview
NameCX295764
Unique NameCX295764
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSLPISIMNVVDQNLLSREDNHFVAKEL-------CISSVFSLAVECTSESPDERINAKETLARL 432
            L E+  A +GDFG+AKL++ ++S   T    TIG++APEY   G+ S + DV+ +G+ML+E+ T ++  D        L R  ND   I +++ V + L  ++    V  EL        +  +  +A+ CT  S  ER    E +  L
Sbjct:  410 LDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFD--------LARLANDD-DIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRML 549          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTDEIFSGEMSLKRWVNDSLPISIMNVVDQNLLSREDNHFVAKEL-------CISSVFSLAVECTSESPDERINAKETLARL 432
            L E+  A +GDFG+AKL++ ++S   T    TIG++APEY   G+ S + DV+ +G+ML+E+ T ++  D        L R  ND   I +++ V + L  ++    V  EL        +  +  +A+ CT  S  ER    E +  L
Sbjct:  429 LDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFD--------LARLANDD-DIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRML 568          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 49/146 (33.56%), Postives = 75/146 (51.37%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKRPTD---EIFSGEMSLKRWVNDSLPISIMN-VVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDERINAKETLARL 432
            L E+  A +GDFG+AKL+   ++   T    TIG++APEY   G+ S + DV+ +GIML+E+ T +R  D        ++ L  WV   L    +  +VD +L      ++  +EL    V  +A+ CT  SP ER    E +  L
Sbjct:  437 LDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDL----QTNYEEREL--EQVIQVALLCTQGSPMERPKMSEVVRML 576          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 29/67 (43.28%), Postives = 45/67 (67.16%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLATIGYMAPEYGREGQISTEGDVYSFGIMLMEIFTRKR 207
            L +D   R+ DFG+A+L   D++   T    T+GYMAPEY   G+++ + DVYSFG++++E+ T KR
Sbjct:  456 LEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKR 522          
BLAST of CX295764 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11
Identity = 44/141 (31.21%), Postives = 74/141 (52.48%), Query Frame = 1
Query:    7 LHEDMVARLGDFGIAKLLSGDESMKHTQTLA-TIGYMAPEYGREGQISTEGDVYSFGIMLMEI-------FTRKRPTDEIFSGEMSLKRWVNDSLPISIMN-VVDQNLLSREDNHFVAKELCISSVFSLAVECTSESPDER 402
            L  DM  ++ DFG+A++   D+S  +T+ +A T GYM PEY R+GQ ST  DVYSFG++++EI       F  +  T        + + W NDS P+ +++  + +N  + E          ++    +A+ C   +P +R
Sbjct:  469 LDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDS-PLELVDPTISENCETEE----------VTRCIHIALLCVQHNPTDR 598          
The following BLAST results are available for this feature:
BLAST of CX295764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
SERK5_ARATH9.042e-1131.54Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH9.042e-1131.54Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK1_ARATH9.042e-1133.56Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK3_ARATH9.042e-1143.28Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK14_ARATH9.042e-1131.21Cysteine-rich receptor-like protein kinase 14 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05075F07SK DroRLeaf1 Citrus clementina cDNA clone C05075F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295764 ID=CX295764; Name=CX295764; organism=Citrus clementina; type=EST; length=729bp
CGAGGGCTACATGAAGACATGGTTGCACGTTTGGGTGATTTTGGTATTGC
AAAGCTCTTAAGTGGAGATGAATCCATGAAACATACACAAACACTTGCCA
CAATAGGTTACATGGCACCAGAGTATGGAAGGGAAGGACAAATATCGACA
GAAGGTGACGTGTACAGCTTCGGAATTATGTTAATGGAAATATTTACAAG
GAAGAGACCCACGGATGAAATTTTTTCTGGAGAGATGAGCTTAAAACGTT
GGGTTAATGACTCATTACCTATTTCAATAATGAATGTTGTGGACCAAAAC
TTACTGAGTAGAGAAGACAATCATTTTGTTGCCAAGGAGCTTTGTATATC
ATCGGTGTTCAGTTTAGCTGTGGAATGCACAAGCGAATCACCTGATGAAA
GGATCAACGCAAAGGAAACTTTAGCCAGACTCGTAAAAATTAGAGACACA
CTGTTGTCGAAAGTTGAAATGGTCCCAGCATAAGTCTGTCAGTTGCTTTT
CTTGTTTTCATTGGAGGCTCGAAAACACTTTGAACCATGGCCTTGAATTA
GTTTGGAGCATTGGATACTAGAAAAGCTCATCACAAACCAAATAACGTTA
GTTGCAGTTCTGGAGGGATAGGGATTGCAAGTTGCTGAGCATCTGGGAAT
TGCAAGAGCTGCAGTTGTCGCTTTTGGACCCCGAAGCATGAAGCTTGCAC
TGTCACTTCATATTCCAAGCTTCTTTCAG
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