CX295828

Overview
NameCX295828
Unique NameCX295828
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALNS (NAD-dependent malic enzyme OS=Salmonella newport (strain SL254) GN=sfcA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALHS (NAD-dependent malic enzyme OS=Salmonella heidelberg (strain SL476) GN=sfcA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALEP (NAD-dependent malic enzyme OS=Salmonella enteritidis PT4 (strain P125109) GN=sfcA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALCH (NAD-dependent malic enzyme OS=Salmonella choleraesuis GN=sfcA PE=3 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
[Close]
BLAST of CX295828 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.163e-57
Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 3 
Query:    3 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELI 677
            L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I
Sbjct:   91 LVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQGTAAVTVGTLIAASRAAGSQLSEQKIVFLGAGSAGCGIAEQI 314
The following BLAST results are available for this feature:
BLAST of CX295828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SALSV1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALPA1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALNS1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella newport (... [more]
MAO1_SALHS1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella heidelber... [more]
MAO1_SALG21.163e-5750.22NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO1_SALEP1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella enteritid... [more]
MAO1_SALDC1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO1_SALCH1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella choleraes... [more]
MAO1_SALAR1.163e-5750.22NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]

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Properties
Property NameValue
Genbank descriptionC05076C11SK DroRLeaf1 Citrus clementina cDNA clone C05076C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295828 ID=CX295828; Name=CX295828; organism=Citrus clementina; type=EST; length=691bp
AGCTACTGATTGATAATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCA
ACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCA
GGGTCTATACATAAGTCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGA
AGAACTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAG
CGCATTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGT
TGGGAAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTCCCTCAGCAT
GTTTGCCCATAACCGTTGATGTGGGTACAAACAATGAGCAATTGTTGAAG
GATGAATTCTACATTGGTCTACGACAGAGGAGGGCAACCGGACAGGAATA
TGCTGAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATGGAG
AAAAAGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTTGAG
TTGCTTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATATACA
GGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGTTGA
TTGGTGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGGGAG
GCTGGGACTGGTATAGCTGAACTTATTGCGCTTGAGATATC
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