CX295828

Overview
NameCX295828
Unique NameCX295828
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.116e-71
Identity = 126/229 (55.02%), Postives = 158/229 (69.00%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            +L D++E L+P+VYTPTVG AC +YG IFRRP+GL+IS+ ++G +  ++ NWPE  ++ +VVTDGERILGLGDLG  GMGIPVGKL LYTA  GIRP  CLP+ +DVGT+N  LLKD FY+GL Q+R   Q+Y +L+DEFM A+   YG   LIQFEDF NHNAF  L KY   +  FNDDIQ                    ++EH+ LFLGAGEA  GIA LI + +
Sbjct:   99 ILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSM 327          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 1.564e-70
Identity = 133/227 (58.59%), Postives = 153/227 (67.40%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIAL 683
            +L+ NVE+ +P+VYTPTVG ACQ+Y   FR+P+GL+IS+ +KG I  VL  WPE  ++ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLPIT+DVGT NE+LLKD  YIGLR RR  G EY   LDEFM A    YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA LI +
Sbjct:   89 VLMSNVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANLNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLIVM 315          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.564e-70
Identity = 131/227 (57.71%), Postives = 157/227 (69.16%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIAL 683
            +L  ++E  +P+VYTPTVG ACQ YG  FRRP+GL+I++ ++G I  +L++WPE  I+ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG++P  CLP+ +DVGT+NE LLKD  YIGLR +R  GQ Y +LLDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++H  LF GAGEA  GIA LI +
Sbjct:   78 VLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVM 304          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.485e-70
Identity = 129/227 (56.83%), Postives = 155/227 (68.28%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIAL 683
            +L+ ++E+ +P+VYTPTVG ACQ+Y   FR+P+GL+IS+ ++G +  VL  WPE  I+ +VVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGT NE+LLKD  YIGLRQRR  G EY + LDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA LI +
Sbjct:   75 VLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQGTASVAVAGILAALRITKNKLSDQTILFQGAGEAALGIAHLIVM 301          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.485e-70
Identity = 131/227 (57.71%), Postives = 153/227 (67.40%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIAL 683
            +L+ +VE+ +P+VYTPTVG ACQ+Y   FR+P+GL+IS+ +KG I  VL  WPE  ++ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLPIT+DVGT NE+LLKD  YIGLR RR  G EY   LDEFM A    YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA L+ +
Sbjct:   89 VLMSDVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKDPLYIGLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVM 315          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.485e-70
Identity = 130/229 (56.77%), Postives = 156/229 (68.12%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            +L  ++E+ +P+VYTPTVG ACQ+Y  +FR+P+GL+I++ ++G I  VL  WPE  I+ IVVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGT NE+LLKD  YIGLRQRR  G EY + LDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++   LF GAGEA  GIA LI + +
Sbjct:   89 VLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMAL 317          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.485e-70
Identity = 128/229 (55.90%), Postives = 160/229 (69.87%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            +L  +VE+ +P+VYTPTVG ACQ YG  FRRP+GL+I++ +KG I  +L +WPE +I+ +VVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGTNNE+LL+D  YIGL+ +R  G+EY +LLDEFM AV   +G   LIQFEDFAN NAF LL KY   + +FNDDIQ                    L+ H F+F GA EA  GIA L+ + +
Sbjct:  124 VLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVRGEEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNRLSNHVFVFQGADEAAMGIAHLLVMAL 352          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.485e-70
Identity = 126/229 (55.02%), Postives = 157/229 (68.56%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            +L D++E L+P+VYTPTVG AC +YG IFRRP+GL+IS+ ++G +  ++ NWPE  ++ +VVTDGERILGLGDLG  GMGIPVGKL LYTA  GI+P  CLP+ +DVGT+N  LLKD FY+GL Q+R   Q Y +L+DEFM A+   YG   LIQFEDF NHNAF  L KY   +  FNDDIQ                    ++EH+ LFLGAGEA  GIA LI L +
Sbjct:   99 ILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPEKCLPVCIDVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAALGIANLIVLSM 327          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 7.763e-70
Identity = 127/229 (55.46%), Postives = 160/229 (69.87%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            +L  +VE+ +P+VYTPTVG ACQ YG  FRRP+GL+I++ +KG +  +L +WPE +I+ +VVTDGERILGLGDLGC GMGIPVGKLALYTA GG+ P  CLP+ +DVGTNNE+LL+D  YIGL+ +R  G+ Y +LLDEFM AV   +G   LIQFEDFAN NAF LL KY   + +FNDDIQ                    L+ H F+F GAGEA  GIA L+ + +
Sbjct:  124 VLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMAL 352          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.260e-68
Identity = 125/227 (55.07%), Postives = 160/227 (70.48%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKG--KILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            ++ D+V+EL+P+VYTPTVG ACQ +G I+R+P+GLYI++ +    KI ++L NW E  ++ IVVTDGERILGLGDLG  G+GIPVGKLALY ALGG++P  CLP+ +DVGTNN  LL D FYIGLR +R  G++Y  LLD FM A  + YG+K LIQFEDFAN NAF LL KY   + +FNDDIQ                    +++ ++LF GAG A TGIAE+I
Sbjct:  151 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMI 377          
The following BLAST results are available for this feature:
BLAST of CX295828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOM_HUMAN4.116e-7155.02NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAOX_RAT1.564e-7058.59NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOX_COLLI1.564e-7057.71NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOX_PIG3.485e-7056.83NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAOX_MOUSE3.485e-7057.71NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOX_HUMAN3.485e-7056.77NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAON_MOUSE3.485e-7055.90NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOM_MOUSE3.485e-7055.02NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAON_HUMAN7.763e-7055.46NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAOM_ASCSU4.260e-6855.07NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]

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Properties
Property NameValue
Genbank descriptionC05076C11SK DroRLeaf1 Citrus clementina cDNA clone C05076C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295828 ID=CX295828; Name=CX295828; organism=Citrus clementina; type=EST; length=691bp
AGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCA
ACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCA
GGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGA
AGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAG
CGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGT
TGGGAAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTCCCTCAGCAT
GTTTGCCCATAACCGTTGATGTGGGTACAAACAATGAGCAATTGTTGAAG
GATGAATTCTACATTGGTCTACGACAGAGGAGGGCAACCGGACAGGAATA
TGCTGAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATGGAG
AAAAAGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTTGAG
TTGCTTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATATACA
GGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGTTGA
TTGGTGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGGGAG
GCTGGGACTGGTATAGCTGAACTTATTGCGCTTGAGATATC
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