CX295766

Overview
NameCX295766
Unique NameCX295766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23
Identity = 55/103 (53.40%), Postives = 75/103 (72.82%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            PL+WN+R KIA GAA GL++LH  +   I+RD K++NILLD  +TAKISDFGLA+     +Q+ +T+R++GT  Y APE    G +  KSD+Y FGVVL+EI+
Sbjct:  283 PLSWNMRCKIAQGAANGLSYLH--ENHHIHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEII 382          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.299e-23
Identity = 57/110 (51.82%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  319 GGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQVIY-RDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            G  +  PL+W  R  I +  A+GLA+LH   K  IY RD K +NILLD    A+++DFGLAK      +SH+TTRV GT+GY APEY   G L  KSDVY FGVV++EI+
Sbjct:  388 GETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREG-ESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 496          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 1
Query:  313 MAGGASVQPLAWNIRLKIAIGAARGLAFLHTSDKQ-VIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            ++G  S  PL+W  RL+IA   A+GL +LH   K  +I+RD K+ NILLD ++ AK+ DFGL++  P  S++HV+T V G+ GY  PEY  T  L  KSDV+ FGVVL+EI+
Sbjct:  676 LSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEII 787          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = 1
Query:  310 GMAGGASVQPLAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQAYEP 660
            G+ G      L WN R+KIA GAA+GL FLH      +++RD ++SN+LL   + AK++DF L       +    +TRV+GT+GY APEY  TG +  KSDVY FGVVL+E+L   +P
Sbjct:  163 GVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKP 280          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 55/103 (53.40%), Postives = 77/103 (74.76%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W  R  IA+G+ARGLA+LH   D+++I+RD KA+NILLD  + A + DFGLAKL  + + SHVTT V GT G+ APEY++TG    K+DV+G+GV+L+E++
Sbjct:  390 LDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 491          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W++R +I  G ARGL +LH  S  ++I+RD KASNILLD     K++DFG+A+L         T+RV+GTYGY APEYV  G    KSDVY FGV+L+E++
Sbjct:  434 LTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMI 536          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 53/103 (51.46%), Postives = 72/103 (69.90%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTS-DKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            + W +  KIA+  AR L++LH     +V++RD K SNILLD +Y A +SDFGL+KL    SQSHVTT V GT+GY APEY  T  +  K+DVY +G+VL+E++
Sbjct:  354 IEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKL-LGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELI 455          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 54/103 (52.43%), Postives = 75/103 (72.82%), Query Frame = 1
Query:  337 PLAWNIRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            PL+W++R KIA GAA G+ FLH  +   I+RD K++NILLD ++TAKISDFGLA+     +Q+ +T+R++GT  Y APE    G +  KSD+Y FGVVL+EI+
Sbjct:  282 PLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEII 381          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHTSDK-QVIYRDFKASNILLDGSYTAKISDFGLAKLGPS--ASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILQ 648
            L W  R +I  G ARGL +LH   + ++++RD KASN+LLD +   KI+DFG+AKL  +   SQ+  T++V GTYGY APEY  +G   VK+DV+ FGV+++EI++
Sbjct:  438 LDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIK 543          
BLAST of CX295766 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 52/103 (50.49%), Postives = 68/103 (66.02%), Query Frame = 1
Query:  340 LAWNIRLKIAIGAARGLAFLHT-SDKQVIYRDFKASNILLDGSYTAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEIL 645
            L W++R  I  G ARGL +LH  S  ++I+RD KASNILLD     K++DFG+A+L         T+RV+GTYGY APEY   G    KSDVY FGV+L+E++
Sbjct:  439 LTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMI 541          
The following BLAST results are available for this feature:
BLAST of CX295766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
IRAK4_BOVIN7.120e-2353.40Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y1105_ARATH9.299e-2351.82Probable receptor-like protein kinase At1g11050 OS... [more]
Y4245_ARATH1.214e-2249.11Probable LRR receptor-like serine/threonine-protei... [more]
Y2197_ARATH1.214e-2245.76Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
SERK4_ARATH1.214e-2253.40Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK36_ARATH1.586e-2251.46Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
RPK1_ARATH3.533e-2251.46Probable LRR receptor-like serine/threonine-protei... [more]
IRAK4_HUMAN3.533e-2252.43Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
CRK41_ARATH6.027e-2248.11Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK37_ARATH6.027e-2250.49Cysteine-rich receptor-like protein kinase 37 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05075F09SK DroRLeaf1 Citrus clementina cDNA clone C05075F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295766 ID=CX295766; Name=CX295766; organism=Citrus clementina; type=EST; length=688bp
AACCAGTCAGACAACGTCTACTGGGGTTTCTCGCGGCAGCAATGTCTCTG
GTAACAGCCGTTTCTCTGCATCGAGTGGGGATGAGTCTTATCCCAATGGG
CAGATCTTGCCCACCCCAAACTTGAGGATCTTCACTTTTGTAGAGCTGAG
GGCGGCAACAAGGAACTTTAAAAGTGATACCGTGCTTGGTGAGGGAGGTT
TCGGGAAGGTCTTCAAAGGTTGGCTGGATGAGAAAGCACCTGGGAAAAGT
GGAAGTGGTACTGTAATTGCTGTCAAAAAATTGAATTCTGAGAGCTTGCA
AGGTTTTGAGGAATGGCAGGGGGTGCTTCTGTTCAGCCACTTGCATGGAA
CATTAGACTTAAGATTGCCATCGGAGCAGCTAGAGGCTTGGCTTTTTTGC
ATACATCAGATAAGCAAGTTATCTACAGAGATTTCAAAGCATCAAACATA
CTGCTTGATGGGTCCTACACTGCCAAGATCTCAGATTTTGGCTTGGCAAA
ATTGGGTCCTTCAGCTAGTCAGTCTCATGTGACTACCCGAGTTATGGGCA
CATATGGTTATGCTGCTCCTGAGTATGTTGCCACAGGACACTTGTATGTG
AAGAGTGATGTGTATGGTTTTGGGGTTGTTTTGGTAGAGATACTACAGGC
TTACGAGCCCTGGATACAACCGTCCAGTGGTCACATAT
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