CX295828

Overview
NameCX295828
Unique NameCX295828
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig82 contig Ccv1_Contig82:582..1272. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_COLP3 (NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.330e-53
Identity = 108/225 (48.00%), Postives = 148/225 (65.78%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +N+ E++P++YTPTVG+AC+++  I+R  +GL+IS +++  I ++L+N  +  ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN++LL D  Y+G R +R     Y E L+ F+SAVK+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E    F+GAG AG GIAE I
Sbjct:   88 LVQNNLAEMMPIIYTPTVGDACEQFSDIYRSSRGLFISYEDRFNIDDMLRNATKNKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAHTLPVMLDVGTNNQKLLDDPMYMGARHKRIDQDSYDEFLELFISAVKRRW-PNVLLQFEDFAQPNAMPLLQRYKDRICCFNDDIQGTASVTVGTLLAACRSKGSKLSELNVAFVGAGSAGCGIAEQI 311          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.509e-52
Identity = 105/228 (46.05%), Postives = 140/228 (61.40%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAE---HRFLFLGAGEAGTGIAELI 677
            ++++N  EL P++YTP VGEACQK+  IF + +G+Y S  ++G++  V  NWP   + VIVVTDG RILGLGDLG  GM IP+GKL LY   GGI P   LPI +DVGTNN++LL D  Y+G++  R  G+E+   +DE++SA+   +  K +IQFEDF   NA +LL KY     +FNDDIQ                   T A+     FL LGAG +G G+ E I
Sbjct:  121 MILENFVELAPIIYTPVVGEACQKFHKIFTQTRGMYFSTADRGQMSAVAANWPYDDVDVIVVTDGSRILGLGDLGAGGMQIPIGKLTLYVCGGGINPRNVLPIVLDVGTNNKELLNDPLYLGMQHPRLQGEEFHAFVDEWVSAITDRF-PKAVIQFEDFMMPNALDLLLKYKDQICMFNDDIQSTGAITLASVLATMRARGGTFADIKKETFLCLGAGSSGVGVCETI 347          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.165e-49
Identity = 95/224 (42.41%), Postives = 138/224 (61.61%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAE---HRFLFLGAGEAGTGI 665
            +LI+N+EE  P+V TPTVG  CQK+  ++RRP+G+Y S  ++G+++ ++ NWP   + +IVVTDG RILGLGDLG  G+G+ +GKL LY A  GI P   LP+ +DVGTNNE LLK+  Y+GL+++R  G+EY  ++DEFM AV   +   V++QFED  N  A  LL +Y   +  FN D+Q                    + +    + +  GAG +G G+
Sbjct:  130 VLIENIEEYAPIVSTPTVGLVCQKFSGLYRRPRGMYFSSDDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGVAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEDLLKNPLYLGLQKKRLDGEEYLAVMDEFMEAVFTRW-PNVIVQFEDIQNKWALTLLQRYRHKYRTFNVDVQGTSGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSSGVGV 352          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.515e-44
Identity = 96/227 (42.29%), Postives = 133/227 (58.59%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERS--IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            LL +++ E+LPVVYTPTVGEA Q+Y   +RRPQG+Y+S+     I +  +N    +  I +IV TD E ILG+GD G  G+ I +GKLA+YTA  GI PS  +P+ +DVGTNNE+LL D  YIG +  R  G+ Y   +D ++ A  + +  K L+ +ED  N NA  ++ KY    L FNDDIQ                   ++ + R +  GAG AG GIA+ I
Sbjct:  109 LLKNHLREMLPVVYTPTVGEAIQEYSHEYRRPQGIYLSIDNIDGIEKAFENLHATAGDIDLIVATDSESILGIGDWGVGGINIAIGKLAVYTAAAGIDPSRVIPVVLDVGTNNEKLLNDPLYIGNKHERVQGERYEAFIDAYVKAALK-FFPKALLHWEDLGNKNARNIMKKYNHEILTFNDDIQGTGAITLAGVLAAMKKTGASIKDQRVVIFGAGSAGIGIADQI 334          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 7.317e-44
Identity = 97/228 (42.54%), Postives = 136/228 (59.65%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNW---PERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            +L D++ EL+PVVYTPTVGEA Q++   +R  +GL++S+ E  +I E        PE  + +IV TD E ILG+GD G  G+ I VGKLALYTA GG+ P  CL +++DVGT+NEQLL D FY+G R  R  G+EY E +  ++   ++ +  + ++ FEDF   NA ++L  YGT + VFNDD+Q                    L +   +  GAG AG GIA+ I
Sbjct:   83 VLADHLPELMPVVYTPTVGEAIQRFSDEYRGQRGLFLSIDEPDEIEEAFNTLGLGPE-DVDLIVCTDAEAILGIGDWGVGGIQIAVGKLALYTAGGGVDPRRCLAVSLDVGTDNEQLLADPFYLGNRHARRRGREYDEFVSRYIETAQRLF-PRAILHFEDFGPANARKILDTYGTDYCVFNDDMQGTGAVVLAAVYSGLKVTGIPLRDQTIVVFGAGTAGMGIADQI 308          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43
Identity = 91/225 (40.44%), Postives = 131/225 (58.22%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERS--IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAE 671
            LL D++ E+LP+VYTPTVG A Q+Y   +R+P+GLY+S+ +   + E  K + ++S  I +IV TD E ILG+GD G  G+ I +GKLA+YTA  GI PS  L + +D GTN E LL D  Y+G +  R  G+ Y + +D++++  ++ +    L+ +EDF   NA  +L +Y      FNDDIQ                    L +HR +  GAG AG GIAE
Sbjct:   92 LLNDHLGEMLPIVYTPTVGTAIQRYSHEYRKPRGLYLSIDDPDGMKEAFKQYKDQSDTIDLIVATDAEGILGIGDWGVGGIAISIGKLAVYTAAAGIDPSRVLAVVLDAGTNQESLLNDPLYVGNQHSRVRGERYDQFIDDYVALARETF-PNALLHWEDFGAKNARSILKRYKDKVCTFNDDIQGTGAVSLAAVLSCAKASKVPLRDHRVVIFGAGTAGIGIAE 315          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39
Identity = 92/226 (40.71%), Postives = 130/226 (57.52%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWP-ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+  +++EL+P++YTPT G+A   Y   FR+P+G+++ + E   I   L  +  ++ +  IVV+D E ILG+GD G  G+ I + KLAL T  GGI P   LP+ +DVGTNN++L +DE Y+G +  R  G++Y + L++F+ AVK+ Y   VL  FEDF   NA  LL KY      FNDDIQ                    L + R L  GAG AG GIA+ I
Sbjct:  174 LIRRHIKELVPIIYTPTEGDAIAAYSHRFRKPEGVFLDITEPDSIECRLATYGGDKDVDYIVVSDSEGILGIGDQGIGGVRIAISKLALMTLCGGIHPGRVLPVCLDVGTNNKKLARDELYMGNKFSRIRGKQYDDFLEKFIKAVKKVYPSAVL-HFEDFGVKNARRLLEKYRYELPSFNDDIQGTGAVVMASLIAALKHTNRDLKDTRVLIYGAGSAGLGIADQI 398          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37
Identity = 86/227 (37.89%), Postives = 122/227 (53.74%), Query Frame = 3
Query:   15 NVEELLPVVYTPTVGEACQKYGSIFRRPQ-GLYISLKEKGKILEVLKNWP-ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            ++ E  PVVY PT+ +  + Y  +F  PQ   Y+ +     I E LKN   +R I++IVVTD E ILG+GD G QG+ I VGKL +YTA  GI P++ LP+ +D GTN ++LL+D  Y+G  Q R  G +Y   +D+F+   +  +  K+ + +EDF   NA  +L  Y T    FNDDIQ                    L +  +L  G G AG GIA  +  E+
Sbjct:   81 HIVEFNPVVYDPTIADTIENYSHLFVDPQYAAYLDINHPENITETLKNAAGDREIRLIVVTDAEGILGIGDWGTQGVDISVGKLMIYTAAAGIDPASVLPVVIDAGTNRKELLEDHLYLGNHQERIYGDQYYSFVDQFVETAESIF-PKLYLHWEDFGRSNAATILNNYKTKIPTFNDDIQGTGIVVLGGIFGSLDITGEKLTDQVYLCYGGGSAGAGIAGRVHAEM 306          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.251e-35
Identity = 82/231 (35.50%), Postives = 122/231 (52.81%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGL-YISLKEKGKILEVLKNWPE-RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            L   +V E +P+VY PT+ +  + Y  +F  PQG  ++ +     I   LKN    R I+++VV+D E ILG+GD G QG+ I VGKL +YT   GI PS  L + +D GTNNE+LLKD  Y+G +  R  G +Y + +D+F++  +  +   + + +EDF   NA  +L  Y      FNDDIQ                    L +  ++  GAG AG GI + +  E+
Sbjct:   78 LFSQHVVEFMPIVYDPTIADTIENYSELFVEPQGAAFLDINHPENIQSTLKNAANGRDIKLLVVSDAEGILGIGDWGVQGVDIAVGKLMVYTVAAGIDPSTVLAVVIDAGTNNEKLLKDPMYLGNKFNRVRGDKYYDFIDKFVNHAESLF-PNLYLHWEDFGRSNASNILNSYKDKIATFNDDIQGTGIVVLAGVLGALKISGQKLTDQTYMSFGAGTAGMGIVKQLHEEM 307          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 84/228 (36.84%), Postives = 124/228 (54.39%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISL--KEKGKILEVLKNWPER-SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+  ++ E++P++YTPT G+A +++  I+R P+G Y+ +   +   I + L  + +  S++ I++TD E ILG+GD G  G+ I V K  L T   G+ P+  LPI +DVGTNNE   K+  Y+GLR+ R  G++Y   LD  + A+++ + E   I FEDF   NA  +L  Y      FNDDIQ                    L E R +  GAG AG GIA  I
Sbjct:   90 LISQHLIEMIPIIYTPTEGDAIKQFSDIYRYPEGCYLDIDHNDLSYIKQQLSEFGKSDSVEYIIITDSEGILGIGDQGVGGVLISVAKGHLMTLCAGLDPNRFLPIVLDVGTNNETHRKNHQYMGLRKDRVRGEQYDSFLDNVIKAIREVFPE-AFIHFEDFGLANAKRILDHYRPDIACFNDDIQGTGAVALAAIIGALHVTKSPLTEQRIMIFGAGTAGVGIANQI 316          
The following BLAST results are available for this feature:
BLAST of CX295828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_COLP31.330e-5348.00NAD-dependent malic enzyme OS=Colwellia psychreryt... [more]
MAOH_NEOFR2.509e-5246.05Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAOM_AMAHP1.165e-4942.41NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAO2_BACSU2.515e-4442.29Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAOX_MYCTU7.317e-4442.54Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MAO3_BACSU2.780e-4340.44Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAOM_YEAST1.865e-3940.71NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MLES_LACLA2.977e-3737.89Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MLES_OENOE1.251e-3535.50Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MAOX_SCHPO1.806e-3436.84NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC05076C11SK DroRLeaf1 Citrus clementina cDNA clone C05076C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295828 ID=CX295828; Name=CX295828; organism=Citrus clementina; type=EST; length=691bp
AGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCA
ACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCA
GGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGA
AGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAG
CGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGT
TGGGAAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTCCCTCAGCAT
GTTTGCCCATAACCGTTGATGTGGGTACAAACAATGAGCAATTGTTGAAG
GATGAATTCTACATTGGTCTACGACAGAGGAGGGCAACCGGACAGGAATA
TGCTGAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATGGAG
AAAAAGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTTGAG
TTGCTTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATATACA
GGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGTTGA
TTGGTGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGGGAG
GCTGGGACTGGTATAGCTGAACTTATTGCGCTTGAGATATC
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