CX295828

Overview
NameCX295828
Unique NameCX295828
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_AERHH (NAD-dependent malic enzyme OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sfcA PE=3 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.327e-61
Identity = 118/229 (51.53%), Postives = 162/229 (70.74%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LL +++ E+LPV+YTPTVG+AC+++ +I+RR +GL+IS  +K +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+ CLP+ +DVGTNN+QLL D FY+G R  R +G+EYAE +D F+ AVK+ + + +L+QFEDFA +NA  LL +Y      FNDDIQ                    L+E R  FLGAG AG GIAE I  ++
Sbjct:   91 LLTNHLTEMLPVIYTPTVGKACEEFSNIYRRARGLFISYPDKDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYCLPVVLDVGTNNQQLLNDPFYMGWRNPRISGEEYAEFVDAFIQAVKRRWPD-ILLQFEDFAQNNAMPLLNRYKNELCCFNDDIQGTAAVTLGSLIAACKASGAKLSEKRVAFLGAGSAGCGIAEQIVAQM 318          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.264e-61
Identity = 118/229 (51.53%), Postives = 162/229 (70.74%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LL +++ E+LPV+YTPTVG+AC+++ +I+RR +GL+IS  +K +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+ CLP+ +DVGTNN+QLL D FY+G R  R +G+EYAE +D F+ AVK+ + + +L+QFEDFA +NA  LL +Y      FNDDIQ                    L+E R  FLGAG AG GIAE I  ++
Sbjct:   91 LLHNHLTEMLPVIYTPTVGKACEEFSNIYRRARGLFISYPDKDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYCLPVVLDVGTNNQQLLSDPFYMGWRNPRISGEEYAEFVDAFIQAVKRRWPD-ILLQFEDFAQNNAMPLLNRYKNELCCFNDDIQGTAAVTLGSLIAACKASGAKLSEKRVAFLGAGSAGCGIAEQIVAQM 318          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.242e-59
Identity = 119/225 (52.89%), Postives = 154/225 (68.44%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+  ++EE++P++YTPTVG+AC+K+  I+RR +GL+IS  E+ KI ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+ CLPI +DVGTNN+QLL D  Y+G R  R +G EY E +D F+ AVK+ + E VL+QFEDFA  NA  LL KY      FNDDIQ                    L++    FLGAG AG GIAE I
Sbjct:   87 LIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTNNQQLLDDPMYMGWRNPRISGDEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQENATPLLNKYRDQLCCFNDDIQGTAAVSVGTLIAACLNKSQKLSQQNIAFLGAGSAGCGIAEHI 310          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.622e-59
Identity = 116/229 (50.66%), Postives = 152/229 (66.38%), Query Frame = 3
Query:    6 LIDN-VEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            LIDN +EE++P++YTPTVG AC+++ +I+RR +GL++   +KG I+++L N   + +++IV+TDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGTNN QLL D  Y+G R  R TGQEY + ++EF+ AVK  +    LIQFEDFA  NA  LL +Y      FNDDIQ                    L+E R  F+GAG AG GIAE I  ++
Sbjct:   88 LIDNHIEEMMPIIYTPTVGAACEQFSNIYRRGRGLFLGYPDKGNIVDILNNAARQDVKIIVITDGERILGLGDQGIGGMGIPIGKLALYTACGGINPANTLPIVLDVGTNNTQLLSDPMYMGWRHPRITGQEYDDFVEEFIQAVKSRW-PNALIQFEDFAQKNAMPLLNRYKDKVCCFNDDIQGTAAVTVGSLLAACKAAGSELSEQRITFVGAGSAGCGIAEAIVAQM 315          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.119e-59
Identity = 117/225 (52.00%), Postives = 155/225 (68.89%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+  ++EE++P++YTPTVG+AC+K+  I+RR +GL+IS  ++ KI ++L+N  ++ ++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+ CLPI +DVGTNN+QLL D  Y+G R +R +G EY E +D F+ AVK+ + E VL+QFEDFA  NA  LL +Y      FNDDIQ                    L++ +  FLGAG AG GIAE I
Sbjct:   87 LIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPDRHKIDDMLQNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTNNQQLLDDPMYMGWRNQRISGDEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQENATPLLNRYRDQLCCFNDDIQGTAAVSVGTLIAACLNKGQKLSQQKIAFLGAGSAGCGIAEHI 310          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.721e-59
Identity = 113/229 (49.34%), Postives = 154/229 (67.25%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            L+ D++EE++P++YTPTVGEACQ++  I+RR +G++IS  ++  I ++L+N  +R+++VIV+TDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPIT+DVGTNN+QLL D  Y+G RQ R +G EY E +D+ ++ +++ +    LIQFEDFA  NA  LL KY      FNDDIQ                    L +    FLGAG AG GIAE I  ++
Sbjct:   92 LINDHLEEMMPIIYTPTVGEACQRFSDIYRRHRGIFISYPDREHIDDILQNVSKRNVKVIVITDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPITIDVGTNNQQLLNDPIYMGWRQPRISGDEYYEFIDQVLTGIRRRW-PHALIQFEDFAQKNAMPLLTKYRDKFCCFNDDIQGTAAVSVGSLIAASRAAGKQLKDQTITFLGAGSAGCGIAEQIVAQM 319          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.052e-58
Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEI 689
            L+ +++EE++P++YTPTVG AC+++  I+RR +GL++S  E+ KI ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+ CLPI +DVGTNN QLL D  Y+G R  R TG+EY E +D F+ AVK+ + E VL+QFEDFA  NA  LL KY      FNDDIQ                    L++ R  FLG+G AG GIA+ I  ++
Sbjct:   87 LIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRGLFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPIVLDVGTNNSQLLADPMYMGWRNPRITGEEYNEFVDLFIQAVKRRWPE-VLLQFEDFAQTNATPLLNKYRDQICCFNDDIQGTAAVSVGTLIAACQNKGEKLSDQRIAFLGSGSAGCGIAQHIVRQM 314          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SHISS (NAD-dependent malic enzyme OS=Shigella sonnei (strain Ss046) GN=sfcA PE=3 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.373e-58
Identity = 114/225 (50.67%), Postives = 154/225 (68.44%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I
Sbjct:   91 LVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMI 314          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SHIFL (NAD-dependent malic enzyme OS=Shigella flexneri GN=sfcA PE=3 SV=4)

HSP 1 Score: 226.098 bits (575), Expect = 1.373e-58
Identity = 114/225 (50.67%), Postives = 154/225 (68.44%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I
Sbjct:   91 LVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMI 314          
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SHIF8 (NAD-dependent malic enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=sfcA PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.373e-58
Identity = 114/225 (50.67%), Postives = 154/225 (68.44%), Query Frame = 3
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE+I
Sbjct:   91 LVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMI 314          
The following BLAST results are available for this feature:
BLAST of CX295828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_AERHH1.327e-6151.53NAD-dependent malic enzyme OS=Aeromonas hydrophila... [more]
MAO1_AERS42.264e-6151.53NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]
MAO1_PSYCK1.242e-5952.89NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAO12_PHOPR1.622e-5950.66NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]
MAO1_PSYA22.119e-5952.00NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MAO1_ACIAD4.721e-5949.34NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_PSYIN1.052e-5851.09NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAO1_SHISS1.373e-5850.67NAD-dependent malic enzyme OS=Shigella sonnei (str... [more]
MAO1_SHIFL1.373e-5850.67NAD-dependent malic enzyme OS=Shigella flexneri GN... [more]
MAO1_SHIF81.373e-5850.67NAD-dependent malic enzyme OS=Shigella flexneri se... [more]

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Properties
Property NameValue
Genbank descriptionC05076C11SK DroRLeaf1 Citrus clementina cDNA clone C05076C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295828 ID=CX295828; Name=CX295828; organism=Citrus clementina; type=EST; length=691bp
AGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCA
ACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCA
GGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGA
AGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAG
CGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGT
TGGGAAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTCCCTCAGCAT
GTTTGCCCATAACCGTTGATGTGGGTACAAACAATGAGCAATTGTTGAAG
GATGAATTCTACATTGGTCTACGACAGAGGAGGGCAACCGGACAGGAATA
TGCTGAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATGGAG
AAAAAGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTTGAG
TTGCTTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATATACA
GGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGTTGA
TTGGTGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGGGAG
GCTGGGACTGGTATAGCTGAACTTATTGCGCTTGAGATATC
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