CX295793
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_CHLP8 (Delta-aminolevulinic acid dehydratase OS=Chlorobaculum parvum (strain NCIB 8327) GN=hemB PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 69/158 (43.67%), Postives = 99/158 (62.66%), Query Frame = 1 Query: 211 RKSPAMRASFQETNLSPANFVYPLFIHEGEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 R++ A+R QE L+ + V+PLF+ G + +MPG +R V+E + D+G+ + LF +P+ K+ G EAYNDNG++ + I +K P+L I TDVALDP++ GHDG+V+ DG+I+NDETV L K AVS A AGAD VSP+ Sbjct: 17 RRTAALRNLVQENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRA-VEECKELYDLGIQGIDLFG-IPEQ-KTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVK-DGIILNDETVEVLQKMAVSHAEAGADFVSPS 170
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_BACSU (Delta-aminolevulinic acid dehydratase OS=Bacillus subtilis GN=hemB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 63/158 (39.87%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 211 RKSPAMRASFQETNLSPANFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 R S AMR +ET L P++F+YP+F+ EG E + +MP + + L EVA+ +G+ SV++F +P+ K G +AY+D+G+V + I +K+ +P++V+ D L Y+ GH G+V+ DGVI+NDE++ L + AVSQA+AGAD+++P+ Sbjct: 12 RTSKAMREMVKETRLHPSDFIYPIFVVEGLEGKKAVPSMPDVHHVSLDL-LKDEVAELVKLGIQSVIVFG-IPEE-KDDCGTQAYHDHGIVQKAITEIKEHFPEMVVVADTCLCEYTDHGHCGLVK-DGVILNDESLELLAQTAVSQAKAGADIIAPS 165
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_BRAJA (Delta-aminolevulinic acid dehydratase OS=Bradyrhizobium japonicum GN=hemB PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24 Identity = 60/159 (37.74%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 208 NRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 NRK+ R +E L+ + ++PLF+ +G I +MPG RL V+E +A + + + LFP +L+ G EA N N LV + + +K +P++ + DVALDP++S GHDG++ DG I+NDETV L +QA+ QA AG D+++P+ Sbjct: 35 NRKAEWARRMVRENVLTTDDLIWPLFLIDGNNKREQIASMPGVERLSVDQA-VREAERAMKLTIPCIALFPYTDPSLRDEEGSEACNPNNLVCQAVRAIKKEFPEIGVLCDVALDPFTSHGHDGLI-ADGAILNDETVAVLVRQALVQAEAGCDIIAPS 191
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_RHOCA (Delta-aminolevulinic acid dehydratase OS=Rhodobacter capsulatus GN=hemB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 59/158 (37.34%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 211 RKSPAMRASFQETNLSPANFVYPLFIHEGE-EDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 R++ A+R QE LS + ++P+FI + D I +MPG R G ++ +RD G + + P A+K+ T + A+ + R I +K P++ I TD+ALDPY+++GHDG+VR DG+++NDET L K A++QA AGAD++ P+ Sbjct: 17 RRTEALRDLAQENRLSVKDLIWPIFITDVPGADVEISSMPGVVRRTM-DGALKAAEGSRDAGHSRDLPVPLTDPAVKTETCEMAWQPDNFTNRVIAAMKQAVPEVAIMTDIALDPYNANGHDGLVR-DGILLNDETTEALVKMALAQAAAGADILGPS 172
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_PSEAE (Delta-aminolevulinic acid dehydratase OS=Pseudomonas aeruginosa GN=hemB PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 60/159 (37.74%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 208 NRKSPAMRASFQETNLSPANFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 NR+ R +E L+ + + P+F+ +G + I +MPG RL L+ E + +G+ ++ LFP P KS EAYN G+ R L++R+P+L I TDVALDP+++ G DGI+ +DG ++ND ++ L +QA+S A AGA VV+P+ Sbjct: 18 NRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLI-EAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPS 175
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_METTH (Delta-aminolevulinic acid dehydratase OS=Methanobacterium thermoautotrophicum GN=hemB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 70/162 (43.21%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 211 RKSPAMRASFQETNLSPANFVYPLFIHE--GEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 RKSP +R +ET L P++ +YP+F+ E G D I MPG +R V E ++ D G++SV++F P D L S A++ +G+V RT+ LK+ DLV+ TDV L Y+S GH GIV DG I+NDET+ L + A+S A AGADVV+P+ Sbjct: 16 RKSPQIRNILRETRLHPSDLIYPMFVSEKLGRGDVEAIDTMPGQFRYSVDDA-VSEASRLEDEGLSSVLIFGMPSAKDELASA----AHDPHGVVQRTVRRLKEE-TDLVVMTDVCLCQYTSHGHCGIV-VDGEIVNDETLEVLSRIALSHAEAGADVVAPS 170
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_ARCFU (Delta-aminolevulinic acid dehydratase OS=Archaeoglobus fulgidus GN=hemB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22 Identity = 60/153 (39.22%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 226 MRASFQETNLSPANFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 +R F+E LSP N + P+F+ E +E PI +MP +R+ + +EV + + + S +LF +P + K TG AY+ NG++ + + +K +PD VI TDV L Y++ GH G+V+ DG I+NDET+ + K AVS A +GAD+V+P+ Sbjct: 17 LRWMFREARLSPENLITPIFVDENIKEKKPIESMPDYFRIPLEM-VDKEVEECLEKDLRSFILFG-IP-SYKDETGSSAYDQNGVIQKAVRRIKAEFPDAVIVTDVCLCEYTTHGHCGVVK-DGEIVNDETLPIIGKTAVSHAESGADIVAPS 165
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_SHIFL (Delta-aminolevulinic acid dehydratase OS=Shigella flexneri GN=hemB PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21 Identity = 61/158 (38.61%), Postives = 93/158 (58.86%), Query Frame = 1 Query: 211 RKSPAMRASFQETNLSPANFVYPLFIHEGEED-TPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 RKSPA+RA F+ET LS + V P+F+ E +D + AMPG R+ +H L +E+ + + G+ SV+ F TG +A+ ++GLV R + K P++++ +D Y+S GH G++ E GV ND T+ L KQAV A AGAD ++P+ Sbjct: 12 RKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH-LAREIERIANAGIRSVMTFGISHHT--DETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGV-DNDATLENLGKQAVVAAAAGADFIAPS 165
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_ECOLI (Delta-aminolevulinic acid dehydratase OS=Escherichia coli (strain K12) GN=hemB PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21 Identity = 61/158 (38.61%), Postives = 93/158 (58.86%), Query Frame = 1 Query: 211 RKSPAMRASFQETNLSPANFVYPLFIHEGEED-TPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 RKSPA+RA F+ET LS + V P+F+ E +D + AMPG R+ +H L +E+ + + G+ SV+ F TG +A+ ++GLV R + K P++++ +D Y+S GH G++ E GV ND T+ L KQAV A AGAD ++P+ Sbjct: 12 RKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH-LAREIERIANAGIRSVMTFGISHHT--DETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGV-DNDATLENLGKQAVVAAAAGADFIAPS 165
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_CHLPN (Delta-aminolevulinic acid dehydratase OS=Chlamydia pneumoniae GN=hemB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 58/160 (36.25%), Postives = 94/160 (58.75%), Query Frame = 1 Query: 208 NRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLV-QEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681 NRK+ A+R ET+LSP + + P F+ G I ++PG +R W L+ +E+ + G+ +V+LFP +PD LK G + N ++ +I +K+ +P L + +D+ALDPY++ GHDGI +G ++NDE+V A A GAD+V+P+ Sbjct: 13 NRKTAAIRDLLAETHLSPKDLIAPFFVKYGNNIKEEIPSLPGVFR--WSLDLLLKEIERLCTYGLRAVMLFPIIPDDLKDAYGSYSSNPKNILCHSIHEIKNAFPHLCLISDIALDPYTTHGHDGIFL-NGEVLNDESVRIFGNIATLHAEMGADIVAPS 169 The following BLAST results are available for this feature:
BLAST of CX295793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295793 ID=CX295793; Name=CX295793; organism=Citrus clementina; type=EST; length=696bpback to top |