CX295767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26 Identity = 57/133 (42.86%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 62 SKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 457 +KR+ EL L S SA PV D D+ +W I GP D+P++G F VS+ FP +YPF PP + F + ++HPN++ +G+ICLDILKE+WS + +LLS+ SLL +PN PL A ++ D +Y Sbjct: 10 TKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.184e-25 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 59 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 487 A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQIVQK 161
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 56/158 (35.44%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 56 MASKRINKELKDLQKDPPASCSAGPV-ADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 487 MA +R+ KE K+L ++ P +AGP DD F W I GP +PF GG++ ++ FP DYP PP + F + FHPN+ +G++C+ IL E+WSP ++ K+LLS+ S+L +PN + + M++ DR +Y R +K Sbjct: 5 MALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 59 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 487 A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 59 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 487 A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 59 ASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQK 487 A KR+ E K L +PP AGP+ ++ F W+A IMGP D+ F GVF + FP DYP PPK+ F ++FHPNI +G +C+ IL E+WSP ++ K+LLS+ S+L +PN + + + M++ DR ++ A+ QK Sbjct: 5 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 54/145 (37.24%), Postives = 86/145 (59.31%), Query Frame = 2 Query: 2 RIHQTQTLRPQSLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 436 ++ Q + R + + SKR+ +EL+ L +A P D++F W AT+ GP D+ + + +++ FP DYP+KPP V F T +HPN++ +G+ICLDILKE W+ + + +LLS+ SLL +PN PL + A M+ Sbjct: 12 QVRQKERPRDMTTSKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW 156
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 58/130 (44.62%), Postives = 79/130 (60.77%), Query Frame = 2 Query: 47 NSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 436 +SQ KR+ EL L SA P D++F W+ TI G D+ F G + +S+ F DYPFKPPKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 32 DSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW 161
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25 Identity = 58/158 (36.71%), Postives = 90/158 (56.96%), Query Frame = 2 Query: 17 QTLRPQSLLRNSQMA---------SKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 460 Q P + +NS A +KR+ EL L SA P +D ++ HW TI GPSD+ + G F +S+ FP +YP+ PP + F + ++HPN++ +G+ICLDILK++WS + +LLS+ SLL +PN PL + A ++ D +Y+ Sbjct: 6 QNQNPHTNSKNSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYK 163
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.498e-25 Identity = 56/150 (37.33%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 41 LRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 490 ++++ SKR++KEL +L SA P +++F W TI GP ++ ++G + +S+ FP YP+ P V F T FHPN++ G+ICLDILK++WS + +LLSI SLL +PN + PL + A M+ D+ +Y+ ++ +K+ Sbjct: 27 VKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEKH 175 The following BLAST results are available for this feature:
BLAST of CX295767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295767 ID=CX295767; Name=CX295767; organism=Citrus clementina; type=EST; length=692bpback to top |