CX295793

Overview
NameCX295793
Unique NameCX295793
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_CHLP8 (Delta-aminolevulinic acid dehydratase OS=Chlorobaculum parvum (strain NCIB 8327) GN=hemB PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26
Identity = 69/158 (43.67%), Postives = 99/158 (62.66%), Query Frame = 1
Query:  211 RKSPAMRASFQETNLSPANFVYPLFIHEGEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            R++ A+R   QE  L+  + V+PLF+  G      + +MPG +R       V+E  +  D+G+  + LF  +P+  K+  G EAYNDNG++ + I  +K   P+L I TDVALDP++  GHDG+V+ DG+I+NDETV  L K AVS A AGAD VSP+
Sbjct:   17 RRTAALRNLVQENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRA-VEECKELYDLGIQGIDLFG-IPEQ-KTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVK-DGIILNDETVEVLQKMAVSHAEAGADFVSPS 170          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_BACSU (Delta-aminolevulinic acid dehydratase OS=Bacillus subtilis GN=hemB PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25
Identity = 63/158 (39.87%), Postives = 103/158 (65.19%), Query Frame = 1
Query:  211 RKSPAMRASFQETNLSPANFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            R S AMR   +ET L P++F+YP+F+ EG E    + +MP  + +     L  EVA+   +G+ SV++F  +P+  K   G +AY+D+G+V + I  +K+ +P++V+  D  L  Y+  GH G+V+ DGVI+NDE++  L + AVSQA+AGAD+++P+
Sbjct:   12 RTSKAMREMVKETRLHPSDFIYPIFVVEGLEGKKAVPSMPDVHHVSLDL-LKDEVAELVKLGIQSVIVFG-IPEE-KDDCGTQAYHDHGIVQKAITEIKEHFPEMVVVADTCLCEYTDHGHCGLVK-DGVILNDESLELLAQTAVSQAKAGADIIAPS 165          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_BRAJA (Delta-aminolevulinic acid dehydratase OS=Bradyrhizobium japonicum GN=hemB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24
Identity = 60/159 (37.74%), Postives = 94/159 (59.12%), Query Frame = 1
Query:  208 NRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            NRK+   R   +E  L+  + ++PLF+ +G      I +MPG  RL      V+E  +A  + +  + LFP    +L+   G EA N N LV + +  +K  +P++ +  DVALDP++S GHDG++  DG I+NDETV  L +QA+ QA AG D+++P+
Sbjct:   35 NRKAEWARRMVRENVLTTDDLIWPLFLIDGNNKREQIASMPGVERLSVDQA-VREAERAMKLTIPCIALFPYTDPSLRDEEGSEACNPNNLVCQAVRAIKKEFPEIGVLCDVALDPFTSHGHDGLI-ADGAILNDETVAVLVRQALVQAEAGCDIIAPS 191          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_RHOCA (Delta-aminolevulinic acid dehydratase OS=Rhodobacter capsulatus GN=hemB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23
Identity = 59/158 (37.34%), Postives = 94/158 (59.49%), Query Frame = 1
Query:  211 RKSPAMRASFQETNLSPANFVYPLFIHEGE-EDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            R++ A+R   QE  LS  + ++P+FI +    D  I +MPG  R     G ++    +RD G +  +  P    A+K+ T + A+  +    R I  +K   P++ I TD+ALDPY+++GHDG+VR DG+++NDET   L K A++QA AGAD++ P+
Sbjct:   17 RRTEALRDLAQENRLSVKDLIWPIFITDVPGADVEISSMPGVVRRTM-DGALKAAEGSRDAGHSRDLPVPLTDPAVKTETCEMAWQPDNFTNRVIAAMKQAVPEVAIMTDIALDPYNANGHDGLVR-DGILLNDETTEALVKMALAQAAAGADILGPS 172          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_PSEAE (Delta-aminolevulinic acid dehydratase OS=Pseudomonas aeruginosa GN=hemB PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22
Identity = 60/159 (37.74%), Postives = 94/159 (59.12%), Query Frame = 1
Query:  208 NRKSPAMRASFQETNLSPANFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            NR+    R   +E  L+  + + P+F+ +G  +   I +MPG  RL     L+ E  +   +G+ ++ LFP  P   KS    EAYN  G+  R    L++R+P+L I TDVALDP+++ G DGI+ +DG ++ND ++  L +QA+S A AGA VV+P+
Sbjct:   18 NRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLI-EAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPS 175          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_METTH (Delta-aminolevulinic acid dehydratase OS=Methanobacterium thermoautotrophicum GN=hemB PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22
Identity = 70/162 (43.21%), Postives = 98/162 (60.49%), Query Frame = 1
Query:  211 RKSPAMRASFQETNLSPANFVYPLFIHE--GEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            RKSP +R   +ET L P++ +YP+F+ E  G  D   I  MPG +R       V E ++  D G++SV++F  P   D L S     A++ +G+V RT+  LK+   DLV+ TDV L  Y+S GH GIV  DG I+NDET+  L + A+S A AGADVV+P+
Sbjct:   16 RKSPQIRNILRETRLHPSDLIYPMFVSEKLGRGDVEAIDTMPGQFRYSVDDA-VSEASRLEDEGLSSVLIFGMPSAKDELASA----AHDPHGVVQRTVRRLKEE-TDLVVMTDVCLCQYTSHGHCGIV-VDGEIVNDETLEVLSRIALSHAEAGADVVAPS 170          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_ARCFU (Delta-aminolevulinic acid dehydratase OS=Archaeoglobus fulgidus GN=hemB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 60/153 (39.22%), Postives = 95/153 (62.09%), Query Frame = 1
Query:  226 MRASFQETNLSPANFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            +R  F+E  LSP N + P+F+ E  +E  PI +MP  +R+     + +EV +  +  + S +LF  +P + K  TG  AY+ NG++ + +  +K  +PD VI TDV L  Y++ GH G+V+ DG I+NDET+  + K AVS A +GAD+V+P+
Sbjct:   17 LRWMFREARLSPENLITPIFVDENIKEKKPIESMPDYFRIPLEM-VDKEVEECLEKDLRSFILFG-IP-SYKDETGSSAYDQNGVIQKAVRRIKAEFPDAVIVTDVCLCEYTTHGHCGVVK-DGEIVNDETLPIIGKTAVSHAESGADIVAPS 165          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_SHIFL (Delta-aminolevulinic acid dehydratase OS=Shigella flexneri GN=hemB PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 61/158 (38.61%), Postives = 93/158 (58.86%), Query Frame = 1
Query:  211 RKSPAMRASFQETNLSPANFVYPLFIHEGEED-TPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            RKSPA+RA F+ET LS  + V P+F+ E  +D   + AMPG  R+  +H L +E+ +  + G+ SV+ F          TG +A+ ++GLV R   + K   P++++ +D     Y+S GH G++ E GV  ND T+  L KQAV  A AGAD ++P+
Sbjct:   12 RKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH-LAREIERIANAGIRSVMTFGISHHT--DETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGV-DNDATLENLGKQAVVAAAAGADFIAPS 165          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_ECOLI (Delta-aminolevulinic acid dehydratase OS=Escherichia coli (strain K12) GN=hemB PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 61/158 (38.61%), Postives = 93/158 (58.86%), Query Frame = 1
Query:  211 RKSPAMRASFQETNLSPANFVYPLFIHEGEED-TPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            RKSPA+RA F+ET LS  + V P+F+ E  +D   + AMPG  R+  +H L +E+ +  + G+ SV+ F          TG +A+ ++GLV R   + K   P++++ +D     Y+S GH G++ E GV  ND T+  L KQAV  A AGAD ++P+
Sbjct:   12 RKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH-LAREIERIANAGIRSVMTFGISHHT--DETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGV-DNDATLENLGKQAVVAAAAGADFIAPS 165          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_CHLPN (Delta-aminolevulinic acid dehydratase OS=Chlamydia pneumoniae GN=hemB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 58/160 (36.25%), Postives = 94/160 (58.75%), Query Frame = 1
Query:  208 NRKSPAMRASFQETNLSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLV-QEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            NRK+ A+R    ET+LSP + + P F+  G      I ++PG +R  W   L+ +E+ +    G+ +V+LFP +PD LK   G  + N   ++  +I  +K+ +P L + +D+ALDPY++ GHDGI   +G ++NDE+V      A   A  GAD+V+P+
Sbjct:   13 NRKTAAIRDLLAETHLSPKDLIAPFFVKYGNNIKEEIPSLPGVFR--WSLDLLLKEIERLCTYGLRAVMLFPIIPDDLKDAYGSYSSNPKNILCHSIHEIKNAFPHLCLISDIALDPYTTHGHDGIFL-NGEVLNDESVRIFGNIATLHAEMGADIVAPS 169          
The following BLAST results are available for this feature:
BLAST of CX295793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HEM2_CHLP81.422e-2643.67Delta-aminolevulinic acid dehydratase OS=Chlorobac... [more]
HEM2_BACSU2.682e-2539.87Delta-aminolevulinic acid dehydratase OS=Bacillus ... [more]
HEM2_BRAJA8.628e-2437.74Delta-aminolevulinic acid dehydratase OS=Bradyrhiz... [more]
HEM2_RHOCA9.539e-2337.34Delta-aminolevulinic acid dehydratase OS=Rhodobact... [more]
HEM2_PSEAE1.246e-2237.74Delta-aminolevulinic acid dehydratase OS=Pseudomon... [more]
HEM2_METTH3.625e-2243.21Delta-aminolevulinic acid dehydratase OS=Methanoba... [more]
HEM2_ARCFU8.075e-2239.22Delta-aminolevulinic acid dehydratase OS=Archaeogl... [more]
HEM2_SHIFL1.055e-2138.61Delta-aminolevulinic acid dehydratase OS=Shigella ... [more]
HEM2_ECOLI1.055e-2138.61Delta-aminolevulinic acid dehydratase OS=Escherich... [more]
HEM2_CHLPN1.377e-2136.25Delta-aminolevulinic acid dehydratase OS=Chlamydia... [more]

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Properties
Property NameValue
Genbank descriptionC05075H12SK DroRLeaf1 Citrus clementina cDNA clone C05075H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295793 ID=CX295793; Name=CX295793; organism=Citrus clementina; type=EST; length=696bp
AAAACCGTAATGGCACGTCGTTTGGTTGTTACAGCAAGCAAATCGCACGA
TGGAGCGTCGAAGAAGCTTGGAATCAGTGACGCTGAGTGTGAGGCGGCTG
TTGTGGCGGGAAATATTCCAGAAGCGCCTCCCGTGCCACCAAAGCCTGCC
GCGCCAGCTGGAACTCCTGTAGTTCCTTCTCTTCCACTTAGTCGGCGGCC
TCGCCGTAATAGGAAGTCCCCCGCAATGAGAGCATCCTTCCAGGAAACAA
ATCTTTCACCGGCAAATTTTGTATATCCACTTTTTATTCATGAAGGAGAG
GAGGACACGCCTATTGGGGCCATGCCCGGTTGTTATAGACTTGGTTGGAG
ACATGGACTTGTTCAAGAGGTGGCGAAAGCACGGGATGTTGGTGTGAATA
GTGTTGTGCTCTTCCCCAAAGTTCCAGATGCTTTGAAGTCTCCCACAGGA
GATGAAGCATACAATGATAATGGTCTGGTGCCTCGTACAATATGGCTGCT
CAAGGATAGATACCCTGATCTTGTAATTTACACTGATGTTGCTTTAGATC
CATATTCCTCTGATGGGCATGATGGTATTGTCAGAGAAGACGGAGTCATT
ATGAATGATGAAACAGTGCATCAATTATGTAAACAAGCTGTGTCCCAGGC
CCGTGCTGGAGCAGATGTTGTGAGTCCAGCGATATGATGGATGGTC
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