CX295770

Overview
NameCX295770
Unique NameCX295770
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.154e-39
Identity = 83/211 (39.34%), Postives = 118/211 (55.92%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 676
            P   DWR+   V  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+   +    Y+ GI      + L+H V  VGYG EN   YW  KN+WG+ WGE G+ R+++N+       CG+  E
Sbjct:  113 PLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCD-FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIV--NYKQGIIKYCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNI-----NACGMRNE 315          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.154e-39
Identity = 95/216 (43.98%), Postives = 122/216 (56.48%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESG------IFTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGI 667
            +P + DWR+KGAV EVK+QG CGSCWAFST   VE      TG L+SLSEQ+LVDCD   ++GCNGGL   A+E II  GG+  ED+YPY A +  C   + +   V I+   ++  ++ +       N  +SV +    +  Q Y+ G      IF  +    LDH V  VGYG +E    +WIVKNSWG  WGE GY RM R       G CGI
Sbjct:  105 IPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCH-LKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGM--NALLLQFYQHGISHPWWIFCSK--YLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMYRG-----DGSCGI 309          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.154e-39
Identity = 91/228 (39.91%), Postives = 131/228 (57.46%), Query Frame = 2
Query:   26 RVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF-TGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            +V   LP+  DWRK+G V  V++QG CGSCWAF+ + A+EG     TG+L  LS Q L+DC  S  N GC  G    AF +++ N G++ E  YPY+  DG C  + +NA    I  + ++P N E  L  AVA+  PVS AI+    +F+ Y  G++    C +  ++H V  VGYG E    +G +YW++KNSWG  WG  G+++    +A      CGIA +AS+
Sbjct:  109 QVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKDGPCRYHSENAS-ANITGFVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSYVVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMK----IAKDRNNHCGIASQASF 330          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.119e-39
Identity = 83/211 (39.34%), Postives = 118/211 (55.92%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 676
            P   DWR+   V  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+   +    Y+ GI      + L+H V  VGYG EN   YW  KN+WG+ WGE G+ R+++N+       CG+  E
Sbjct:  113 PLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCD-FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIV--NYKQGIIKYCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNI-----NACGMRNE 315          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.026e-39
Identity = 90/215 (41.86%), Postives = 126/215 (58.60%), Query Frame = 2
Query:   41 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQK-AVANQPVSVAIEGGGMAFQLYESGIFTGRC--GTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 676
            LP+++DWR K  V  VK+Q  CGSCWAFSTIA +E +  I     ++LSEQ LV+CD + N GC GGLM +A E I+  GG+ + ++ PY   DG C   +K+   ++I       L +E  L++  V N P+SVAI+   +    Y++GI    C     L+H V  VGYG +N   YWI+KNSWG+ WGE GY R++R+        CG+  E
Sbjct:  124 LPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD-NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFDGVC---KKSPFELSISGSRRYVLQNENKLRELLVVNGPISVAIDVSDLI--NYKAGI-ADICENNEGLNHAVLLVGYGVKNDVPYWILKNSWGAEWGEEGYFRVQRD-----KNSCGMMNE 326          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.198e-38
Identity = 84/211 (39.81%), Postives = 117/211 (55.45%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 676
            P   DWR+   +  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+++DCD S + GC GGL+  AFE II  GG+  E+DYPY++ +  C        V        + + +EK         P+ VAI+   +    YE GI        L+H V  VGYG EN   YWI+KNSWG+ WGE G+ ++++NV       CGI  E
Sbjct:  113 PLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD-SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILN--YEQGIIKYCANNGLNHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNV-----NACGIKNE 315          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.198e-38
Identity = 83/211 (39.34%), Postives = 120/211 (56.87%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 676
            P   DWR+   V  VK+QG+CG+CWAF+T+ ++E    I    LI+LSEQ+L+DCD   + GC+GGL+  A+E +++ GGI  E+DYPY+A +G C        V     Y  V + +EK         P+ VAI+   +    Y+ G+        L+H V  VGY  ENG  +WI+KN+WG+ WGE GY R+++N+       CGI  E
Sbjct:  114 PLEFDWRRLNKVTSVKNQGTCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCD-FVDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIV--NYKRGVIRYCANHGLNHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNI-----NACGIQNE 316          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.565e-38
Identity = 82/211 (38.86%), Postives = 117/211 (55.45%), Query Frame = 2
Query:   44 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 676
            P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+   +    Y+ GI      + L+H V  VGYG EN   YW  KN+WG+ WGE G+ R+++N+       CG+  E
Sbjct:  113 PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD-FVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIV--NYKQGIIKYCFDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNI-----NACGMRNE 315          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.014e-37
Identity = 95/214 (44.39%), Postives = 124/214 (57.94%), Query Frame = 2
Query:   53 VDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 685
            VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++ DNG  + + DYPY A DG+C T  K      +  + D+   DE  L +A+  + VSVA++     +Q Y SG+ + +C  +L+HGV  VG   +     W ++NSWGSSWGE G+IR+    AG  T  CGI    S+
Sbjct:  113 VDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADNGLAEAK-DYPYTAKDGTCKTSVKR-PYTHVQGFTDIDSCDE--LAQAIQERTVSVAVDAN--PWQFYRSGVLS-KCTKNLNHGVVLVGVQADGA---WKIRNSWGSSWGEAGHIRL----AGGDT--CGICAAPSF 310          
BLAST of CX295770 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.325e-37
Identity = 84/219 (38.36%), Postives = 116/219 (52.97%), Query Frame = 2
Query:   20 LPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEDDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAME 676
            L R  +  P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I    LI+LSEQ+ +DCD   N GC+GGL+  AFE  ++ GG+  E DYPY+  +G C        V        + + +EK      A  P+ VAI+   +    Y  GI        L+H V  VGY  EN   YWI+KN+WG+ WGE GY R+++N+       CGI  E
Sbjct:  106 LDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR-VNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQCRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVN--YRRGIMRQCANHGLNHAVLLVGYAVENNIPYWILKNTWGTDWGEDGYFRVQQNI-----NACGIRNE 316          
The following BLAST results are available for this feature:
BLAST of CX295770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 181
Match NameE-valueIdentityDescription
CATV_NPVAC3.154e-3939.34Viral cathepsin OS=Autographa californica nuclear ... [more]
CATL_SCHMA3.154e-3943.98Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATJ_RAT3.154e-3939.91Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATV_NPVRO4.119e-3939.34Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_GVCP7.026e-3941.86Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATV_NPVEP1.198e-3839.81Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATV_NPVCD1.198e-3839.34Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATV_NPVBM1.565e-3838.86Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATL2_PARTE1.014e-3744.39Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATV_NPVOP1.325e-3738.36Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075G01SK DroRLeaf1 Citrus clementina cDNA clone C05075G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295770 ID=CX295770; Name=CX295770; organism=Citrus clementina; type=EST; length=687bp
AAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACT
CTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGA
AGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTAT
AAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGG
TGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTTGATGGAC
TATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACAGAAGATGA
TTACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCGGAAAAATG
CCAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAAATGACGAG
AAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCGATTGA
AGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAA
GATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACA
GAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTG
GGGAGAGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCA
CGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCC
back to top