CX295781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.764e-32 Identity = 62/151 (41.06%), Postives = 101/151 (66.89%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 455 ++GD+GVGKSC++L+F +F P +T+G F ++ I + D +K +IWDTAGQE + ++ YYRG YDIT D+FN W+++ ++H + ++V+ L+GNK+DL +REV ++G +A ++G+ F+ETSAKTA N+ + F Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITI-DGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 160
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.008e-32 Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 455 L+G++GVGK+C+V RF +G F P T+G F+ +T+ + + VK +IWDTAGQER+ ++ YYR YDIT +SF W++E++++ S ++ LVGNK DL E+REV Q E++E M+++ETSAK +DN+ +LF Sbjct: 14 LIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEI-NGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLF 163
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.008e-32 Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 455 L+G++GVGK+C+V RF +G F P T+G F+ +T+ + + VK +IWDTAGQER+ ++ YYR YDIT +SF W++E++++ S ++ LVGNK DL E+REV Q E++E M+++ETSAK +DN+ +LF Sbjct: 14 LIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEI-NGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLF 163
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.008e-32 Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 455 L+G++GVGK+C+V RF +G F P T+G F+ +T+ + + VK +IWDTAGQER+ ++ YYR YDIT +SF W++E++++ S ++ LVGNK DL E+REV Q E++E M+++ETSAK +DN+ +LF Sbjct: 14 LIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEI-NGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLF 163
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: YPT52_YEAST (GTP-binding protein YPT52 OS=Saccharomyces cerevisiae GN=YPT52 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 76/180 (42.22%), Postives = 105/180 (58.33%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDS-------TTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQ-KHGSPDIVMALVGNKADLHEK--------------------REVPAQDGIEYAEKNGMFFIETSAKTADNINQLFE 458 LLGDS VGKS IV RFV+ FD + T+GA+FLSQ+I + + +KFEIWDTAGQERY +LAP+YYR YDIT DS KA+ WV EL+ K G D+V+ L+GNK DL ++ R + ++ +YA++ G+ F E SAKT + + ++F+ Sbjct: 8 LLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQ 187
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.929e-32 Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEVLIT 470 L+GDSGVGKS ++ RF R +F SK T+G F ++++ + D VK +IWDTAGQERY A+ YYRG YD+T +F + W+KEL+ H P+IV+ LVGNK+DL V +G +AE+ ++F+ETSA + N+ F ++T Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQV-DGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLT 173
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEVLI 467 L+GDSGVGKS ++ RF + +F+ SK T+G F ++T+ + D +K +IWDTAGQERY A+ YYRG YDI+ S+ +W+ EL+++ ++ + L+GNK+DL R VP ++ +A++N + F ETSA ++N+++ FE LI Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEI-DGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELI 171
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 71/156 (45.51%), Postives = 97/156 (62.18%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEVLIT 470 L+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D VK +IWDTAGQERY A+ YYRG YDIT +F + W+KEL+ H +IV+ LVGNKADL R V +D +AE+ FF+ETSA + N+ F ++T Sbjct: 19 LIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKI-VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLT 173
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.701e-32 Identity = 69/152 (45.39%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHE-KREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF 455 L+GDSGVGKSC++LRF G F + T+G F +TI L D +K +IWDTAGQER+ + YYRG YD+T SFN + W++ +++H S ++ LVGNKAD+ E KR VP G A++ G+ F ETSAKT N+ ++F Sbjct: 20 LIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVF 170
BLAST of CX295781 vs. ExPASy Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.701e-32 Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = 3 Query: 3 LLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGS-PDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEVLI 467 ++G+SGVGKS ++LRF FDP T+G F +TIA+ D K IWDTAGQER+ L P YYRG YD+T D+F K + W+ EL+ + + D+V LVGNK D + REV +G+++A K+ M FIE SAKT D + FE L+ Sbjct: 13 IIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAI-DGNRAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYCTRNDLVKMLVGNKID-KDNREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELV 166 The following BLAST results are available for this feature:
BLAST of CX295781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295781 ID=CX295781; Name=CX295781; organism=Citrus clementina; type=EST; length=704bpback to top |