CX295793

Overview
NameCX295793
Unique NameCX295793
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_MYCTU (Delta-aminolevulinic acid dehydratase OS=Mycobacterium tuberculosis GN=hemB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  211 RKSPAMRASFQETNLSPANFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIW-LLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            R + AMR    +T+L P + V P+F+ +G +E  PI +MPG  +   R  L +  A A   GV  ++LF    D  K   G    + +G++   +  L KD     V+  D  LD ++  GH G++ + G + ND TV +  + AV+QA +GA VV P+
Sbjct:   15 RSTVAMRRLVAQTSLEPRHLVLPMFVADGIDEPRPITSMPGVVQ-HTRDSLRRAAAAAVAAGVGGLMLFGVPRDQDKDGVGSAGIDPDGILNVALRDLAKDLGEATVLMADTCLDEFTDHGHCGVLDDRGRVDNDATVARYVELAVAQAESGAHVVGPS 172          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_MOUSE (Delta-aminolevulinic acid dehydratase OS=Mus musculus GN=Alad PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 43/146 (29.45%), Postives = 81/146 (55.48%), Query Frame = 1
Query:  247 TNLSPANFVYPLFIHEGEEDT-PIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            + +S +N +YP+F+ +  +D  PI ++PG  R G    L + +    + G+  V++F       K   G  A +++      + LL+  +P L++  DV L PY+S GH G++ E+G  + +E+  +L + A++ A+AG  VV+P+
Sbjct:   24 STVSASNLIYPIFVTDVPDDVQPIASLPGVARYGVNQ-LEEMLRPLVEAGLRCVLIFGVPSRVPKDEQGSAADSEDSPTIEAVRLLRKTFPSLLVACDVCLCPYTSHGHCGLLSENGAFLAEESRQRLAEVALAYAKAGCQVVAPS 168          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_RAT (Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus GN=Alad PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 48/157 (30.57%), Postives = 86/157 (54.78%), Query Frame = 1
Query:  220 PAMRASFQET--NLSPANFVYPLFIHEGEEDT-PIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            P +RA +Q T   +S  N +YP+F+ +  +D  PI ++PG  R G    L + +    + G+  V++F       K   G  A +++      + LL+  +P L++  DV L PY+S GH G++ E+G  + +E+  +L + A++ A+AG  VV+P+
Sbjct:   14 PLLRA-WQTTPSTVSATNLIYPIFVTDVPDDVQPIASLPGVARYGVNQ-LEEMLRPLVEAGLRCVLIFGVPSRVPKDEQGSAADSEDSPTIEAVRLLRKTFPTLLVACDVCLCPYTSHGHCGLLSENGAFLAEESRQRLAEVALAYAKAGCQVVAPS 168          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_MACFA (Delta-aminolevulinic acid dehydratase OS=Macaca fascicularis GN=ALAD PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 47/156 (30.13%), Postives = 84/156 (53.85%), Query Frame = 1
Query:  220 PAMRA-SFQETNLSPANFVYPLFIHEGEEDT-PIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            P +RA     T L+ +N +YP+F+ +  +D  PI ++PG  R G    L + +    + G+  V++F       K   G  A ++       I LL+  +P+L++  D+ L PY+S GH G++ E+G    +E+  +L + A++ A+AG  VV+P+
Sbjct:   14 PLLRAWQTATTTLNASNLIYPIFVTDVPDDIQPIASLPGVARYGVNR-LEEMLRPLVEEGLRCVLIFGIPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDICLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAPS 168          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_SCHPO (Delta-aminolevulinic acid dehydratase OS=Schizosaccharomyces pombe GN=hem2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.994e-12
Identity = 44/144 (30.56%), Postives = 83/144 (57.64%), Query Frame = 1
Query:  253 LSPANFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            ++ ++ +YP+FI E ++    I +MP  +R G    L + +      G+ SV+LF  + ++ K   G  A ++NG V + +  ++  +P+LV+  DV L  Y+  GH G++ EDG I N ++V ++ + + + A AGA ++SP+
Sbjct:   27 ITKSSLMYPIFISEIDDAKEAIDSMPNQFRWGVNR-LEEFLGPLVKKGLRSVILFGVI-ESKKDYCGSMADSENGPVIKAVKEIRHLFPELVVACDVCLCEYTDHGHCGLLYEDGTINNAKSVERIAEVSGNYALAGAQIISPS 168          
BLAST of CX295793 vs. ExPASy Swiss-Prot
Match: HEM2_DICDI (Delta-aminolevulinic acid dehydratase OS=Dictyostelium discoideum GN=alad PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.604e-12
Identity = 43/143 (30.07%), Postives = 85/143 (59.44%), Query Frame = 1
Query:  262 ANFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKAR-DVGVNSVVLFPKVPDALKSPTGDEA-YNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPA 681
            +  +YP+F+ +     T I ++PG Y++     LV E  +   + G+ S++LF  +   +K      A   ++  V ++I L+K+ +P+++I TD+ L  Y+  GH G++ E+G I N++++ +L + A+S A+AGA V++P+
Sbjct:   33 SQLIYPIFVTDLINTKTEIKSLPGQYQIS--SDLVVEFLRPLVEKGLKSIILFGVIISGVKDEQASSADKRESSPVIKSIELIKNEFPEILICTDLCLCAYTDHGHCGVLTEEGFIENEKSIIRLGEIALSFAKAGAHVIAPS 173          
The following BLAST results are available for this feature:
BLAST of CX295793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HEM2_MYCTU2.130e-1433.33Delta-aminolevulinic acid dehydratase OS=Mycobacte... [more]
HEM2_MOUSE2.130e-1429.45Delta-aminolevulinic acid dehydratase OS=Mus muscu... [more]
HEM2_RAT2.782e-1430.57Delta-aminolevulinic acid dehydratase OS=Rattus no... [more]
HEM2_MACFA2.782e-1430.13Delta-aminolevulinic acid dehydratase OS=Macaca fa... [more]
HEM2_SCHPO1.994e-1230.56Delta-aminolevulinic acid dehydratase OS=Schizosac... [more]
HEM2_DICDI2.604e-1230.07Delta-aminolevulinic acid dehydratase OS=Dictyoste... [more]

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Properties
Property NameValue
Genbank descriptionC05075H12SK DroRLeaf1 Citrus clementina cDNA clone C05075H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295793 ID=CX295793; Name=CX295793; organism=Citrus clementina; type=EST; length=696bp
AAAACCGTAATGGCACGTCGTTTGGTTGTTACAGCAAGCAAATCGCACGA
TGGAGCGTCGAAGAAGCTTGGAATCAGTGACGCTGAGTGTGAGGCGGCTG
TTGTGGCGGGAAATATTCCAGAAGCGCCTCCCGTGCCACCAAAGCCTGCC
GCGCCAGCTGGAACTCCTGTAGTTCCTTCTCTTCCACTTAGTCGGCGGCC
TCGCCGTAATAGGAAGTCCCCCGCAATGAGAGCATCCTTCCAGGAAACAA
ATCTTTCACCGGCAAATTTTGTATATCCACTTTTTATTCATGAAGGAGAG
GAGGACACGCCTATTGGGGCCATGCCCGGTTGTTATAGACTTGGTTGGAG
ACATGGACTTGTTCAAGAGGTGGCGAAAGCACGGGATGTTGGTGTGAATA
GTGTTGTGCTCTTCCCCAAAGTTCCAGATGCTTTGAAGTCTCCCACAGGA
GATGAAGCATACAATGATAATGGTCTGGTGCCTCGTACAATATGGCTGCT
CAAGGATAGATACCCTGATCTTGTAATTTACACTGATGTTGCTTTAGATC
CATATTCCTCTGATGGGCATGATGGTATTGTCAGAGAAGACGGAGTCATT
ATGAATGATGAAACAGTGCATCAATTATGTAAACAAGCTGTGTCCCAGGC
CCGTGCTGGAGCAGATGTTGTGAGTCCAGCGATATGATGGATGGTC
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