CX295829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_BREBN (Nucleoside diphosphate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ndk PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.361e-38 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWL 684 +E+T++MVKPDGVQR L+G+I+SRFE ++LAEEHY + +PFF +L+++ITSGPV M W+G V+ +AR ++G T+P+ A GTIRGD A G N++HGSDSPE+ +REIGLWF E+ + +W+ Sbjct: 1 MEKTFLMVKPDGVQRNLIGEIVSRFEKKGYQLVGAKLMTVSRELAEEHYAEHKERPFFGELVDFITSGPVFAMVWQGNNVITTARAMMGKTNPVDAASGTIRGDFATSVGMNIIHGSDSPESAEREIGLWFSAEEVLSFEKTIQRWI 147
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_SYMTH (Nucleoside diphosphate kinase OS=Symbiobacterium thermophilum GN=ndk PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.308e-38 Identity = 73/135 (54.07%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGE 648 +E +++MVKPDGVQRGL+G++ISR E + ++LAEEHY L KPFFP LIE+ITSGPV+ M WEG ++ RK +G+T+P AEPGTIR D A NVVHGSD PE+ +REI LWF E E Sbjct: 1 MERSFVMVKPDGVQRGLIGEVISRLERRGLKLVAAKLMRVSRELAEEHYAQLKDKPFFPSLIEFITSGPVMAMVWEGPNAISIIRKTMGATNPANAEPGTIRADFACDVSYNVVHGSDGPESAEREIRLWFGEVE 135
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.308e-38 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWL 684 +E+T++MVKPDGVQR L+G+I+ RFE Q LAE HY + +PFF +L+++ITSGPV M WEG V+A+ARK++G T+PL+A+P TIRGD + G+N++HGSDS E+ +REI L+F E E+ + W+ Sbjct: 1 MEKTFLMVKPDGVQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVGKNIIHGSDSAESAEREITLFFTENEIVSYEKQANNWI 147
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDKM_HUMAN (Nucleoside diphosphate kinase, mitochondrial OS=Homo sapiens GN=NME4 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.308e-38 Identity = 74/138 (53.62%), Postives = 90/138 (65.22%), Query Frame = 1 Query: 247 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQW 660 E T + VKPDGVQR LVGD+I RFE Q P+ + EHY+DL KPF+P LI Y++SGPVV M WEG VV ++R +IG TD +A PGTIRGD +V RNV+H SDS E +REI LWF+ EL W Sbjct: 38 ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSW 175
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_NATPD (Nucleoside diphosphate kinase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=ndk PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.085e-37 Identity = 77/153 (50.33%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 235 MEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDS-PENGKREIGLWFKEGELCQWTPAQAQWLRE 690 M E T++MVKPDGVQRGL+GDI+SRFE Q +LA EHY + KPFF +L E+ITSGPV M WEG VA R ++G TDP ++ PGTIRGD + GRNV+HGSD+ P + +REIGL+F + EL + WL E Sbjct: 1 MADTERTFVMVKPDGVQRGLIGDIVSRFEDRGLKLVAGKFMQIDDELAREHYAEHVDKPFFDELKEFITSGPVFAMVWEGQDAVAQVRTMMGETDPAESAPGTIRGDFGLDLGRNVIHGSDTEPGSAEREIGLFFDDDELQDYERIDEPWLYE 153
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_ASHGO (Nucleoside diphosphate kinase OS=Ashbya gossypii GN=NDK1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.851e-37 Identity = 72/148 (48.65%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 247 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 E T+I +KPDGVQRGL+ I+SRFE ++L ++HY + KPFFPK++ Y+TSGP++ WEG VV R ++G+T+PL + PGTIRGD A+ GRNV HGSDS E+ +REI LWFK+ EL W Q W+ E Sbjct: 4 ERTFIAIKPDGVQRGLISKILSRFESRGYKLVGIKLVTPTENLLKQHYAEHVEKPFFPKMLAYMTSGPILATVWEGKDVVKQGRVILGATNPLNSAPGTIRGDFALDMGRNVCHGSDSVESAQREIDLWFKKEELVDWKLNQLSWIYE 151
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_ARCFU (Nucleoside diphosphate kinase OS=Archaeoglobus fulgidus GN=ndk PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.417e-37 Identity = 71/149 (47.65%), Postives = 95/149 (63.76%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T++MVKPDGVQRGLVG++I R E +++AE HY + KPFF L++YITSGPVV M EG + R L+G+T+P +A PGTIRGD + GRNVVH SDSP++ +REI L+F + E+ W A W+ E Sbjct: 1 MERTFVMVKPDGVQRGLVGEVIGRLERKGLKIVAMKMLWIAREMAENHYAEHREKPFFSALVDYITSGPVVAMVVEGKNAIKVVRTLVGATNPAEAAPGTIRGDFGLDVGRNVVHASDSPQSAEREISLFFSDDEIVNWEKADEDWIYE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_STAES (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ndk PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 3.157e-37 Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T++M+KPD VQR L+G+IISR E Q P +LAE+HY + KPF+ KLI +ITS PV M EG VA +RK+IGST+P +A PGTIRGD + GRN++HGSDS E+ +RE+ LWF E+ + + WL E Sbjct: 1 MERTFLMIKPDAVQRNLIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_STAEQ (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ndk PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.157e-37 Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E T++M+KPD VQR L+G+IISR E Q P +LAE+HY + KPF+ KLI +ITS PV M EG VA +RK+IGST+P +A PGTIRGD + GRN++HGSDS E+ +RE+ LWF E+ + + WL E Sbjct: 1 MERTFLMIKPDAVQRNLIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE 149
BLAST of CX295829 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.157e-37 Identity = 75/149 (50.34%), Postives = 101/149 (67.79%), Query Frame = 1 Query: 244 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIGLWFKEGELCQWTPAQAQWLRE 690 +E TY+MVKPDGVQRGL+G IIS+FE Q +++AE HY + KPFF L+++ITSGPVV M EG VV +AR+++G+T+PL+A PGTIR V GRN++HGSDS E+ +REIG++FK EL + A W+ E Sbjct: 1 MERTYLMVKPDGVQRGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGRNIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149 The following BLAST results are available for this feature:
BLAST of CX295829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295829 ID=CX295829; Name=CX295829; organism=Citrus clementina; type=EST; length=710bpback to top |