CX295792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V LTP +A+IV S F ++WNLFSGF++ R +P+WWRWY W PVAW LYGLV Q GD+E+ +E DG VK F+E+ + FK ++ V+ + + +F +F +AI NFQ+R Sbjct: 1341 VGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME--DGT----PVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.499e-26 Identity = 55/123 (44.72%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V LTP +A+IV S F ++WNLFSGF++ R +P+WWRWY W PVAW LYGLV Q GD+E+ +E DG VK F+E+ + FK ++ V+ + + +F +F +AI NFQ+R Sbjct: 1341 VGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME--DGT----PVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23 Identity = 51/124 (41.13%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIP--DGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQR 366 V LTP Q +A++V S F S+WNL SGFL+ +S IP WW W+Y++ PVAW L G++T Q+GD+++ + P DG TV +F++ N F++ + + + F ++A +IK INFQR Sbjct: 1322 VGLTPTQHMASVVSSAFYSLWNLLSGFLIPQSRIPGWWIWFYYICPVAWTLRGVITSQLGDVDTRIVGPGFDG-----TVHEFLQQNLGFEQGMTGATVAVLVAFSVFFFSIYAISIKMINFQR 1440
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.190e-22 Identity = 49/123 (39.84%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V++TP VA I+ S F +++NLF+GFL+ ++ IP WW W+Y+L+P +W L G++T Q GD+E + + K TV F+ D + F + +P+V+ + I + VF +FA+ I +NFQRR Sbjct: 1328 VSMTPSFPVAAILQSSFYTMFNLFAGFLMPKAQIPKWWIWFYYLTPTSWTLNGMLTSQYGDIEKEITV---FQEKKTVAAFLGDYFGFHHNQLPIVAFVLIAYPLVFASLFAFFIGKLNFQRR 1447
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20 Identity = 43/123 (34.96%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 ++++P Q++A+I+ + WN+FSGF + R + VW RW+ ++ P W LYGL Q GD+E+ ++ T TV +F+++ Y ++ +F+ VVS+ I + F+F++A+++K +NFQ+R Sbjct: 1302 ISVSPNQEIASILNGVISTSWNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLYGLTIAQYGDVETRLD------TGETVVEFMKNYYGYEYNFLWVVSLTLIAFSMFFVFIYAFSVKILNFQKR 1418
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20 Identity = 45/123 (36.59%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V++TP VA I+ S F +NLFSGFL+ ++ +P WW W Y+L+P +W L G ++ Q GD+ + + G +T TV +F++D + F D + V +++ I + +FA+ + +NFQRR Sbjct: 1331 VSITPNFMVAAILQSLFYVGFNLFSGFLIPQTQVPGWWIWLYYLTPTSWTLNGFISSQYGDIHEEINV-FGQST--TVARFLKDYFGFHHDLLAVTAVVQIAFPIALASMFAFFVGKLNFQRR 1450
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.735e-19 Identity = 46/123 (37.40%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 VALTP +A + S F S+ NLF+GF++ + IP WW W Y+LSP +W L GL++ Q GD+E + + K +V F+ED + +K D + VV+ + I + + +FA+ + +NFQ++ Sbjct: 1278 VALTPNIHMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVEKEITV---FGEKKSVSAFLEDYFGYKHDSLAVVAFVLIAFPIIVASLFAFFMSKLNFQKK 1397
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18 Identity = 43/123 (34.96%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 VALTP +A + S F S+ NLF+GF++ + IP WW W Y+LSP +W L GL++ Q GD++ + + K V F+ED + +K + + VV+ + I + + +FA+ + ++FQ++ Sbjct: 1281 VALTPNIHMAVTLRSSFFSMLNLFAGFVIPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVDKEILV---FGEKKRVSAFLEDYFGYKHESLAVVAFVLIAYPIIVATLFAFFMSKLSFQKK 1400
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.290e-18 Identity = 43/123 (34.96%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V +TP +A + S F ++ NLF+G+++ + +IP WW W Y+LSP +W L GL+T Q GD+E + + G K V F+ED + ++ D + +V+++ I + + +FA+ I +NFQ++ Sbjct: 1273 VVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEI-LAFGEKKK--VSDFLEDYFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNFQKK 1392
BLAST of CX295792 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.521e-18 Identity = 43/123 (34.96%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 VALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 369 V +TP +A + S F ++ NLF+G+++ + +IP WW W Y+LSP +W L GL+T Q GD+E + + G K V F+ED + ++ D + +V+++ I + + +FA+ I +NFQ++ Sbjct: 1271 VVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEI-LAFGEKKK--VSAFLEDYFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNFQKK 1390 The following BLAST results are available for this feature:
BLAST of CX295792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295792 ID=CX295792; Name=CX295792; organism=Citrus clementina; type=EST; length=543bpback to top |