CX295825

Overview
NameCX295825
Unique NameCX295825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length762
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CAMLR (5'-nucleotidase surE OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=surE PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.118e-13
Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG ES GL+ L + L +     + + AP ++KS   HS+TL + +     +      Y++  GTP DCV LAL  AL+    P L+ISGIN+G++ G
Sbjct:    4 ILLTNDDGYESKGLIKLAKMLKKHFKAEITIVAPANEKSACSHSITLTKPLRFQKVK---KRFYKLEDGTPADCVYLALH-ALYKNHLPDLIISGINKGANVG 102          

HSP 2 Score: 26.9498 bits (58), Expect = 9.118e-13
Identity = 13/39 (33.33%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  627 TCVVAGAREALICGVPSLSISLNWKKDEARE*FQDAVSV 743
            TC  AGA EA++ G+P++++S  ++ D+    F+ A+++
Sbjct:  110 TC--AGAMEAVLHGIPAIALSQFYQDDQKELNFKLALNI 146          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CHLTE (5'-nucleotidase surE OS=Chlorobium tepidum GN=surE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.183e-12
Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 2
Query:  308 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGAT-AYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSS 616
            KP +LV N DGIE  GL  L  ++ + G  +V V AP   +S   H +TL E + +   + N     Y VSGTPVDC+ +ALS  L   +KP L++SGIN GS+
Sbjct:    7 KPHILVCNDDGIEGLGLHALAASMKKLG--SVTVVAPAEPQSGKSHGMTLGEPLRIRRYQKNNRFFGYTVSGTPVDCIKVALSHILD--AKPDLIVSGINYGSN 106          

HSP 2 Score: 23.8682 bits (50), Expect = 1.183e-12
Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = 3
Query:  636 VAGAREALICGVPSLSISL 692
            VA ARE  I  VPSL+ SL
Sbjct:  117 VAAAREGAIQNVPSLAFSL 135          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_PELCD (5'-nucleotidase surE OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=surE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 2
Query:  314 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            ++LVTN DG+ +PG+  L ++L   GL  V V AP  D+S  GH++TL   +            + V GTP DCV+L + G L   S P LV++GINRG++ G
Sbjct:    2 LILVTNDDGVHAPGIAALADSL--HGLGQVVVVAPDRDRSAIGHALTLHAPLRADELR---PGVFAVDGTPTDCVNLGIHGLLS--SVPDLVVAGINRGANLG 97          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_GEOUR (5'-nucleotidase surE OS=Geobacter uraniireducens (strain Rf4) GN=surE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12
Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG+ +PGL  L EA+   G   V+V AP  ++S  GH++TL   +  +  E N    + V GTP DCV+L +   L    KP +V+SGINRG + G
Sbjct:    3 ILLTNDDGVRAPGLAALAEAMGAIG--EVYVVAPDREQSAVGHALTLHHPLRATRIENN---IFAVDGTPTDCVNLGIHSLLS--FKPDIVVSGINRGGNLG 97          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_HELHP (5'-nucleotidase surE OS=Helicobacter hepaticus GN=surE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.537e-12
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DG +S GL+ L +AL  + + +V V AP S+KS  GH +TL  T  +S  +++        GTP DCV LAL+    +  KP LVISGIN GS+ G
Sbjct:    4 ILLTNDDGFDSSGLLALKDAL--KDIAHVMVVAPASEKSACGHGLTL--TRPLSFVQLDDDFYKLEDGTPSDCVYLALNTLYKASCKPDLVISGINLGSNMG 101          

HSP 2 Score: 23.8682 bits (50), Expect = 1.537e-12
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  639 AGAREALICGVPSLSIS 689
            AGA E  I GVPS++IS
Sbjct:  111 AGAMEGCIQGVPSIAIS 127          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_DESAP (5'-nucleotidase surE OS=Desulforudis audaxviator (strain MP104C) GN=surE PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.538e-12
Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSA--EINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DGI +PGL  L  AL  +    +++ AP  ++S +GHS+T+   I V  A         + V GTP DCV LAL   L     P LVISGIN G + G
Sbjct:    3 ILLTNDDGIFAPGLEALRNAL-SDLAETIYIIAPDRERSATGHSITVHRPIRVREACHADGNCCGWIVDGTPADCVKLALESLL--PETPDLVISGINLGPNLG 103          

HSP 2 Score: 26.9498 bits (58), Expect = 1.538e-12
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  618 VVITCVVAGAREALICGVPSLSISL 692
            V+ +  V+ A E LI GVPSL+ISL
Sbjct:  106 VLYSGTVSAAMEGLINGVPSLAISL 130          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_SULNB (5'-nucleotidase surE OS=Sulfurovum sp. (strain NBC37-1) GN=surE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12
Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  302 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            S +  +LVTN DG ES GL+ LVEAL  + L +V V AP ++KS  GHS+TL  T  +   E++        GTP DC+ L+L+    +  KP +VISGIN G++ G
Sbjct:    2 SKRKQILVTNDDGYESEGLLALVEAL--KPLGDVTVVAPTTEKSACGHSLTL--TRPLRFVEVSEHFYKLDDGTPTDCIFLSLTKLFANEKKPDIVISGINIGANMG 104          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_THEM4 (5'-nucleotidase surE OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=surE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGA-TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +LVTN DG+ + G++ L   L ++  + V V AP++++S  GH++TLR  + +   +IN     Y VSGTP DCV + +   L    KP L+ISGINRG++ G
Sbjct:    3 ILVTNDDGVTADGILCLARYLSKK--HEVTVVAPETEQSAVGHAITLRFPLWLRKIDINEEFEIYAVSGTPADCVKMGIDVVL--KEKPDLLISGINRGNNLG 101          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_NATTJ (5'-nucleotidase surE OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=surE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 39/106 (36.79%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATA----YEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DGI +PG+  + + +     +   V AP  ++S +GH++T+ + + V++ +  G       Y V+GTP DCV LA+   +    KP LVISGINRG++ G
Sbjct:    3 VLLTNDDGIYAPGIFAMAKEIASRDEFEAVVVAPDREQSATGHAITVHKPLRVNNVKKLGEKLEIPFYSVNGTPSDCVKLAVESVMD--EKPDLVISGINRGANLG 106          
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CARHZ (5'-nucleotidase surE OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=surE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRE-----TIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622
            +L+TN DGI +PG+  L + L +EG Y + V AP  +KS +GH +T+        I   ++++ G +   V GTP DCV LA+   L     P LV+SGIN G + G
Sbjct:    3 ILLTNDDGIYAPGIKALRQVLEKEGKYELTVVAPDREKSATGHGITVHRPLRAFDITFKNSKVRGVS---VDGTPADCVKLAVEALLD--KPPDLVLSGINSGPNLG 104          
The following BLAST results are available for this feature:
BLAST of CX295825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
SURE_CAMLR9.118e-1338.835'-nucleotidase surE OS=Campylobacter lari (strain... [more]
SURE_CHLTE1.183e-1243.275'-nucleotidase surE OS=Chlorobium tepidum GN=surE... [more]
SURE_PELCD1.359e-1240.785'-nucleotidase surE OS=Pelobacter carbinolicus (s... [more]
SURE_GEOUR1.359e-1241.185'-nucleotidase surE OS=Geobacter uraniireducens (... [more]
SURE_HELHP1.537e-1244.125'-nucleotidase surE OS=Helicobacter hepaticus GN=... [more]
SURE_DESAP1.538e-1241.355'-nucleotidase surE OS=Desulforudis audaxviator (... [more]
SURE_SULNB1.776e-1243.935'-nucleotidase surE OS=Sulfurovum sp. (strain NBC... [more]
SURE_THEM42.319e-1240.785'-nucleotidase surE OS=Thermosipho melanesiensis ... [more]
SURE_NATTJ2.319e-1236.795'-nucleotidase surE OS=Natranaerobius thermophilu... [more]
SURE_CARHZ2.319e-1239.255'-nucleotidase surE OS=Carboxydothermus hydrogeno... [more]

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Properties
Property NameValue
Genbank descriptionC05076C08SK DroRLeaf1 Citrus clementina cDNA clone C05076C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295825 ID=CX295825; Name=CX295825; organism=Citrus clementina; type=EST; length=762bp
GAGGCATCTCTCTTTTTCATTAAACACGCTTCTCTCTCTCTTTAGGGTTT
TGTTTTGTCCAATTTCTCTGCTCAAAAAAGCACTTCAATTTGAAAAAAAA
GAAAAGGGAAACATGACTTCTGTGAGAAACAACTTAATGCCTCCAGGTCT
TGTGTCTAACCTGGAACAAGTGCTTTTAAACAAGAAGAAGAAGAGTAAAG
ACAATGAAGATGATGGTGATGATGGCACCAGTAAGCAATCAAACGAAGAG
GCCAATGAATCAACGGAGCCCTCTACTTCTGATTCGACGGAGAATGTTGA
TAGTTCAAAGCCTGTGCTTTTGGTCACAAATGGGGATGGAATTGAGTCTC
CTGGCCTTGTTTATCTTGTTGAAGCTTTGGTTCGTGAAGGGCTCTACAAT
GTCCACGTTTGCGCTCCTCAATCGGACAAATCAGTGTCAGGTCATTCTGT
GACACTCCGAGAAACGATTGCTGTAAGTTCTGCTGAAATTAATGGTGCCA
CAGCGTATGAAGTTTCAGGGACTCCTGTGGATTGTGTGTCATTAGCACTA
TCTGGGGCACTATTTTCTTGGTCAAAGCCTTTGCTGGTAATTAGTGGAAT
CAACCGAGGTTCAAGCTGTGGTCATCACATGTGTTGTTGCCGGAGCCAGA
GAGGCATTAATTTGTGGTGTACCTTCTCTGTCCATATCCCTAAACTGGAA
GAAAGATGAAGCCAGAGAGTGATTTCAGGATGCAGTCAGTGTCTGTTTAC
CTTGATAATGCT
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