CX295821

Overview
NameCX295821
Unique NameCX295821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_ECO57 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O157:H7 GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_ECO55 (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain 55989 / EAEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_ECO24 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_CITK8 (Hydroxyacylglutathione hydrolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.031e-12
Identity = 45/136 (33.09%), Postives = 67/136 (49.26%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVI-GSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P  +DNY ++L + + G   +VDP EA PV++A+  KN     I              EL   +   V+ G    +D+  G   V+ DGD  +  GHE  +  TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFQDNYIWVLSNNE-GRCLIVDPGEAAPVLNAIKEKNWQPEAIFLTHHHHDHVGGVKELLQHFPHVVVYGPAETQDK--GTTRVVKDGDSALVLGHEFSIFATPGHTLGHICYF--SHPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_PSEF5 (Hydroxyacylglutathione hydrolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12
Identity = 48/136 (35.29%), Postives = 64/136 (47.06%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRK-NRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            +QI  +P   DNY +LL D  +    VVDP +A PV+  L +     L+ I               LK    A V G    +++IP  DI L D  +    G E  V   PGHT GHI++Y  G   +F GDTLF+
Sbjct:    2 IQISALPAFTDNYIWLLQDHRSQRCAVVDPGDAAPVLAWLEQHPGWVLSDILITHHHHDHVGGVERLKQHSAATVHGPA--REKIPARDIGLEDNQRVSILGWEFEVFAVPGHTLGHIAYYHHG--LLFCGDTLFA 133          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_PSEE4 (Hydroxyacylglutathione hydrolase OS=Pseudomonas entomophila (strain L48) GN=gloB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12
Identity = 49/138 (35.51%), Postives = 65/138 (47.10%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRK-NRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAA--VFTGDTLFS 660
            +QI+ +P   DNY +LL D       VVDP +  PV+  L +     L  I               LK   GA+V G     +RIP  DI L DG +    G    V+  PGHT GHI++Y   S    +F+GDTLF+
Sbjct:    2 IQIDALPAFSDNYIWLLQDTANRRCAVVDPGDDAPVLAWLGKHPGWVLEAILVTHHHHDHVGGVEALKHATGAQVFGPA--NERIPARDIALEDGAQVHVLGLAFDVLAMPGHTLGHIAYYTAQSPTPLLFSGDTLFA 137          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_KLEP7 (Hydroxyacylglutathione hydrolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 41/131 (31.30%), Postives = 66/131 (50.38%), Query Frame = 1
Query:  271 VPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVI-GSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            +P  +DNY ++L + + G   +VDP EA PV+ A+         I              +L+ ++ + V+ G    +D+  G+  V+ DGD+    GH+  +  TPGHT GHI +Y      +F GDT+FS
Sbjct:    6 IPAFQDNYIWVLSE-NNGRCIIVDPGEAAPVLAAIEENQWQPEAILLTHHHQDHVGGVKQLREKFPSIVVYGPAETQDK--GVTQVVGDGDRLSILGHDFSIFSTPGHTLGHICYY--SEPYLFCGDTMFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_ECOLU (Hydroxyacylglutathione hydrolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVKKF-PQIVVYGPQETQDKGTTRVVKDGEIAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFS 131          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_SODGM (Hydroxyacylglutathione hydrolase OS=Sodalis glossinidius (strain morsitans) GN=gloB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 43/130 (33.08%), Postives = 62/130 (47.69%), Query Frame = 1
Query:  271 VPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFS 660
            +P L DNY +LLH+ D   + VVDP +A PV+ AL+        +              EL   +   V G   ++ R  G   ++N+GD      H   ++  PGHT GHI FY   +  +F GDT+FS
Sbjct:    6 IPALADNYIWLLHNDDRRCL-VVDPGDATPVLQALADHRLTPVAVLLTHHHQDHVGGVSELLQHFPVPVYGP--EETRSKGATQIVNEGDSLTLLDHTFSIMALPGHTLGHIGFY--SAPWLFCGDTVFS 130          
BLAST of CX295821 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 49/140 (35.00%), Postives = 67/140 (47.86%), Query Frame = 1
Query:  256 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXEL-KARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYF--PGS---AAVFTGDTLF 657
            +++EL+P L DNY YL+ D DT    +VDP +   VI+A  + +  LT +              +L K   G KV G     DRI  +   +            V  + TP HT GHI ++   PGS   +AVFTGDTLF
Sbjct:   50 MKVELLPALTDNYMYLIIDEDTQEAAIVDPVQPQKVIEAAKKHHVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGG---DDRIGALTHKVTHLSTLQVGSLSVKCLSTPCHTSGHICYFVSKPGSSEPSAVFTGDTLF 186          
The following BLAST results are available for this feature:
BLAST of CX295821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
GLO2_ECO574.031e-1231.85Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO554.031e-1231.85Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO244.031e-1231.85Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_CITK84.031e-1233.09Hydroxyacylglutathione hydrolase OS=Citrobacter ko... [more]
GLO2_PSEF55.264e-1235.29Hydroxyacylglutathione hydrolase OS=Pseudomonas fl... [more]
GLO2_PSEE45.264e-1235.51Hydroxyacylglutathione hydrolase OS=Pseudomonas en... [more]
GLO2_KLEP76.875e-1231.30Hydroxyacylglutathione hydrolase OS=Klebsiella pne... [more]
GLO2_ECOLU6.875e-1231.85Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_SODGM1.173e-1133.08Hydroxyacylglutathione hydrolase OS=Sodalis glossi... [more]
GLO2_MOUSE1.173e-1135.00Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05076C04SK DroRLeaf1 Citrus clementina cDNA clone C05076C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295821 ID=CX295821; Name=CX295821; organism=Citrus clementina; type=EST; length=663bp
ATTTTTTCACAAAGGAAGAGAGAGAGAGAGATGCAAATGATCTCCAGAGC
ATCATCTGCTGCCATGGCCTCCTTCACTTGTTCAAGGGGGCAGAGTGGCC
TTTGTGTTGTGCCAGGACCAAGACAACTTTGCCTTAGAAAGGGTCTTCTG
TATGGTTTCATGCGCTTATTATCAATGCCATTCAAGACATTGCATTTAGC
AAGTCGATCTCTTAGAGTTGCTGAGTTTTGCAGTATCTCCAATATGTCAT
CATCGTTGCAAATTGAGTTGGTACCGTGTCTCAGGGACAACTATGCATAT
CTTTTACATGACATGGACACAGGTACTGTTGGAGTTGTTGATCCTTCTGA
AGCTGTTCCTGTGATAGATGCTTTGAGTAGGAAAAACCGAAATCTGACTT
ACATTCTAAATACACATCATCATCATGATCACACCGGTGGTAATTTGGAG
CTAAAAGCTAGGTACGGTGCAAAGGTGATTGGTTCAGGAGTAGACAAGGA
TAGGATCCCTGGCATTGATATAGTTTTGAATGATGGAGACAAATGGATGT
TTGCTGGTCATGAGGTGCACGTGATTGATACGCCTGGCCATACCCGAGGT
CATATTAGCTTCTACTTTCCTGGATCAGCGGCAGTTTTTACTGGGGACAC
TTTGTTCAGCTTA
back to top