CX295829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43 Identity = 83/145 (57.24%), Postives = 102/145 (70.34%), Query Frame = 1 Query: 247 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 681 E T++ +KPDGVQRGLVG+I+ RFE + LAEEHY +PFF L+ +ITSGPVV M WEG GV+ASARKLIG+T PL++EPGTIRGDLAV GRNV+HGSD+PE + EIGLWF+ EL W+P+ W Sbjct: 3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFQPSELNDWSPSDQAW 147
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_SYNP2 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndk PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43 Identity = 81/149 (54.36%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T++MVKPDGVQRGLVGD+I RFE ++LAE+HY +PFF L+E+I S PVV M WEG G +A+ARK+IG+T+PL+AEPGTIRGD V GRN++HGSD P+ EI LWF E EL W PA WL E Sbjct: 1 MERTFVMVKPDGVQRGLVGDVIRRFEAKGFKLVGLKLVSVSRELAEQHYGVHRERPFFGSLVEFIISVPVVAMVWEGKGAIAAARKIIGATNPLEAEPGTIRGDFGVDIGRNLIHGSDGPDTAASEIALWFSESELANWEPATKAWLYE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_TRIEI (Nucleoside diphosphate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=ndk PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.728e-43 Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T+I +KPDGVQRGLVG IISRFE K+LAE+HY +PFF LIE+I SGP+V M WEG GVVASARK+IG+T+PL AEPGTIRGD + GRN++HGSD+ E + EI LWFKE EL W P W+ E Sbjct: 1 MERTFIAIKPDGVQRGLVGQIISRFETKGFTLVGLKIMTVTKELAEKHYDVHKERPFFSSLIEFIKSGPLVAMVWEGEGVVASARKIIGATNPLTAEPGTIRGDYGISLGRNLIHGSDAIETAQTEINLWFKEEELVSWKPTLTSWIVE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.728e-43 Identity = 83/146 (56.85%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 681 VE T++ +KPDGVQRGLVG+I+ RFE ++LA EHY +PFF L+++ITSGPVV M WEG GV+ASARKLIG+T PL+AEPGTIRGDLAV GRNV+HGSD P+ + EI LWF EL WTP+ W Sbjct: 3 VERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPEELNAWTPSDQSW 148
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43 Identity = 82/146 (56.16%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 681 +E T++ +KPDGVQRGLVG+I+ RFE +DLA EHY +PFF L+++ITSGPV+ M WEG GV+ASARKLIG+T PL AEPGTIRGDLAV GRNV+HGSD P+ + EI LWF EL WTP+ W Sbjct: 3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSAEELNAWTPSDQSW 148
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43 Identity = 83/145 (57.24%), Postives = 102/145 (70.34%), Query Frame = 1 Query: 247 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQW 681 E T+I +KPDGVQRGLVG+I+ RFE + LAE+HY +PFF L+++ITSGPVV M WEG GV+ASARKLIG+T PL+AEPGTIRGDLAV GRNV+HGSD+ E + EIGLWF+ EL W+P+ W Sbjct: 3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAAETAQFEIGLWFQASELNDWSPSDQGW 147
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43 Identity = 82/149 (55.03%), Postives = 106/149 (71.14%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E+T+IM+KPDGVQRGLVG+IISRFE + AE+HY DL++KPFF L+EYI SGPVV M WEG GVVA+ RKLIG+T+PL +EPGTIRGD A+ GRNV+HGSD+ ++ +EI LWF +G + W + W+ E Sbjct: 1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDG-VVHWQSSLHSWIYE 148
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDKA_DROYA (Nucleoside diphosphate kinase (Fragment) OS=Drosophila yakuba GN=awd PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43 Identity = 79/148 (53.38%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 247 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 E T+IMVKPDGVQRGLVG II RFE K+L E+HY DL+++PFFP L+ Y+ SGPVV M WEG VV + R+++G+T+P + PGTIRGD +Q GRN++HGSD+ E+ ++EI LWF E EL WTPA W+ E Sbjct: 3 ERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 150
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDKA_DROME (Nucleoside diphosphate kinase OS=Drosophila melanogaster GN=awd PE=1 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43 Identity = 79/148 (53.38%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 247 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 E T+IMVKPDGVQRGLVG II RFE K+L E+HY DL+++PFFP L+ Y+ SGPVV M WEG VV + R+++G+T+P + PGTIRGD +Q GRN++HGSD+ E+ ++EI LWF E EL WTPA W+ E Sbjct: 6 ERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPGLVNYMNSGPVVPMVWEGLNVVKTGRQMLGATNPADSLPGTIRGDFCIQVGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 153
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43 Identity = 82/149 (55.03%), Postives = 105/149 (70.47%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E+T+IM+KPDGVQRGLVG+IISRFE + AE+HY DL++KPFF L+EYI SGPVV M WEG GVV + RK+IG+T+PL +EPGTIRGD A+ GRNV+HGSD+ E+ +EI LWF EG + W + W+ E Sbjct: 1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEG-VVNWQSSLHSWIYE 148 The following BLAST results are available for this feature:
BLAST of CX295829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295829 ID=CX295829; Name=CX295829; organism=Citrus clementina; type=EST; length=710bpback to top |