CX295830

Overview
NameCX295830
Unique NameCX295830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E13B_BRACM (Glucan endo-1,3-beta-glucosidase OS=Brassica campestris GN=BGL PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.943e-26
Identity = 72/200 (36.00%), Postives = 115/200 (57.50%), Query Frame = 2
Query:   80 GKVGINYGRIANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDN 679
            G++G+ +G++ NN+P+P +VV + K   I R++ Y  +   L AL  S+I  ++  PN +L + A  Q+  + WV+ N+ KY    + + ++VGNEV          L+ AM+N+  +L    L SN+KVS+   +G  +N+YPPS G FK D     L+P++ FL    S L+VN Y +F Y  N D +SL +AL + N
Sbjct:   25 GQIGVCFGQMGNNIPNPSEVVAMFKQYSIPRMRMYGPNPDALNALRGSNIEFILDVPNGDLKRLADSQAEANTWVRDNVQKYND-VRFKYISVGNEVKPGEPGAAA-LIQAMQNIDRALSAAGL-SNIKVSTTTFMGPSRNTYPPSRGRFK-DEYRNFLQPVIGFLVNKRSPLLVNIYTYFGY-MNRD-VSLQFALLQPN 218          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26
Identity = 67/197 (34.01%), Postives = 108/197 (54.82%), Query Frame = 2
Query:   86 VGINYGRIANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPA-TKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFR 673
            +G+ YG IANNLP   +VV+L +S+GI  ++ Y      + AL  S I +++   N +++  A   S   +WV AN+  Y+ A   I  +AVGNE+      +   ++ AM+N+  +L   +L   +KVS+ +    + NS+PPSS  F     +P +  +   L  T++ L+ N YP+FAYS N   I L+YA F+
Sbjct:    1 IGVCYGIIANNLPPRREVVQLYRSKGITNMRIYSVQPQAIRALHGSGIRLMLGTTNNDVAVLAGSLSAATSWVHANVKPYHSAGVTIRYIAVGNEITGGAAQS---ILAAMRNLNKALAAARL-GGIKVSTAVRFDVITNSFPPSSAVF----AQPYMVDIARHLASTNAPLLANVYPYFAYSGNPRDIKLNYATFQ 189          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E13B_MAIZE (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Zea mays PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24
Identity = 69/202 (34.16%), Postives = 112/202 (55.45%), Query Frame = 2
Query:   86 VGINYGRIANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQV 691
            +G+ YG   +NLP    VV+L +S GI  ++ Y  D+  L AL+ + I +++  PN +L+  A+D S    WVQ+N+ +    +    +AVGNEV       T  ++PAM+N+  +L    L  ++KVS+ +     Q  +PPS G+F    + P+     ++L+ T + L+ N YP+F+Y  N  +I L YALF  +PG V
Sbjct:   30 IGVCYGVNGDNLPPASDVVQLYQSNGINLLRIYFPDANPLNALSGTSIGLIMDVPNTDLASLASDPSAAAAWVQSNV-QASRRSACRYIAVGNEVSG---GDTGSILPAMQNLNAALANAGLGGSIKVSTAVQSDVTQ-GFPPSQGTFSQGYMAPS----RQYLQSTGAPLLSNVYPYFSYVGNPAQIDLKYALF-TSPGTV 221          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23
Identity = 67/195 (34.36%), Postives = 104/195 (53.33%), Query Frame = 2
Query:   86 VGINYGRIANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALF 670
            +G+  G + NNLP+P  VV L +S+ I  ++ Y+ +S VL AL+ + I+V++      L   A+  S    WV+AN+S  +P      +AV NEV      +T  ++PAM+NV  +L      S +KVS+ +      N+ PPS+G          L+P+L FL + +  L+ N YP+FAY  N   I L +A F
Sbjct:   26 IGVCNGVLGNNLPAPSDVVTLYRSKRIDAMRIYEPESKVLTALSGTGIAVLMDV-GPALPSLASSPSAAAAWVKANVSS-FPGVSFRYIAVRNEVMDSAGQST--ILPAMRNVQRALA--AAGSPIKVSTSVRFDVFNNTSPPSNGVLADK--SGFLRPILNFLARPARPLLANVYPYFAYKGNPRDIQLTFATF 212          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23
Identity = 68/202 (33.66%), Postives = 111/202 (54.95%), Query Frame = 2
Query:   86 VGINYGRIANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYY--PATKIEAVAVGNEVFADPKNTT--PFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQN--SYP-PSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALF 670
            +G+N+G +A +   P+ VV++LK   I +VK +D D   + ALA S + V+VA PN++L K         +WV+ N+++Y       I  VAVGNE F    N +      PA+ N+ N+L +  L ++VK + P+      +  S P PS+G F+ D+I   +  +++FL K ++ + +N YPF +   N D   L+YA F
Sbjct:   25 LGVNWGTMATHKLPPKTVVQMLKDNNINKVKLFDADETTMGALAGSGLEVMVAIPNDQL-KVMTSYDRAKDWVRKNVTRYNFDGGVNITFVAVGNEPFLKSYNGSFINLTFPALANIQNALNEAGLGNSVKATVPLNADVYDSPASNPVPSAGRFRPDII-GQMTQIVDFLGKNNAPITINIYPFLSLYGN-DDFPLNYAFF 223          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22
Identity = 64/200 (32.00%), Postives = 110/200 (55.00%), Query Frame = 2
Query:   86 VGINYGRIANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEA--VAVGNEVFADPKNTT--PFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQN-SYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALF 670
            +G+N+G  A +   P  VV LL+  GI +VK ++ DSA+L AL+ + I V+V  PN+ L+  A   +  + WV  N+S +  +  ++   VAVGNE F    N T     +PA++N+ ++++K  L + VKV+ P+     Q+ S  PS G F+ ++ +  L  +++FL    +   +N YPF +   N     +++A F
Sbjct:   27 IGVNWGSQARHPLPPATVVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLLAPLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLKAFNGTFEGITLPALQNIQSAIIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPEIRDLMLN-IVKFLSDNGAPFTINIYPFISL-YNDPNFPVEFAFF 224          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22
Identity = 58/160 (36.25%), Postives = 90/160 (56.25%), Query Frame = 2
Query:  200 VLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNT---TPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALF 670
            V  AL  S+I +++  P ++L ++  D S  + WVQ NI  ++P  K + +AVGN+V   P N     PF+ PAM+NVYN+L    L   +KVS+    G L N+YPP    F+ +     + P+++FL + +  L+ N YP+F +  N   + L YALF
Sbjct:    2 VFNALRGSNIEIILDVPLQDL-QSLTDPSRANGWVQDNIINHFPDVKFKYIAVGNKV--SPGNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANTYPPKDSIFRGE-FNSFINPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALF 157          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21
Identity = 68/205 (33.17%), Postives = 106/205 (51.71%), Query Frame = 2
Query:   86 VGINYGRIANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPA--TKIEAVAVGNEVFADPKN----TTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYP-PSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDN 679
            +G N+G  A++   P+ VV +L+  GI +VK +D +   L AL  S I V+V  PNE L+  A+     + WV  N+S +       I  VAVGNE F    N    +T F  PA++N+  +++K  L + VKV+ P+      +S   PS G F+++ I   +  +++FL +      VN YP+ +   N D   +DYA F  N
Sbjct:   22 IGANWGTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTF--PALRNIQIAIIKAGLQNQVKVTCPLNADVYDSSTTFPSGGDFRAN-IRDLMITIVKFLSENGGPFTVNIYPYISLYTNPD-FPVDYAFFDGN 222          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E13B_SOYBN (Glucan endo-1,3-beta-glucosidase (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17
Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = 2
Query:  224 DISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALF 670
            +I +++    E L       + TD WV   ++ Y      + +AVGNE+  +  N   +++ AM N+ N++   K    +KVS+ I    + NSYPP+ G F SD  EP +KP++ FL    + L+ N YP+FAY AN   I L YALF
Sbjct:    2 EIELIMDVAKETLQSLTDSNAATD-WVNKYVTPYSQDVNFKYIAVGNEIHPNT-NVAQYILSAMTNIQNAISSRKF--TIKVSTAIDSTLITNSYPPNDGVFTSDA-EPYIKPIINFLVSNGAPLLANVYPYFAY-ANDQSIPLAYALF 144          
BLAST of CX295830 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13
Identity = 36/95 (37.89%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  386 NTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALF 670
            ++ P L+PA++++YN+LV   L + +KVS+P A   + +++PPS   F +      + P+L+FL KT S LM+N YP++ Y  N   + LD  LF
Sbjct:   35 SSAPLLLPAIESLYNALVASNLHTQIKVSTPHAASIMLDTFPPSQAYF-NQTWHSIMVPLLQFLSKTGSPLMMNLYPYYVYMQNKGVVPLDNCLF 128          
The following BLAST results are available for this feature:
BLAST of CX295830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13B_BRACM1.943e-2636.00Glucan endo-1,3-beta-glucosidase OS=Brassica campe... [more]
E13D_HORVU7.383e-2634.01Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E13B_MAIZE2.375e-2434.16Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13C_HORVU4.479e-2334.36Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]
E138_ARATH9.978e-2333.66Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis ... [more]
E135_ARATH4.952e-2232.00Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis ... [more]
E13I_TOBAC6.468e-2236.25Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E136_ARATH1.103e-2133.17Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E13B_SOYBN3.673e-1735.57Glucan endo-1,3-beta-glucosidase (Fragment) OS=Gly... [more]
E131_ARATH5.488e-1337.89Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05076D01SK DroRLeaf1 Citrus clementina cDNA clone C05076D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295830 ID=CX295830; Name=CX295830; organism=Citrus clementina; type=EST; length=720bp
ATCAATGGCGACCCTTGCTGCATTCTCTTCCTTCTTCTTCTTCTTCTTCT
TCCTCGTAACCTTCGCTTCTGCAGATACTGGCAAGGTAGGTATAAATTAC
GGCAGAATTGCAAACAACTTACCGTCGCCGGAGAAAGTTGTGGAGCTGCT
GAAATCTCAAGGAATCGGCCGAGTTAAAACATACGACACTGACTCAGCCG
TACTCGCTGCACTCGCGAACTCGGACATAAGCGTCGTCGTTGCGTTCCCG
AATGAGGAACTCTCCAAGGCCGCAGCTGACCAGTCATTTACTGACAACTG
GGTCCAGGCCAATATCTCCAAGTACTACCCGGCAACGAAGATCGAGGCCG
TCGCAGTGGGCAACGAAGTCTTCGCAGACCCGAAGAACACGACGCCGTTT
CTCGTCCCCGCCATGAAGAACGTTTACAACTCCTTGGTTAAGTACAAGCT
TGATTCTAACGTTAAAGTCTCCTCTCCTATTGCTTTAGGTGCGTTACAAA
ATTCGTACCCGCCATCTTCCGGGTCGTTCAAATCGGATCTCATCGAGCCC
GCTTTGAAACCCATGTTGGAGTTTCTACGTAAGACGTCGTCGTATCTCAT
GGTTAATGCGTATCCTTTTTTCGCCTACTCTGCTAACGCGGATAAGATAT
CTTTAGACTACGCTCTGTTTAGGGATAATCCCGGTCAGGTGGATTCAGTA
ACGGGCTGAGTATAGTACCT
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