CX295825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CAMLR (5'-nucleotidase surE OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=surE PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.118e-13 Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEV-SGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 +L+TN DG ES GL+ L + L + + + AP ++KS HS+TL + + + Y++ GTP DCV LAL AL+ P L+ISGIN+G++ G Sbjct: 4 ILLTNDDGYESKGLIKLAKMLKKHFKAEITIVAPANEKSACSHSITLTKPLRFQKVK---KRFYKLEDGTPADCVYLALH-ALYKNHLPDLIISGINKGANVG 102 HSP 2 Score: 26.9498 bits (58), Expect = 9.118e-13 Identity = 13/39 (33.33%), Postives = 27/39 (69.23%), Query Frame = 3 Query: 627 TCVVAGAREALICGVPSLSISLNWKKDEARE*FQDAVSV 743 TC AGA EA++ G+P++++S ++ D+ F+ A+++ Sbjct: 110 TC--AGAMEAVLHGIPAIALSQFYQDDQKELNFKLALNI 146
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CHLTE (5'-nucleotidase surE OS=Chlorobium tepidum GN=surE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.183e-12 Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 308 KPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGAT-AYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSS 616 KP +LV N DGIE GL L ++ + G +V V AP +S H +TL E + + + N Y VSGTPVDC+ +ALS L +KP L++SGIN GS+ Sbjct: 7 KPHILVCNDDGIEGLGLHALAASMKKLG--SVTVVAPAEPQSGKSHGMTLGEPLRIRRYQKNNRFFGYTVSGTPVDCIKVALSHILD--AKPDLIVSGINYGSN 106 HSP 2 Score: 23.8682 bits (50), Expect = 1.183e-12 Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 636 VAGAREALICGVPSLSISL 692 VA ARE I VPSL+ SL Sbjct: 117 VAAAREGAIQNVPSLAFSL 135
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_PELCD (5'-nucleotidase surE OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=surE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 314 VLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 ++LVTN DG+ +PG+ L ++L GL V V AP D+S GH++TL + + V GTP DCV+L + G L S P LV++GINRG++ G Sbjct: 2 LILVTNDDGVHAPGIAALADSL--HGLGQVVVVAPDRDRSAIGHALTLHAPLRADELR---PGVFAVDGTPTDCVNLGIHGLLS--SVPDLVVAGINRGANLG 97
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_GEOUR (5'-nucleotidase surE OS=Geobacter uraniireducens (strain Rf4) GN=surE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.359e-12 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 +L+TN DG+ +PGL L EA+ G V+V AP ++S GH++TL + + E N + V GTP DCV+L + L KP +V+SGINRG + G Sbjct: 3 ILLTNDDGVRAPGLAALAEAMGAIG--EVYVVAPDREQSAVGHALTLHHPLRATRIENN---IFAVDGTPTDCVNLGIHSLLS--FKPDIVVSGINRGGNLG 97
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_HELHP (5'-nucleotidase surE OS=Helicobacter hepaticus GN=surE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.537e-12 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 +L+TN DG +S GL+ L +AL + + +V V AP S+KS GH +TL T +S +++ GTP DCV LAL+ + KP LVISGIN GS+ G Sbjct: 4 ILLTNDDGFDSSGLLALKDAL--KDIAHVMVVAPASEKSACGHGLTL--TRPLSFVQLDDDFYKLEDGTPSDCVYLALNTLYKASCKPDLVISGINLGSNMG 101 HSP 2 Score: 23.8682 bits (50), Expect = 1.537e-12 Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 3 Query: 639 AGAREALICGVPSLSIS 689 AGA E I GVPS++IS Sbjct: 111 AGAMEGCIQGVPSIAIS 127
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_DESAP (5'-nucleotidase surE OS=Desulforudis audaxviator (strain MP104C) GN=surE PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.538e-12 Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 2 Query: 317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSA--EINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 +L+TN DGI +PGL L AL + +++ AP ++S +GHS+T+ I V A + V GTP DCV LAL L P LVISGIN G + G Sbjct: 3 ILLTNDDGIFAPGLEALRNAL-SDLAETIYIIAPDRERSATGHSITVHRPIRVREACHADGNCCGWIVDGTPADCVKLALESLL--PETPDLVISGINLGPNLG 103 HSP 2 Score: 26.9498 bits (58), Expect = 1.538e-12 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 618 VVITCVVAGAREALICGVPSLSISL 692 V+ + V+ A E LI GVPSL+ISL Sbjct: 106 VLYSGTVSAAMEGLINGVPSLAISL 130
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_SULNB (5'-nucleotidase surE OS=Sulfurovum sp. (strain NBC37-1) GN=surE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.776e-12 Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 302 SSKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 S + +LVTN DG ES GL+ LVEAL + L +V V AP ++KS GHS+TL T + E++ GTP DC+ L+L+ + KP +VISGIN G++ G Sbjct: 2 SKRKQILVTNDDGYESEGLLALVEAL--KPLGDVTVVAPTTEKSACGHSLTL--TRPLRFVEVSEHFYKLDDGTPTDCIFLSLTKLFANEKKPDIVISGINIGANMG 104
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_THEM4 (5'-nucleotidase surE OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=surE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12 Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 2 Query: 317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGA-TAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 +LVTN DG+ + G++ L L ++ + V V AP++++S GH++TLR + + +IN Y VSGTP DCV + + L KP L+ISGINRG++ G Sbjct: 3 ILVTNDDGVTADGILCLARYLSKK--HEVTVVAPETEQSAVGHAITLRFPLWLRKIDINEEFEIYAVSGTPADCVKMGIDVVL--KEKPDLLISGINRGNNLG 101
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_NATTJ (5'-nucleotidase surE OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=surE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12 Identity = 39/106 (36.79%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATA----YEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 +L+TN DGI +PG+ + + + + V AP ++S +GH++T+ + + V++ + G Y V+GTP DCV LA+ + KP LVISGINRG++ G Sbjct: 3 VLLTNDDGIYAPGIFAMAKEIASRDEFEAVVVAPDREQSATGHAITVHKPLRVNNVKKLGEKLEIPFYSVNGTPSDCVKLAVESVMD--EKPDLVISGINRGANLG 106
BLAST of CX295825 vs. ExPASy Swiss-Prot
Match: SURE_CARHZ (5'-nucleotidase surE OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=surE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12 Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 2 Query: 317 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRE-----TIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCG 622 +L+TN DGI +PG+ L + L +EG Y + V AP +KS +GH +T+ I ++++ G + V GTP DCV LA+ L P LV+SGIN G + G Sbjct: 3 ILLTNDDGIYAPGIKALRQVLEKEGKYELTVVAPDREKSATGHGITVHRPLRAFDITFKNSKVRGVS---VDGTPADCVKLAVEALLD--KPPDLVLSGINSGPNLG 104 The following BLAST results are available for this feature:
BLAST of CX295825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295825 ID=CX295825; Name=CX295825; organism=Citrus clementina; type=EST; length=762bpback to top |