CX295832

Overview
NameCX295832
Unique NameCX295832
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14984 contig Ccv1_Contig14984:68..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.034e-26
Identity = 77/213 (36.15%), Postives = 115/213 (53.99%), Query Frame = 1
Query:   58 MELANMISVPMSLTAAIRLHVPDAIW-QGGANTPLSASQILTR--ILPSGGGDAENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            M+LA+   +PM+L  A+ L + + +  +  A   L+  +++ R  + P+    A+ + R+LRLL SY V     E ++   ER+YS   +GK L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + M   SV     +L+ Y GF+GV  LVDVGG  G  L  I   HP I +GINFDL
Sbjct:   21 MQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQI-KGINFDL 231          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 78/219 (35.62%), Postives = 120/219 (54.79%), Query Frame = 1
Query:   37 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            ++  L  M+LA+   +PM L +A+ L + + I + G    +S  +I ++ LP+   DA   L R+LRLL  Y + +      ++   +R Y L  + K LV + +G+S +   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+K LVDVGG  G  +  I+ K+P I +GINFDL
Sbjct:   17 EEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQ-LPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTI-KGINFDL 232          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 82/235 (34.89%), Postives = 121/235 (51.49%), Query Frame = 1
Query:    1 AVMEDNECRDGGKKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQ--GGANTPLSASQILTRILPSGGGD----AENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            AV+++  C        +  M+LA+   +PM+L  AI L + + + +  GG    L+  +++ R +P+   D    A  + R+LRLL SY V     E R+   ER+YS   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV     +LD Y GF+GV  LVDVGG  G  L  I  +HP I  G+NFDL
Sbjct:   10 AVVDEEAC--------MYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVAR-MPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHI-SGVNFDL 233          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26
Identity = 81/222 (36.49%), Postives = 120/222 (54.05%), Query Frame = 1
Query:   37 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQG---GANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            ++  L  M+LA+   +PM L AAI L V + + +    G+   +S ++I  + LP+   DA   L R+LRLL SY V +    E  +   ER Y L  + K L  + +G+S AP  L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  + + Y GF+ +  +VDVGG  G  L MI+ K+P I +GINFDL
Sbjct:   19 EEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQ-LPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSI-KGINFDL 237          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.702e-26
Identity = 76/215 (35.35%), Postives = 114/215 (53.02%), Query Frame = 1
Query:   49 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            L  M+LA+   +PM L  AI L + + I + G +  +S+S+++ ++      +A   + RI  LL SY V +    E  +   ER Y L  + K L+ +  G+S AP +L +    LM +W  + + VLD  I PF K +G  A+ Y+GK    N +    M   S   M  +++ Y+GF G+K LVDVGG  G  L MI  KH  + +GINFDL
Sbjct:   11 LFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGI-PFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSL-KGINFDL 223          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26
Identity = 78/212 (36.79%), Postives = 113/212 (53.30%), Query Frame = 1
Query:   58 MELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            M+L +   +PM L  AI L + + + + G    LS S I +  LP+   DA   L RILRLL SY +      +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +GINFDL
Sbjct:   23 MQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASH-LPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSI-KGINFDL 231          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.753e-26
Identity = 76/218 (34.86%), Postives = 115/218 (52.75%), Query Frame = 1
Query:   37 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            ++  L  M+LA+   +PM L AAI L + + + + G    LS  ++  ++          L RI RLL SY V +       +   ER Y L  + K LV + +G+S A   L +    LM +W  + +AVL+  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF+G++ +VDVGG  G  L MI+ K+P + +GINFDL
Sbjct:   18 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGI-PFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSM-KGINFDL 233          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.547e-25
Identity = 81/212 (38.21%), Postives = 114/212 (53.77%), Query Frame = 1
Query:   49 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENL-QRILRLLTSYGVFS-EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            L  M+LA+   +PM L +AI L + + I   G +T +S ++I +  LP+   DA  +  RILRLL+ Y V +   R    +R Y L  + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  ++ Y+G  P  N +  + MS  S   M  V   Y GF+G+  LVDVGG  G  L MIL K+P I   INFDL
Sbjct:    2 LFAMQLASASVLPMVLKSAIELDLLEII--RGQDTCMSPTEIASH-LPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTI-RCINFDL 208          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25
Identity = 74/218 (33.94%), Postives = 115/218 (52.75%), Query Frame = 1
Query:   37 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHR----EFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            ++  L  M+LA+   +PM L AAI L + + + + G    LS + + +++          L R+LRLL SY + +       +   ER Y L  + K L  + +G+S A   L +    L+ +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K M+  S   M  +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDL
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGI-PFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSI-KGINFDL 232          
BLAST of CX295832 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.410e-25
Identity = 74/210 (35.24%), Postives = 109/210 (51.90%), Query Frame = 1
Query:   49 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDL 678
            L+ + L+ +I +PM+L AAI L+V + I Q G +  LS S I+ +I       A +L RILR+L +  + S      G R Y L E  + LV   + +S  P +L     A++ ++  + + VL+  + PF + HG   + Y GK+  +N    +AM   S      V   Y GF  +K LVDVGG  G  L  I+ KHP I  GINF+L
Sbjct:   40 LSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTTKSG-RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHI-RGINFEL 247          
The following BLAST results are available for this feature:
BLAST of CX295832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
COMT1_SACOF1.034e-2636.15Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MEDSA2.303e-2635.62Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_MAIZE2.303e-2634.89Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_CLABR3.008e-2636.49Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ZINEL6.702e-2635.35Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT3_POPKI8.753e-2636.79Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_EUCGU8.753e-2634.86Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
OMT1_CHRAE2.547e-2538.21Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_ROSCH4.344e-2533.94Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
SMT_COPJA7.410e-2535.24(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]

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Properties
Property NameValue
Genbank descriptionC05076D03SK DroRLeaf1 Citrus clementina cDNA clone C05076D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295832 ID=CX295832; Name=CX295832; organism=Citrus clementina; type=EST; length=679bp
GCAGTAATGGAAGATAACGAGTGCAGAGATGGCGGGAAGAAGGTAAGACT
GGCCATAATGGAGCTGGCCAACATGATAAGTGTTCCCATGTCTCTAACCG
CTGCCATCCGTCTCCACGTACCGGATGCCATCTGGCAAGGTGGGGCCAAT
ACCCCTCTCTCCGCCTCCCAGATCTTGACACGTATCCTCCCATCCGGCGG
TGGGGACGCCGAGAACTTGCAACGTATCCTCCGCTTGCTCACCAGCTACG
GCGTGTTCTCGGAGCATCGCGAGTTTGGAGGCGAAAGGAAGTACAGCCTC
ACCGAGATCGGGAAATCCCTCGTTACTGATGCCGAGGGTCTATCGTACGC
GCCCTACGTGCTCCAGCATCACCAGGACGCGCTTATGAGCGCGTGGCCTT
TGGTGCACGAGGCCGTTCTGGACCCAACTATTGAGCCATTTGTGAAAGTC
CATGGCGAGCCGGCATATAGTTATTATGGGAAGAAGCCTGAAATGAACGG
CTTGATGCGAAAAGCCATGTCGGGAGTGTCCGTGCCGTTCATGACGTCCG
TTTTGGACGGTTACGATGGGTTCAAAGGTGTGAAGCGATTGGTTGATGTG
GGTGGGAGTGCAGGTGATTGCCTGAGGATGATATTACAGAAACATCCTTT
TATATGTGAAGGGATCAATTTTGATTTGC
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