CX295792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.727e-30 Identity = 56/123 (45.53%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 VA+TP +A IV + F ++WN+F+GF++ R IP+WWRWYYW PVAW LYGLV Q G+ + ++ TVK F+ F+ DF+PVV +M +V+ +F +FA++IK +NFQRR Sbjct: 1324 VAMTPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAWTLYGLVVSQFGEYTDTM-----SDVDETVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.727e-30 Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V+LTP QQVA+I S F ++NLFSGF + R IP WW WYYW+ PVAW +YGL+T Q GD+E+ + + G +TVKQ+I+D Y F+ D++ V+ + + + F F+FA+ IK +NFQ R Sbjct: 1321 VSLTPNQQVASIFASAFYGIFNLFSGFFIPRPKIPKWWVWYYWICPVAWTIYGLITSQYGDVETPIALL-GGAPGLTVKQYIKDQYGFESDYMGPVAGVLVGFTVFFAFIFAFCIKTLNFQSR 1442
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.416e-29 Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 4 ALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 A+TP VA I+ + F ++WNLF GF++ R IP WWRWYYW +PV+W LYGL+T Q GDL+ + + DG T T F+ D++ F+ DF+ VV+ M + +F VFA AIK +NFQRR Sbjct: 1330 AITPNHTVAPIIAAPFYTLWNLFCGFMIPRKRIPAWWRWYYWANPVSWTLYGLLTSQFGDLDQPLLLADGITT-TTAVDFLRDHFGFRHDFLGVVAGMVAGFCVLFAVVFALAIKYLNFQRR 1450
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.120e-29 Identity = 57/123 (46.34%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V LTP VA+IV S F +WNLFSGF++ R +P+WWRWY W+ PVAW LYGLV Q GD+ + + DG VK F+E+ +DFK ++ VV+++ + + +F F+F +AI +NFQ+R Sbjct: 1348 VGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDI--MTPMDDGT----PVKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.045e-28 Identity = 54/123 (43.90%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 VALTP QQVA + F ++NLFSGF++ R IP WW WYYW+ PVAW +YGL+ Q GD+E +++P G T+K +IE++Y + DF+ ++ + + + F F+FA+ I+ +NFQ+R Sbjct: 1295 VALTPNQQVAAVFAGAFYGLFNLFSGFVIPRPRIPKWWIWYYWICPVAWTVYGLIVSQYGDVEDTIKVP-GMANDPTIKWYIENHYGYDADFMIPIATVLVGFTLFFAFMFAFGIRTLNFQQR 1416
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.731e-27 Identity = 51/123 (41.46%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 VA++P +VA I + F S++NLFSGF + R IP WW WYYWL P+AW +YGL+ Q GDLE ++ +P +N T+ ++ ++ + + F+PVV+ + +++ F F++A IK +NFQ R Sbjct: 1380 VAISPNHEVAAIFAAAFYSLFNLFSGFFIPRPRIPKWWIWYYWLCPLAWTVYGLIVTQYGDLEQIISVPGQSN--QTISYYVTHHFGYHRKFMPVVAPVLVLFAVFFAFMYAICIKKLNFQHR 1500
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.261e-27 Identity = 54/123 (43.90%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V LTP VA+IV S F ++WNLF+GF+++R PVWWRWY W+ PVAW LYGL+ Q GD+ + + DG + V F+E+ +DFK ++ V+++ + + +F F+F +AI +NFQ+R Sbjct: 1352 VGLTPSYHVASIVSSAFYAIWNLFTGFVISRPATPVWWRWYCWICPVAWTLYGLIVSQYGDI--VTPMDDG----IPVNVFVENYFDFKHSWLGFVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1468
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.578e-27 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 VA+TP +A IV + F +WN+F+GFL+ R IP+WWRWY W PVAW LYGLV Q GD+ + + DG V+ +I + F+ D++ V+ + + A+F FVFA++IK NFQRR Sbjct: 1327 VAMTPNSDIAAIVSTAFYCIWNIFAGFLIPRPRIPIWWRWYSWACPVAWTLYGLVASQYGDITNST-LEDGE----VVQDYIRRYFGFRHDYLGYVATAVVGFAALFAFVFAFSIKVFNFQRR 1444
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.914e-26 Identity = 52/123 (42.28%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V+++P QVA+I+ + F +++NLFSGF + R IP WW WYYWL PVAW +YGL+ Q GD+E + +P + V+ FI+D + + DF+ VV+ + + F F +AY+I+ +NFQ+R Sbjct: 1389 VSVSPNLQVASILGAAFYTLFNLFSGFFIPRPKIPKWWVWYYWLCPVAWTVYGLIVSQYGDVEDFITVP--GQSDQQVRPFIKDYFGYDPDFMGVVAAVLAGFTVFFAFTYAYSIRTLNFQQR 1509
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.273e-26 Identity = 55/123 (44.72%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V LTP Q +A ++ S F S+WNL SGFLV + IPVWW W+Y++ PVAW L G++ Q+GD+ES++ P + TVK+FIE + +K + I V + + + + A+F FA ++K +NFQRR Sbjct: 1307 VGLTPNQHLAAVISSAFYSLWNLLSGFLVQKPLIPVWWIWFYYICPVAWTLQGVILSQLGDVESMINEPLFHG---TVKEFIEYYFGYKPNMIGVSAAVLVGFCALFFSAFALSVKYLNFQRR 1426 The following BLAST results are available for this feature:
BLAST of CX295792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295792 ID=CX295792; Name=CX295792; organism=Citrus clementina; type=EST; length=543bpback to top |