CX295787

Overview
NameCX295787
Unique NameCX295787
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH32_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japonica GN=GH3.2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31
Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 2
Query:   65 ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFR 661
            E +E  E +T+  + +Q   L  IL  N  AEYL+  G+ GRTD E+FK+ VP+VT+EDL+P I+RI +GD S I++  PIT    SSGT+ G+ K +P  ++ ++    ++       N   P + KGK L F++   ++KT GGL A    T+ Y+S  FK       +   SP   I   D  QS+Y  +LCGL+ R
Sbjct:   31 EKLEFIEEMTRGFDAVQERVLAAILARNNGAEYLRRHGMEGRTDREAFKARVPVVTYEDLRPEIERIANGDRSNIISSHPITEFLTSSGTSAGERKLMPTIEDELDRRQMLYSLLMPVMNLYVPGLDKGKGLYFLFIKSETKTPGGLPARPVLTSYYKSDHFKHRPFDPYNVYTSPTAAILCTDAFQSMYAQMLCGLVAR 230          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH34_ARATH (Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana GN=GH3.4 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.862e-30
Identity = 78/194 (40.21%), Postives = 109/194 (56.19%), Query Frame = 2
Query:   83 ETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFR 661
            E IT++ + +Q + L +IL  N++ EYL+   LNG  D +SFKS VP+V +EDL+  IQRI +GD SPIL+  PIT    SSGT+ G+ K +P  +E +     +        N   P + KGK L F++   +S T GGL A  A T+ Y+S  F+       S   SP E I   D  QS+Y  +LCGL+ R
Sbjct:   28 EEITRNPDSVQEKVLGEILSRNSNTEYLKRFDLNGAVDRKSFKSKVPVVIYEDLKTDIQRISNGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDINRRQLLGNLLMPVMNLYVPGLDKGKGLYFLFVKSESTTSGGLPARPALTSYYKSDYFRT--SDSDSVYTSPKEAILCCDSSQSMYTQMLCGLLMR 219          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH317_ARATH (Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.293e-30
Identity = 74/213 (34.74%), Postives = 120/213 (56.34%), Query Frame = 2
Query:   32 MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDP--ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFR 661
            M+   +  D +  ++  E +T +AE IQ++ L +IL +N+  +YL+   L+G  D   +SFK+ VP+V ++D++P+IQRI DG+ S I++ +PIT +  SSGT+ GKPK +P   E +E     +       N+    + +GK +  ++   + KT  GL A    T+ Y+S  F+       +   SPD+ I   D  QS+YC LLCGL+ R
Sbjct:    1 MIPSYDPNDTEAGLKLLEDLTTNAEAIQQQVLHQILSQNSGTQYLRAF-LDGEADKNQQSFKNKVPVVNYDDVKPFIQRIADGESSDIVSAQPITELLTSSGTSAGKPKLMPSTAEELERKTFFYSMLVPIMNKYVDGLDEGKGMYLLFIKPEIKTPSGLMARPVLTSYYKSQHFRNRPFNKYNVYTSPDQTILCQDSKQSMYCQLLCGLVQR 212          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH311_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.11 OS=Oryza sativa subsp. japonica GN=GH3.11 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.293e-30
Identity = 72/199 (36.18%), Postives = 114/199 (57.29%), Query Frame = 2
Query:   71 IEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFRE 664
            +EE E +T +A+  Q   L KILE N + EYL    +NG T+  +FK  VP+VT++ + PYI RI  G+ S IL G+ I  + RSSGT++G+P+ +P   + ++    ++       N+    +G+GKA+  ++   ++ T  G+   +  T+ Y+S  F      + +   SPDEVI  PD  QS+YC LLCGL+ R+
Sbjct:   14 LEELEMLTVNAKEAQELILTKILERNQATEYLSKF-MNGSTNISAFKRHVPVVTYDKVHPYILRIATGEESSILCGEYILELLRSSGTSRGEPRLMPSILKDLDRRTYLYSLIMPIMNKYISGLGEGKAMYLLFVKAETLTDSGIPVRSVLTSYYKSPHFLHRKHDLYNNYTSPDEVILCPDSQQSMYCQLLCGLVERQ 211          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH38_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. japonica GN=GH3.8 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29
Identity = 72/200 (36.00%), Postives = 109/200 (54.50%), Query Frame = 2
Query:   65 ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFR 661
            E +   + +T + + +Q   L +IL  NA  EYL   GL+G TD  +F++ VP+V+++DLQPYIQRI +GD SPIL+  P++    SSGT+ G+ K +P   + ++    ++       N   P + KGK L F++   ++KT GGL A    T+ Y+S  FK           SP   I   D  QS+Y  ++CGL  R
Sbjct:   28 EKLRFIDEMTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSYDDLQPYIQRIANGDRSPILSTHPVSEFLTSSGTSAGERKLMPTIMDELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETKTPGGLTARPVLTSYYKSDHFKNRPYDPYHNYTSPTAAILCADAFQSMYAQMVCGLCQR 227          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH38_ORYSI (Probable indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica GN=GH3.8 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29
Identity = 72/200 (36.00%), Postives = 109/200 (54.50%), Query Frame = 2
Query:   65 ELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFR 661
            E +   + +T + + +Q   L +IL  NA  EYL   GL+G TD  +F++ VP+V+++DLQPYIQRI +GD SPIL+  P++    SSGT+ G+ K +P   + ++    ++       N   P + KGK L F++   ++KT GGL A    T+ Y+S  FK           SP   I   D  QS+Y  ++CGL  R
Sbjct:   28 EKLRFIDEMTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRAKVPVVSYDDLQPYIQRIANGDRSPILSTHPVSEFLTSSGTSAGERKLMPTIMDELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETKTPGGLTARPVLTSYYKSDHFKNRPYDPYHNYTSPTAAILCADAFQSMYAQMVCGLCQR 227          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH39_ARATH (Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana GN=GH3.9 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.550e-28
Identity = 73/206 (35.44%), Postives = 109/206 (52.91%), Query Frame = 2
Query:   53 VDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGRTDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFRER 667
            +D D +++E E IT  A  +Q   LR ILE N   EYL    +NG  D   FK  VP++ ++D+ PYIQRI +G+ S ++TG  IT I  SSGT+ G+PK +P   E ++    ++       N+    + KGKA+   +   ++ T  GL      T+ Y+S  F+       +   SP + I   D +QS+YC LL GLI R +
Sbjct:    6 LDHDSVLKELERITSKAAEVQDNILRGILERNKDTEYLSKY-MNGSKDVLEFKRAVPIIIYKDIYPYIQRIANGEDSSLITGHSITEILCSSGTSAGEPKLMPTIPEDLDRRTFLYNLIIPIVNKYITGLDKGKAMYLNFVKAETSTPCGLPIRAVLTSYYKSKHFQCRPYDPFNDLTSPIQTILCEDSNQSMYCQLLAGLIHRHK 210          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH310_ORYSJ (Putative indole-3-acetic acid-amido synthetase GH3.10 OS=Oryza sativa subsp. japonica GN=GH3.10 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27
Identity = 81/221 (36.65%), Postives = 116/221 (52.49%), Query Frame = 2
Query:    5 SHSLRLQLKMLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNLGLNGR-TDPESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFR 661
            S SL   L    K   V+   LIEE   +T + + +Q   L +IL  NA AEYL   GL+   TD  +F++ VP+ +++DL+PY++RI +GD SPIL+  PI     SSGT+ G+ K +P   + M     +   + +  N   P +  GK L F++   ++KT GGL A  A T+VY+S  FK           SP   I   D  QS+Y  +LCGL  R
Sbjct:   13 SRSLSSSLMAAAKEPDVENLRLIEE---LTSNVDAVQERVLAEILGRNADAEYLDKCGLDASDTDRATFRAKVPVASYDDLKPYVKRIANGDRSPILSTHPIIEFFTSSGTSAGERKLMPIVTDEMARREVLSSLATSVLNVYVPGLHTGKGLYFLFARSETKTPGGLTAQPALTSVYKSEHFKRAY-----AYTSPMAAILCEDASQSMYAQMLCGLCQR 225          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH313_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.13 OS=Oryza sativa subsp. japonica GN=GH3.13 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24
Identity = 66/219 (30.14%), Postives = 111/219 (50.68%), Query Frame = 2
Query:   32 MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQN------LGLNGRTDP--ESFKSCVPLVTHEDLQPYIQRIIDGDISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFR 661
            M+   +  D    +E  E +T  A  +QR  L ++L  N   +YL+       +   G  D    +FK  VP+V +ED++PYI+RI +G  S +++ KPIT +  SSGT+ G+PK +P  +E ++    ++       N+    + +G+ +  ++   +  T  G+ A    T+ Y+S  F+    +  ++  SPD  I  PD  QS+Y  LLCGL  R
Sbjct:   34 MIPACDPHDGPACLELIEVLTTRAAAVQRRVLAEVLAMNTGTDYLRRFLGDEVVAAAGGEDELAAAFKERVPVVEYEDVKPYIERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPATEEELDRKTFLYNLLVPVMNKYVEGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRHFRRRPDSPYTRYTSPDAAILCPDSRQSMYAQLLCGLARR 252          
BLAST of CX295787 vs. ExPASy Swiss-Prot
Match: GH37_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.7 OS=Oryza sativa subsp. japonica GN=GH3.7 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23
Identity = 75/226 (33.19%), Postives = 109/226 (48.23%), Query Frame = 2
Query:   32 MLEKMETVDVDELIEEFETITKDAERIQRETLRKILEENASAEYLQNL--GLNGRTDP--ESFKSCVPLVTHEDLQPYIQRIIDGD--ISPILTGKPITTISRSSGTTQGKPKFLPFNDELMETTLQIFRTSYAFRNREFPI--------GKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQSLYCHLLCGLIFRER 667
            +L + +  DV    +    +T DA  IQR  LR+IL  N+  EYL+    G  G  D   ++FK  VP+  +ED++PY+ R+  G    S +L   PIT +SRSSGT+ G+ K LP   E ++  +  +      RN             G G+ +  ++     +T  GL   +A T  Y S  F+        +C SP E I  P   QS+YC LLCGL+ R R
Sbjct:    4 LLPEFDPADVRAGRDLIHRLTADAAGIQRGVLREILSRNSGTEYLRRFLGGAAGDDDDVRDAFKRRVPVSGYEDVKPYVDRVASGGEPSSALLCSDPITCLSRSSGTSGGQQKLLPSTAEELDRKVFFYAVQALVRNMSLHTDHGEDDDGGGGEGMYLMFAFHGDRTLSGLPIQSALTTYYHSRQFQECDIGGFDKCTSPLEAILCPYGEQSMYCQLLCGLLHRCR 229          
The following BLAST results are available for this feature:
BLAST of CX295787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
GH32_ORYSJ3.367e-3138.00Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH34_ARATH4.862e-3040.21Indole-3-acetic acid-amido synthetase GH3.4 OS=Ara... [more]
GH317_ARATH8.293e-3034.74Indole-3-acetic acid-amido synthetase GH3.17 OS=Ar... [more]
GH311_ORYSJ8.293e-3036.18Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH38_ORYSJ1.847e-2936.00Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH38_ORYSI1.847e-2936.00Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH39_ARATH4.550e-2835.44Putative indole-3-acetic acid-amido synthetase GH3... [more]
GH310_ORYSJ1.729e-2736.65Putative indole-3-acetic acid-amido synthetase GH3... [more]
GH313_ORYSJ8.880e-2430.14Probable indole-3-acetic acid-amido synthetase GH3... [more]
GH37_ORYSJ1.515e-2333.19Probable indole-3-acetic acid-amido synthetase GH3... [more]

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Properties
Property NameValue
Genbank descriptionC05075H06SK DroRLeaf1 Citrus clementina cDNA clone C05075H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295787 ID=CX295787; Name=CX295787; organism=Citrus clementina; type=EST; length=712bp
TTTCTCTCACTCTCTGCGACTGCAGCTGAAAATGTTAGAAAAGATGGAGA
CAGTGGATGTAGACGAATTGATAGAGGAATTCGAAACGATCACAAAGGAC
GCGGAGAGAATTCAAAGAGAGACTCTGAGGAAGATTTTGGAAGAAAACGC
ATCGGCTGAGTACTTGCAAAATCTCGGCCTCAATGGACGAACCGATCCCG
AAAGTTTCAAGTCTTGTGTTCCACTTGTCACTCATGAGGACTTGCAGCCT
TATATTCAGAGAATTATAGATGGTGATATTTCACCAATCCTCACTGGCAA
GCCCATTACGACTATATCACGGAGTTCTGGGACGACTCAAGGAAAGCCCA
AATTTCTACCCTTTAATGATGAATTGATGGAAACCACCCTGCAGATTTTT
CGAACTTCCTACGCCTTTAGAAACAGAGAATTCCCAATTGGGAAAGGAAA
GGCCTTACAGTTTATATACGGCAGCAAGCAATCTAAAACTAAGGGGGGTC
TGAATGCTGGAACTGCTACTACAAATGTCTATCGCAGTTCAACATTTAAA
GCAGAAATGAAGGCGATGCAGTCACAATGTTGTAGCCCTGATGAAGTAAT
CTTTGGTCCTGATTTCCACCAATCATTATACTGCCATCTCCTATGTGGGC
TGATCTTCAGGGAAAGAGATTCACTTGTATTCTCACCTTTGCCATAGTCT
TGTCATGCTTTC
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