CX295803

Overview
NameCX295803
Unique NameCX295803
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295803 vs. ExPASy Swiss-Prot
Match: AMO1_ARTS1 (Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 37/121 (30.58%), Postives = 56/121 (46.28%), Query Frame = 2 
Query:  266 IRWANWVFNVGFDARVGTIISTASIYDINMHKYRRVLYRGFISELFIPYQDPSEGWYHITYFDNGEFGFGLTAVPLERLNDCPANAVFMDGYFASQDGTPVKTPNAVCIFERHAGDVMWRH 628
            + WA+W F VGF  R G ++      D  +   R V+ R  +SE+ +PY D +        FD+GE+  G  A  L    DC     + DG+     G P    NA+C+ E     ++W+H
Sbjct:  241 VTWADWSFRVGFTPREGLVLHQLKFKDQGVD--RPVINRASLSEMVVPYGDTAPVQAKKNAFDSGEYNIGNMANSLTLGCDCLGEIKYFDGHSVDSHGNPWTIENAICMHEED-DSILWKH 358
The following BLAST results are available for this feature:
BLAST of CX295803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
AMO1_ARTS13.602e-1130.58Primary amine oxidase OS=Arthrobacter sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC05076A10SK DroRLeaf1 Citrus clementina cDNA clone C05076A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295803 ID=CX295803; Name=CX295803; organism=Citrus clementina; type=EST; length=683bp
TAATTAGTTGAAATATAAAAAATAAAATAAAAAAACTCCAAAAGTACCTA
AAAATTTCTTCCCGTTCCACTATCAATAGGTCGAGCGGCCACTCACCACT
AAATTAAATCATAATAAATATATTTAGTATCAGTGTGCTGACGGTTTAGT
GTGGATACATTTTTATCAGTCAATCACTATTATCGTTGTTGTTTTTTCTA
CGTGTTGTTTGAAGAGTTTAATTGCAAAGCAACAATTGAAACAAATTTAA
TGTCTCTGCCATTTAATCAGATGGGCCAACTGGGTGTTCAACGTTGGATT
TGATGCGCGAGTGGGTACAATAATTTCAACGGCTTCAATTTACGATATCA
ATATGCACAAATATCGACGAGTTCTGTACAGGGGATTCATATCAGAACTA
TTCATACCATACCAAGATCCAAGTGAGGGATGGTACCACATAACATATTT
TGATAATGGTGAATTTGGGTTCGGTCTAACAGCTGTGCCTTTAGAGCGCC
TCAACGATTGCCCCGCTAACGCTGTATTTATGGATGGTTATTTTGCCAGT
CAAGATGGCACACCAGTAAAAACGCCTAATGCCGTGTGCATCTTTGAACG
ACATGCCGGCGACGTCATGTGGCGTCACACTGAAGCAGAATGCCAGGACA
TGTAACTTTCCTTTTTTATATTTGGCCTCTTTT
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