CX295767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 2 Query: 50 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG*E-GLGCT 520 S +++ +EL++++ PP D+ QA I GP+ +P+A G+F V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A + G+G T Sbjct: 12 SPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPAKCGVGAT 169
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 2 Query: 50 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG*E-GLGCT 520 S +++ +EL++++ PP D+ QA I GP+ +P+A G+F V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A + G+G T Sbjct: 12 SPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPAKCGVGAT 169
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23 Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 71 INKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 499 + KE+ L DPP P +D+ +I GP +P+AGGVF + + D+P PP+ F TK+FHPN+ G IC+++LK W L + VLL+I LL PNP+ L E + D +Y + A T+ +AMG Sbjct: 16 VYKEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTEIHAMG 158
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.225e-22 Identity = 52/143 (36.36%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 65 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 493 K++ +E+ L DPP +D+ QA+I GP+ +P+ GG+F + + D+P PPK F TK+FHPN+ NG IC++ LK+ W P L I +VLL++ LL PNP+ L E + Y A+ +T+ +A Sbjct: 17 KQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPTGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHA 159
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.225e-22 Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 2 Query: 50 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 493 S +++ +EL++++ PP D+ QA I GP+ +P+A G+F V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A Sbjct: 12 SPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22 Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 56 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIA-----HMYKTDRAKYETTARSWTQK 487 M S + E K+L +P D++ W + GP D+ + GG+F I FPP YP++PP++ F ++++HPNI S+G +C+ IL +EQ WSPA I VLLS+ SLL +PNPD P + A ++YK D Y + +K Sbjct: 1 MVSSFLLAEYKNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESYPMEVKKTVKK 157
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22 Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 2 Query: 50 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 493 S +++ +EL++++ PP D+ QA I GP+ +P+A GVF V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A Sbjct: 12 SPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2S_DROER (Ubiquitin-conjugating enzyme E2 S OS=Drosophila erecta GN=GG18165 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22 Identity = 55/148 (37.16%), Postives = 80/148 (54.05%), Query Frame = 2 Query: 50 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 493 S +++ +EL++++ PP D+ QA I GP+ +P+A GVF V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A Sbjct: 12 SPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22 Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 65 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRA 451 KR+ +EL L SA P +D++F W TI G + + + + +S+ FP YP+ P V F T +HPN+++ G+ICLDILKE+WS + +LLSI SLL +PN D PL A ++K A Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of CX295767 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22 Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 2 Query: 56 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 493 MAS +E+ D+ K + V DD+ + T GP+DS + GGV+ + + P YP+K P V F K++HPN++ S+G++CLD++ + WSP + V S + LL PNP DP E A + DRA YE + + +KYA Sbjct: 1 MASPSKRREM-DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYA 147 The following BLAST results are available for this feature:
BLAST of CX295767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295767 ID=CX295767; Name=CX295767; organism=Citrus clementina; type=EST; length=692bpback to top |